RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 CYP2C19P33261 490 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 GCLCP48506 637 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 AGBL1Q96MI9 1066 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 PARPBPQ9NWS1 579 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 H2AFY2Q9P0M6 372 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 IQGAP2Q13576 1575 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 PCDH11XQ9BZA7 1347 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 PCDH11YQ9BZA8 1340 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 TMEM94Q12767 1356 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 DNAJC8O75937 253 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 STAU1O95793 577 aaKnown RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 ZNF286BP0CG31 522 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 MAPK4P31152 587 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 CAPZA1P52907 286 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 HYAL4Q2M3T9 481 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 LRRC74BQ6ZQY2 392 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 UNC5CLQ8IV45 518 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 PHC3Q8NDX5 983 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 NACC1Q96RE7 527 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 EIF3CQ99613 913 aaKnown RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 EHD2Q9NZN4 543 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 SUCOQ9UBS9 1254 aaKnown RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 TMA7Q9Y2S6 64 aaKnown RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 MAP3K5Q99683 1374 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 ARFGEF3Q5TH69 2177 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 M0QYV0 167 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 HLA-DQA2P01906 255 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 CHMLP26374 656 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 SLC8A1P32418 973 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 LPIN1Q14693 890 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 ERMARDQ5T6L9 678 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 ZBTB38Q8NAP3 1195 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 PSTPIP2Q9H939 334 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 KCNQ5Q9NR82 932 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 GGA3Q9NZ52 723 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 E9PBE3 544 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 PFDN6O15212 129 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 MSH4O15457 936 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 ACADMP11310 421 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 NT5DC4Q86YG4 428 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 SYNPOQ8N3V7 929 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 SH3TC2Q8TF17 1288 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 ZBTB10Q96DT7 871 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 CPB2Q96IY4 423 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 ARMC7Q9H6L4 198 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 MRGBPQ9NV56 204 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 ZFATQ9P243 1243 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 GRK3P35626 688 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 GCKRQ14397 625 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 KIAA1755Q5JYT7 1200 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 FAM178BQ8IXR5 827 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 NT5C1BQ96P26 610 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 POLR1BQ9H9Y6 1135 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 ZNF624Q9P2J8 865 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 NCDNQ9UBB6 729 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 PACSIN2Q9UNF0 486 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 SH3GLB1Q9Y371 365 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 NSD2O96028 1365 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 IGF1RP08069 1367 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 PLEKHG2Q9H7P9 1386 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 DKC1O60832 514 aaKnown RBP eCLIP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 ALOX15P16050 662 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 ADAM9Q13443 819 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 HLA-DQA1Q5Y7H0 255 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 CRLF3Q8IUI8 442 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 BRSK2Q8IWQ3 736 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 REXO1Q8N1G1 1221 aaKnown RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 PDGFDQ9GZP0 370 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 PCM1Q15154 2024 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 A0A0G2JND7 137 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 RNF40O75150 1001 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 NR5A1Q13285 461 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 PLA2G4EQ3MJ16 856 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 TTC23LQ6PF05 361 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 HPS6Q86YV9 775 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 CHURC1Q8WUH1 139 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 HES6Q96HZ4 224 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 TEKT5Q96M29 485 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 EIF2AQ9BY44 585 aaKnown RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 GGA2Q9UJY4 613 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 L1RE1Q9UN81 338 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 THOC2Q8NI27 1593 aaKnown RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 ALPK2Q86TB3 2170 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 LOC102724428A0A0B4J2F2 783 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 BHMG1C9JSJ3 638 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 PRPSAP2O60256 369 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 MT-ND3P03897 115 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 GPC1P35052 558 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 NNMTP40261 264 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 SIK1P57059 783 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 ANKFN1Q8N957 763 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 ZC3H15Q8WU90 426 aaKnown RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 CYGBQ8WWM9 190 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 CCDC124Q96CT7 223 aaKnown RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 SOHLH2Q9NX45 425 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 CRLS1Q9UJA2 301 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 FAN1Q9Y2M0 1017 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 SNX14Q9Y5W7 946 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms