RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 ACAD9Q9H845 621 aa9.62□□□□□ -0.87
AL049839.2-201ENST00000553947 ABCF3Q9NUQ8 709 aa9.62□□□□□ -0.87
AL049839.2-201ENST00000553947 PCMTD2Q9NV79 361 aa9.62□□□□□ -0.87
AL049839.2-201ENST00000553947 SLC9A2Q9UBY0 812 aa9.62□□□□□ -0.87
AL049839.2-201ENST00000553947 SEPT9Q9UHD8 586 aaPredicted RBP9.62□□□□□ -0.87
AL049839.2-201ENST00000553947 PNMA2Q9UL42 364 aa9.62□□□□□ -0.87
AL049839.2-201ENST00000553947 NR2E1Q9Y466 385 aa9.62□□□□□ -0.87
AL049839.2-201ENST00000553947 AFG3L2Q9Y4W6 797 aa9.62□□□□□ -0.87
AL049839.2-201ENST00000553947 LCTP09848 1927 aa9.62□□□□□ -0.87
AL049839.2-201ENST00000553947 TLDC2A0PJX2 215 aa9.62□□□□□ -0.87
AL049839.2-201ENST00000553947 DCDC2CA8MYV0 355 aa9.62□□□□□ -0.87
AL049839.2-201ENST00000553947 C19orf81C9J6K1 198 aa9.62□□□□□ -0.87
AL049839.2-201ENST00000553947 DDX3YO15523 660 aaKnown RBP9.62□□□□□ -0.87
AL049839.2-201ENST00000553947 CYP26A1O43174 497 aa9.62□□□□□ -0.87
AL049839.2-201ENST00000553947 MMEP08473 750 aa9.62□□□□□ -0.87
AL049839.2-201ENST00000553947 MSH2P43246 934 aa9.62□□□□□ -0.87
AL049839.2-201ENST00000553947 IFNAR2P48551 515 aa9.62□□□□□ -0.87
AL049839.2-201ENST00000553947 RAD23BP54727 409 aa9.62□□□□□ -0.87
AL049839.2-201ENST00000553947 ERVK-9P63128 1117 aa9.62□□□□□ -0.87
AL049839.2-201ENST00000553947 PRKCEQ02156 737 aa9.62□□□□□ -0.87
AL049839.2-201ENST00000553947 CNTN2Q02246 1040 aa9.62□□□□□ -0.87
AL049839.2-201ENST00000553947 CETN1Q12798 172 aa9.62□□□□□ -0.87
AL049839.2-201ENST00000553947 SLC47A2Q86VL8 602 aa9.62□□□□□ -0.87
AL049839.2-201ENST00000553947 APOBEC3FQ8IUX4 373 aaKnown RBP9.62□□□□□ -0.87
AL049839.2-201ENST00000553947 PPM1KQ8N3J5 372 aa9.62□□□□□ -0.87
AL049839.2-201ENST00000553947 RASGEF1CQ8N431 466 aa9.62□□□□□ -0.87
AL049839.2-201ENST00000553947 SLC17A8Q8NDX2 589 aa9.62□□□□□ -0.87
AL049839.2-201ENST00000553947 TAS1R2Q8TE23 839 aa9.62□□□□□ -0.87
AL049839.2-201ENST00000553947 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.62□□□□□ -0.874e-9■■□□□ 11.8
AL049839.2-201ENST00000553947 GPRC5DQ9NZD1 345 aa9.62□□□□□ -0.87
AL049839.2-201ENST00000553947 ARID2Q68CP9 1835 aa9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 ANKRD62A6NC57 917 aa9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 SMIM23A6NLE4 172 aa9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 SPATA31C2B4DYI2 1134 aa9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 PGRMC1O00264 195 aaKnown RBP9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 ATP2A1O14983 1001 aa9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 MAFGO15525 162 aa9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 PFDN1O60925 122 aa9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 NPTXRO95502 500 aa9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 CALCAP01258 141 aa9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 FTLP02792 175 aaPredicted RBP9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 KRT16P08779 473 aa9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 RFX1P22670 979 aa9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 TNNC1P63316 161 aa9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 ZNF844Q08AG5 666 aa9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 TREML2Q5T2D2 321 aa9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 OTUD6AQ7L8S5 288 aa9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 DDX42Q86XP3 938 aaKnown RBP eCLIP9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 SYCE1Q8N0S2 351 aa9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 MREGQ8N565 214 aa9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 IWS1Q96ST2 819 aa9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 CCDC113Q9H0I3 377 aa9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 CYP26B1Q9NR63 512 aa9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 NOCTQ9UK39 431 aaKnown RBP9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 AMFRQ9UKV5 643 aa9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 EXOC7Q9UPT5 735 aa9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 SART1O43290 800 aaKnown RBP9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 ATMINO43313 823 aaPredicted RBP9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 PSAPP07602 524 aa9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 ECHS1P30084 290 aa9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 MCCD1P59942 119 aaPredicted RBP9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 SNRPFP62306 86 aaKnown RBP9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 MTERF2Q49AM1 385 aa9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 AADACL2Q6P093 401 aa9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 LRIG3Q6UXM1 1119 aa9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 SDCCAG8Q86SQ7 713 aaPredicted RBP9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 FAM71AQ8IYT1 594 aa9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 C1orf131Q8NDD1 294 aaKnown RBP9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 HELQQ8TDG4 1101 aa9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 EPS8L1Q8TE68 723 aa9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 SPIRE2Q8WWL2 714 aa9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 POMGNT1Q8WZA1 660 aa9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 DHX38Q92620 1227 aaKnown RBP9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 KIFAP3Q92845 792 aa9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 ATP6V0A1Q93050 837 aa9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 FBXL18Q96ME1 805 aa9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 GALNT8Q9NY28 637 aa9.61□□□□□ -0.87
AL049839.2-201ENST00000553947 KRIT1O00522 736 aa9.6□□□□□ -0.87
AL049839.2-201ENST00000553947 USP2O75604 605 aaPredicted RBP9.6□□□□□ -0.87
AL049839.2-201ENST00000553947 DLATP10515 647 aaKnown RBP9.6□□□□□ -0.87
AL049839.2-201ENST00000553947 COPB2P35606 906 aa9.6□□□□□ -0.87
AL049839.2-201ENST00000553947 MAGEA10P43363 369 aaPredicted RBP9.6□□□□□ -0.87
AL049839.2-201ENST00000553947 WNT7BP56706 349 aa9.6□□□□□ -0.87
AL049839.2-201ENST00000553947 PRPF4BQ13523 1007 aaKnown RBP9.6□□□□□ -0.87
AL049839.2-201ENST00000553947 TSNAXIP1Q2TAA8 658 aa9.6□□□□□ -0.87
AL049839.2-201ENST00000553947 RASIP1Q5U651 963 aa9.6□□□□□ -0.87
AL049839.2-201ENST00000553947 KRT39Q6A163 491 aa9.6□□□□□ -0.87
AL049839.2-201ENST00000553947 CYFIP1Q7L576 1253 aa9.6□□□□□ -0.87
AL049839.2-201ENST00000553947 CPNE8Q86YQ8 564 aa9.6□□□□□ -0.87
AL049839.2-201ENST00000553947 LRRC34Q8IZ02 419 aa9.6□□□□□ -0.87
AL049839.2-201ENST00000553947 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.6□□□□□ -0.871e-28■□□□□ 8.1
AL049839.2-201ENST00000553947 MFSD14AQ96MC6 490 aa9.6□□□□□ -0.87
AL049839.2-201ENST00000553947 PI4K2AQ9BTU6 479 aa9.6□□□□□ -0.87
AL049839.2-201ENST00000553947 NSRP1Q9H0G5 558 aaKnown RBP9.6□□□□□ -0.87
AL049839.2-201ENST00000553947 POLR3FQ9H1D9 316 aaPredicted RBP9.6□□□□□ -0.87
AL049839.2-201ENST00000553947 ISCUQ9H1K1 167 aa9.6□□□□□ -0.87
AL049839.2-201ENST00000553947 R3HDMLQ9H3Y0 253 aa9.6□□□□□ -0.87
AL049839.2-201ENST00000553947 TMOD4Q9NZQ9 345 aa9.6□□□□□ -0.87
AL049839.2-201ENST00000553947 ADAM22Q9P0K1 906 aa9.6□□□□□ -0.87
AL049839.2-201ENST00000553947 AMACRQ9UHK6 382 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms