RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 RSAD1Q9HA92 442 aa12.65□□□□□ -0.38
NEK9-202ENST00000553823 PLAGL2Q9UPG8 496 aa12.65□□□□□ -0.38
NEK9-202ENST00000553823 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.65□□□□□ -0.38
NEK9-202ENST00000553823 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.65□□□□□ -0.38
NEK9-202ENST00000553823 TRIM43BA6NCK2 446 aa12.64□□□□□ -0.39
NEK9-202ENST00000553823 ARL5CA6NH57 179 aa12.64□□□□□ -0.39
NEK9-202ENST00000553823 PTGESO14684 152 aa12.64□□□□□ -0.39
NEK9-202ENST00000553823 SKILP12757 684 aa12.64□□□□□ -0.39
NEK9-202ENST00000553823 RAG1P15918 1043 aa12.64□□□□□ -0.39
NEK9-202ENST00000553823 CYP3A5P20815 502 aa12.64□□□□□ -0.39
NEK9-202ENST00000553823 TBXAS1P24557 533 aaPredicted RBP12.64□□□□□ -0.39
NEK9-202ENST00000553823 POLR2BP30876 1174 aaKnown RBP12.64□□□□□ -0.39
NEK9-202ENST00000553823 ATICP31939 592 aa12.64□□□□□ -0.39
NEK9-202ENST00000553823 STAT1P42224 750 aa12.64□□□□□ -0.39
NEK9-202ENST00000553823 GUCY2FP51841 1108 aa12.64□□□□□ -0.39
NEK9-202ENST00000553823 MEA1Q16626 185 aa12.64□□□□□ -0.39
NEK9-202ENST00000553823 ARHGAP44Q17R89 818 aa12.64□□□□□ -0.39
NEK9-202ENST00000553823 SPOPLQ6IQ16 392 aa12.64□□□□□ -0.39
NEK9-202ENST00000553823 WDR59Q6PJI9 974 aa12.64□□□□□ -0.39
NEK9-202ENST00000553823 CYP26C1Q6V0L0 522 aa12.64□□□□□ -0.39
NEK9-202ENST00000553823 TMTC1Q8IUR5 882 aa12.64□□□□□ -0.39
NEK9-202ENST00000553823 TMEM139Q8IV31 216 aa12.64□□□□□ -0.39
NEK9-202ENST00000553823 FMNL3Q8IVF7 1028 aa12.64□□□□□ -0.39
NEK9-202ENST00000553823 GSTCDQ8NEC7 633 aa12.64□□□□□ -0.39
NEK9-202ENST00000553823 KAT5Q92993 513 aa12.64□□□□□ -0.39
NEK9-202ENST00000553823 C18orf25Q96B23 403 aaPredicted RBP12.64□□□□□ -0.39
NEK9-202ENST00000553823 ELMO3Q96BJ8 720 aa12.64□□□□□ -0.39
NEK9-202ENST00000553823 TRIM43Q96BQ3 446 aaPredicted RBP12.64□□□□□ -0.39
NEK9-202ENST00000553823 KREMEN1Q96MU8 473 aa12.64□□□□□ -0.39
NEK9-202ENST00000553823 PPP1R10Q96QC0 940 aaKnown RBP12.64□□□□□ -0.39
NEK9-202ENST00000553823 XYLT2Q9H1B5 865 aa12.64□□□□□ -0.39
NEK9-202ENST00000553823 ELAC1Q9H777 363 aaKnown RBP12.64□□□□□ -0.39
NEK9-202ENST00000553823 APOBEC3GQ9HC16 384 aaKnown RBP12.64□□□□□ -0.39
NEK9-202ENST00000553823 RNF19AQ9NV58 838 aa12.64□□□□□ -0.39
NEK9-202ENST00000553823 SLC38A7Q9NVC3 462 aa12.64□□□□□ -0.39
NEK9-202ENST00000553823 AIPL1Q9NZN9 384 aa12.64□□□□□ -0.39
NEK9-202ENST00000553823 TUBGCP4Q9UGJ1 667 aa12.64□□□□□ -0.39
NEK9-202ENST00000553823 AGAP1Q9UPQ3 857 aa12.64□□□□□ -0.39
NEK9-202ENST00000553823 FARP1Q9Y4F1 1045 aaPredicted RBP12.64□□□□□ -0.39
NEK9-202ENST00000553823 NUB1Q9Y5A7 615 aa12.64□□□□□ -0.39
NEK9-202ENST00000553823 F8VZ95 297 aa12.63□□□□□ -0.39
NEK9-202ENST00000553823 THP07101 528 aa12.63□□□□□ -0.39
NEK9-202ENST00000553823 SOX5P35711 763 aa12.63□□□□□ -0.39
NEK9-202ENST00000553823 CDK17Q00537 523 aa12.63□□□□□ -0.39
NEK9-202ENST00000553823 CUL2Q13617 745 aa12.63□□□□□ -0.39
NEK9-202ENST00000553823 ASIC2Q16515 512 aa12.63□□□□□ -0.39
NEK9-202ENST00000553823 TCTN1Q2MV58 587 aa12.63□□□□□ -0.39
NEK9-202ENST00000553823 ZNF667Q5HYK9 610 aa12.63□□□□□ -0.39
NEK9-202ENST00000553823 E4F1Q66K89 784 aaPredicted RBP12.63□□□□□ -0.39
NEK9-202ENST00000553823 CNKSR3Q6P9H4 555 aa12.63□□□□□ -0.39
NEK9-202ENST00000553823 TMEM130Q8N3G9 435 aa12.63□□□□□ -0.39
NEK9-202ENST00000553823 SHC3Q92529 594 aa12.63□□□□□ -0.39
NEK9-202ENST00000553823 JAKMIP2Q96AA8 810 aa12.63□□□□□ -0.39
NEK9-202ENST00000553823 HPDLQ96IR7 371 aa12.63□□□□□ -0.39
NEK9-202ENST00000553823 FAXDC2Q96IV6 333 aa12.63□□□□□ -0.39
NEK9-202ENST00000553823 GPR88Q9GZN0 384 aa12.63□□□□□ -0.39
NEK9-202ENST00000553823 NIF3L1Q9GZT8 377 aa12.63□□□□□ -0.39
NEK9-202ENST00000553823 VRTNQ9H8Y1 702 aa12.63□□□□□ -0.39
NEK9-202ENST00000553823 TMEM161AQ9NX61 479 aa12.63□□□□□ -0.39
NEK9-202ENST00000553823 MIOSQ9NXC5 875 aa12.63□□□□□ -0.39
NEK9-202ENST00000553823 PCDHB7Q9Y5E2 793 aa12.63□□□□□ -0.39
NEK9-202ENST00000553823 ANO9A1A5B4 782 aa12.62□□□□□ -0.39
NEK9-202ENST00000553823 FOXN3O00409 490 aaPredicted RBP12.62□□□□□ -0.39
NEK9-202ENST00000553823 INPPL1O15357 1258 aa12.62□□□□□ -0.39
NEK9-202ENST00000553823 ARHGAP6O43182 974 aa12.62□□□□□ -0.39
NEK9-202ENST00000553823 OFD1O75665 1012 aa12.62□□□□□ -0.39
NEK9-202ENST00000553823 GABBR2O75899 941 aa12.62□□□□□ -0.39
NEK9-202ENST00000553823 STAU1O95793 577 aaKnown RBP12.62□□□□□ -0.39
NEK9-202ENST00000553823 SERPING1P05155 500 aa12.62□□□□□ -0.39
NEK9-202ENST00000553823 CCDC172P0C7W6 258 aa12.62□□□□□ -0.39
NEK9-202ENST00000553823 P4HA1P13674 534 aa12.62□□□□□ -0.39
NEK9-202ENST00000553823 FERP16591 822 aa12.62□□□□□ -0.39
NEK9-202ENST00000553823 ITGB8P26012 769 aa12.62□□□□□ -0.39
NEK9-202ENST00000553823 SCNN1GP51170 649 aa12.62□□□□□ -0.39
NEK9-202ENST00000553823 AFF1P51825 1210 aaKnown RBP12.62□□□□□ -0.39
NEK9-202ENST00000553823 SOX4Q06945 474 aaPredicted RBP12.62□□□□□ -0.39
NEK9-202ENST00000553823 MYO1EQ12965 1108 aa12.62□□□□□ -0.39
NEK9-202ENST00000553823 GRIK3Q13003 919 aa12.62□□□□□ -0.39
NEK9-202ENST00000553823 IKBKEQ14164 716 aa12.62□□□□□ -0.39
NEK9-202ENST00000553823 C9orf57Q5W0N0 161 aa12.62□□□□□ -0.39
NEK9-202ENST00000553823 MFSD5Q6N075 450 aa12.62□□□□□ -0.39
NEK9-202ENST00000553823 GLB1LQ6UWU2 654 aa12.62□□□□□ -0.39
NEK9-202ENST00000553823 RPUSD2Q8IZ73 545 aaKnown RBP12.62□□□□□ -0.39
NEK9-202ENST00000553823 TMEM199Q8N511 208 aa12.62□□□□□ -0.39
NEK9-202ENST00000553823 LRRC52Q8N7C0 313 aa12.62□□□□□ -0.39
NEK9-202ENST00000553823 VWCEQ96DN2 955 aa12.62□□□□□ -0.39
NEK9-202ENST00000553823 CHP1Q99653 195 aa12.62□□□□□ -0.39
NEK9-202ENST00000553823 PRKAG2Q9UGJ0 569 aa12.62□□□□□ -0.39
NEK9-202ENST00000553823 INPP5FQ9Y2H2 1132 aa12.62□□□□□ -0.39
NEK9-202ENST00000553823 ZKSCAN5Q9Y2L8 839 aa12.62□□□□□ -0.39
NEK9-202ENST00000553823 MKI67P46013 3256 aaKnown RBP12.62□□□□□ -0.39
NEK9-202ENST00000553823 LTBP2Q14767 1821 aa12.61□□□□□ -0.39
NEK9-202ENST00000553823 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.61□□□□□ -0.39
NEK9-202ENST00000553823 PIRO00625 290 aa12.61□□□□□ -0.39
NEK9-202ENST00000553823 GFPT2O94808 682 aa12.61□□□□□ -0.39
NEK9-202ENST00000553823 POMCP01189 267 aa12.61□□□□□ -0.39
NEK9-202ENST00000553823 PFKMP08237 780 aa12.61□□□□□ -0.39
NEK9-202ENST00000553823 PNMA6AP0CW24 399 aaPredicted RBP12.61□□□□□ -0.39
NEK9-202ENST00000553823 LRPAP1P30533 357 aa12.61□□□□□ -0.39
NEK9-202ENST00000553823 PNPLA4P41247 253 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms