RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 VOPP1Q96AW1 172 aa5.34□□□□□ -1.55
SCFD1-210ENST00000553693 NACC2Q96BF6 587 aa5.34□□□□□ -1.55
SCFD1-210ENST00000553693 MTMR8Q96EF0 704 aa5.34□□□□□ -1.55
SCFD1-210ENST00000553693 PTCD3Q96EY7 689 aaKnown RBP5.34□□□□□ -1.55
SCFD1-210ENST00000553693 FAXDC2Q96IV6 333 aa5.34□□□□□ -1.55
SCFD1-210ENST00000553693 BBC3Q96PG8 261 aaPredicted RBP5.34□□□□□ -1.55
SCFD1-210ENST00000553693 AIFM2Q9BRQ8 373 aa5.34□□□□□ -1.55
SCFD1-210ENST00000553693 DUSP26Q9BV47 211 aa5.34□□□□□ -1.55
SCFD1-210ENST00000553693 PACSIN1Q9BY11 444 aa5.34□□□□□ -1.55
SCFD1-210ENST00000553693 UNKLQ9H9P5 680 aaKnown RBP5.34□□□□□ -1.55
SCFD1-210ENST00000553693 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.34□□□□□ -1.55
SCFD1-210ENST00000553693 TLK1Q9UKI8 766 aa5.34□□□□□ -1.55
SCFD1-210ENST00000553693 TRHDEQ9UKU6 1024 aa5.34□□□□□ -1.55
SCFD1-210ENST00000553693 SHTN1A0MZ66 631 aa5.33□□□□□ -1.56
SCFD1-210ENST00000553693 CCDC78A2IDD5 438 aa5.33□□□□□ -1.56
SCFD1-210ENST00000553693 GRM6O15303 877 aa5.33□□□□□ -1.56
SCFD1-210ENST00000553693 FCER1AP12319 257 aa5.33□□□□□ -1.56
SCFD1-210ENST00000553693 CD38P28907 300 aa5.33□□□□□ -1.56
SCFD1-210ENST00000553693 GUCY2FP51841 1108 aa5.33□□□□□ -1.56
SCFD1-210ENST00000553693 ELLP55199 621 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-210ENST00000553693 ITKQ08881 620 aa5.33□□□□□ -1.56
SCFD1-210ENST00000553693 GEN1Q17RS7 908 aa5.33□□□□□ -1.56
SCFD1-210ENST00000553693 GADL1Q6ZQY3 521 aa5.33□□□□□ -1.56
SCFD1-210ENST00000553693 RD3Q7Z3Z2 195 aa5.33□□□□□ -1.56
SCFD1-210ENST00000553693 AOPEPQ8N6M6 819 aa5.33□□□□□ -1.56
SCFD1-210ENST00000553693 DCBLD1Q8N8Z6 715 aa5.33□□□□□ -1.56
SCFD1-210ENST00000553693 SIMC1Q8NDZ2 872 aa5.33□□□□□ -1.56
SCFD1-210ENST00000553693 IFI44Q8TCB0 444 aa5.33□□□□□ -1.56
SCFD1-210ENST00000553693 KCTD5Q9NXV2 234 aa5.33□□□□□ -1.56
SCFD1-210ENST00000553693 HSFX1Q9UBD0 423 aa5.33□□□□□ -1.56
SCFD1-210ENST00000553693 NEU2Q9Y3R4 380 aa5.33□□□□□ -1.56
SCFD1-210ENST00000553693 COX11Q9Y6N1 276 aa5.33□□□□□ -1.56
SCFD1-210ENST00000553693 SPATA31A6Q5VVP1 1343 aa5.32□□□□□ -1.56
SCFD1-210ENST00000553693 CD1AP06126 327 aa5.32□□□□□ -1.56
SCFD1-210ENST00000553693 CDK11BP21127 795 aaKnown RBP5.32□□□□□ -1.56
SCFD1-210ENST00000553693 PLA2G5P39877 138 aa5.32□□□□□ -1.56
SCFD1-210ENST00000553693 MRPS21P82921 87 aaKnown RBP5.32□□□□□ -1.56
SCFD1-210ENST00000553693 KIF23Q02241 960 aaPredicted RBP5.32□□□□□ -1.56
SCFD1-210ENST00000553693 ZNF844Q08AG5 666 aa5.32□□□□□ -1.56
SCFD1-210ENST00000553693 ZNF169Q14929 603 aaPredicted RBP5.32□□□□□ -1.56
SCFD1-210ENST00000553693 CCDC142Q17RM4 750 aa5.32□□□□□ -1.56
SCFD1-210ENST00000553693 SP5Q6BEB4 398 aaPredicted RBP5.32□□□□□ -1.56
SCFD1-210ENST00000553693 CLNKQ7Z7G1 428 aa5.32□□□□□ -1.56
SCFD1-210ENST00000553693 LNX2Q8N448 690 aa5.32□□□□□ -1.56
SCFD1-210ENST00000553693 ACTRT2Q8TDY3 377 aa5.32□□□□□ -1.56
SCFD1-210ENST00000553693 SSH3Q8TE77 659 aa5.32□□□□□ -1.56
SCFD1-210ENST00000553693 RAB24Q969Q5 203 aa5.32□□□□□ -1.56
SCFD1-210ENST00000553693 HEPHQ9BQS7 1158 aa5.32□□□□□ -1.56
SCFD1-210ENST00000553693 KIAA1586Q9HCI6 787 aa5.32□□□□□ -1.56
SCFD1-210ENST00000553693 JKAMPQ9P055 326 aa5.32□□□□□ -1.56
SCFD1-210ENST00000553693 CDYLQ9Y232 598 aa5.32□□□□□ -1.56
SCFD1-210ENST00000553693 PCDHA13Q9Y5I0 950 aa5.32□□□□□ -1.56
SCFD1-210ENST00000553693 CFAP20Q9Y6A4 193 aaKnown RBP5.32□□□□□ -1.56
SCFD1-210ENST00000553693 A0A1W2PS29 197 aa5.31□□□□□ -1.56
SCFD1-210ENST00000553693 ALG1L2C9J202 215 aa5.31□□□□□ -1.56
SCFD1-210ENST00000553693 ORC4O43929 436 aa5.31□□□□□ -1.56
SCFD1-210ENST00000553693 SLC6A4P31645 630 aa5.31□□□□□ -1.56
SCFD1-210ENST00000553693 MTMR1Q13613 665 aa5.31□□□□□ -1.56
SCFD1-210ENST00000553693 FBXO42Q6P3S6 717 aa5.31□□□□□ -1.56
SCFD1-210ENST00000553693 ZNF365Q70YC5 407 aa5.31□□□□□ -1.56
SCFD1-210ENST00000553693 PNMA8AQ86V59 439 aaPredicted RBP5.31□□□□□ -1.56
SCFD1-210ENST00000553693 TEKT5Q96M29 485 aa5.31□□□□□ -1.56
SCFD1-210ENST00000553693 R3HDMLQ9H3Y0 253 aa5.31□□□□□ -1.56
SCFD1-210ENST00000553693 MAN1C1Q9NR34 630 aa5.31□□□□□ -1.56
SCFD1-210ENST00000553693 CALCOCO1Q9P1Z2 691 aa5.31□□□□□ -1.56
SCFD1-210ENST00000553693 IPPQ9Y573 584 aa5.31□□□□□ -1.56
SCFD1-210ENST00000553693 CCDC154A6NI56 674 aa5.3□□□□□ -1.56
SCFD1-210ENST00000553693 MASP2O00187 686 aa5.3□□□□□ -1.56
SCFD1-210ENST00000553693 HTRA2O43464 458 aaPredicted RBP5.3□□□□□ -1.56
SCFD1-210ENST00000553693 PEX1O43933 1283 aa5.3□□□□□ -1.56
SCFD1-210ENST00000553693 SLC43A1O75387 559 aa5.3□□□□□ -1.56
SCFD1-210ENST00000553693 AGFG2O95081 481 aa5.3□□□□□ -1.56
SCFD1-210ENST00000553693 KCNA2P16389 499 aa5.3□□□□□ -1.56
SCFD1-210ENST00000553693 SIM1P81133 766 aaPredicted RBP5.3□□□□□ -1.56
SCFD1-210ENST00000553693 PIGFQ07326 219 aa5.3□□□□□ -1.56
SCFD1-210ENST00000553693 EFCAB2Q5VUJ9 269 aa5.3□□□□□ -1.56
SCFD1-210ENST00000553693 KRTAP5-11Q6L8G4 156 aa5.3□□□□□ -1.56
SCFD1-210ENST00000553693 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.3□□□□□ -1.56
SCFD1-210ENST00000553693 BOLLQ8N9W6 283 aaKnown RBP5.3□□□□□ -1.56
SCFD1-210ENST00000553693 IL17RDQ8NFM7 739 aa5.3□□□□□ -1.56
SCFD1-210ENST00000553693 RSAD1Q9HA92 442 aa5.3□□□□□ -1.56
SCFD1-210ENST00000553693 INTS13Q9NVM9 706 aa5.3□□□□□ -1.56
SCFD1-210ENST00000553693 SBNO2Q9Y2G9 1366 aa5.29□□□□□ -1.56
SCFD1-210ENST00000553693 PRAMEF33A0A0G2JMD5 474 aa5.29□□□□□ -1.56
SCFD1-210ENST00000553693 KRTAP29-1A8MX34 341 aaPredicted RBP5.29□□□□□ -1.56
SCFD1-210ENST00000553693 GABRDO14764 452 aa5.29□□□□□ -1.56
SCFD1-210ENST00000553693 PCDHGA12O60330 932 aa5.29□□□□□ -1.56
SCFD1-210ENST00000553693 PRAMEF10O60809 474 aa5.29□□□□□ -1.56
SCFD1-210ENST00000553693 ZFPL1O95159 310 aa5.29□□□□□ -1.56
SCFD1-210ENST00000553693 C1RP00736 705 aa5.29□□□□□ -1.56
SCFD1-210ENST00000553693 ANXA1P04083 346 aa5.29□□□□□ -1.56
SCFD1-210ENST00000553693 IL12RB1P42701 662 aa5.29□□□□□ -1.56
SCFD1-210ENST00000553693 RARRES1P49788 294 aa5.29□□□□□ -1.56
SCFD1-210ENST00000553693 CDKN1CP49918 316 aaPredicted RBP5.29□□□□□ -1.56
SCFD1-210ENST00000553693 ADKP55263 362 aaKnown RBP5.29□□□□□ -1.56
SCFD1-210ENST00000553693 RPS7P62081 194 aaKnown RBP5.29□□□□□ -1.56
SCFD1-210ENST00000553693 TLE1Q04724 770 aa5.29□□□□□ -1.56
SCFD1-210ENST00000553693 UAP1L1Q3KQV9 507 aa5.29□□□□□ -1.56
SCFD1-210ENST00000553693 C3orf36Q3SXR2 165 aa5.29□□□□□ -1.56
SCFD1-210ENST00000553693 UTP14CQ5TAP6 766 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms