RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 PIK3CGP48736 1102 aa6.09□□□□□ -1.43
SCFD1-209ENST00000553280 ADCY7P51828 1080 aa6.09□□□□□ -1.43
SCFD1-209ENST00000553280 MAPK10P53779 464 aa6.09□□□□□ -1.43
SCFD1-209ENST00000553280 SOX8P57073 446 aa6.09□□□□□ -1.43
SCFD1-209ENST00000553280 HTRA4P83105 476 aaPredicted RBP6.09□□□□□ -1.43
SCFD1-209ENST00000553280 PMS2P11Q13670 270 aa6.09□□□□□ -1.43
SCFD1-209ENST00000553280 ATP2B3Q16720 1220 aa6.09□□□□□ -1.43
SCFD1-209ENST00000553280 ARL13BQ3SXY8 428 aa6.09□□□□□ -1.43
SCFD1-209ENST00000553280 GAGE13Q4V321 117 aa6.09□□□□□ -1.43
SCFD1-209ENST00000553280 FAM47AQ5JRC9 791 aa6.09□□□□□ -1.43
SCFD1-209ENST00000553280 OTUD7BQ6GQQ9 843 aa6.09□□□□□ -1.43
SCFD1-209ENST00000553280 PGBD2Q6P3X8 592 aa6.09□□□□□ -1.43
SCFD1-209ENST00000553280 TLDC1Q6P9B6 456 aa6.09□□□□□ -1.43
SCFD1-209ENST00000553280 PLXDC1Q8IUK5 500 aa6.09□□□□□ -1.43
SCFD1-209ENST00000553280 IL17RDQ8NFM7 739 aa6.09□□□□□ -1.43
SCFD1-209ENST00000553280 FBXO18Q8NFZ0 1043 aa6.09□□□□□ -1.43
SCFD1-209ENST00000553280 OR6B3Q8NGW1 331 aa6.09□□□□□ -1.43
SCFD1-209ENST00000553280 CDC5LQ99459 802 aaKnown RBP6.09□□□□□ -1.43
SCFD1-209ENST00000553280 P2RX7Q99572 595 aaKnown RBP6.09□□□□□ -1.43
SCFD1-209ENST00000553280 BDH2Q9BUT1 245 aa6.09□□□□□ -1.43
SCFD1-209ENST00000553280 C1orf43Q9BWL3 253 aa6.09□□□□□ -1.43
SCFD1-209ENST00000553280 TTLL2Q9BWV7 592 aa6.09□□□□□ -1.43
SCFD1-209ENST00000553280 BRIP1Q9BX63 1249 aa6.09□□□□□ -1.43
SCFD1-209ENST00000553280 C11orf54Q9H0W9 315 aaPredicted RBP6.09□□□□□ -1.43
SCFD1-209ENST00000553280 ZDHHC8Q9ULC8 765 aa6.09□□□□□ -1.43
SCFD1-209ENST00000553280 DGKBQ9Y6T7 804 aa6.09□□□□□ -1.43
SCFD1-209ENST00000553280 PRSS29PA6NIE9 313 aa6.08□□□□□ -1.44
SCFD1-209ENST00000553280 NRP1O14786 923 aa6.08□□□□□ -1.44
SCFD1-209ENST00000553280 TLR5O60602 858 aa6.08□□□□□ -1.44
SCFD1-209ENST00000553280 MATN4O95460 622 aa6.08□□□□□ -1.44
SCFD1-209ENST00000553280 CD1AP06126 327 aa6.08□□□□□ -1.44
SCFD1-209ENST00000553280 MTHFD1P11586 935 aaKnown RBP6.08□□□□□ -1.44
SCFD1-209ENST00000553280 CCT5P48643 541 aa6.08□□□□□ -1.44
SCFD1-209ENST00000553280 HSPA7P48741 367 aa6.08□□□□□ -1.44
SCFD1-209ENST00000553280 ATP2C1P98194 919 aaPredicted RBP6.08□□□□□ -1.44
SCFD1-209ENST00000553280 ICA1Q05084 483 aa6.08□□□□□ -1.44
SCFD1-209ENST00000553280 BIRC3Q13489 604 aa6.08□□□□□ -1.44
SCFD1-209ENST00000553280 USP10Q14694 798 aaKnown RBP6.08□□□□□ -1.44
SCFD1-209ENST00000553280 ELF2Q15723 593 aa6.08□□□□□ -1.44
SCFD1-209ENST00000553280 PABPC1LQ4VXU2 614 aaKnown RBP6.08□□□□□ -1.44
SCFD1-209ENST00000553280 C3orf38Q5JPI3 329 aa6.08□□□□□ -1.44
SCFD1-209ENST00000553280 KLHDC7AQ5VTJ3 777 aa6.08□□□□□ -1.44
SCFD1-209ENST00000553280 AGBL4Q5VU57 503 aa6.08□□□□□ -1.44
SCFD1-209ENST00000553280 MDM1Q8TC05 714 aa6.08□□□□□ -1.44
SCFD1-209ENST00000553280 TNPO1Q92973 898 aaKnown RBP6.08□□□□□ -1.44
SCFD1-209ENST00000553280 ISCA1Q9BUE6 129 aa6.08□□□□□ -1.44
SCFD1-209ENST00000553280 KIAA1683Q9H0B3 1180 aa6.08□□□□□ -1.44
SCFD1-209ENST00000553280 ENKD1Q9H0I2 346 aa6.08□□□□□ -1.44
SCFD1-209ENST00000553280 TMEM168Q9H0V1 697 aa6.08□□□□□ -1.44
SCFD1-209ENST00000553280 JADE2Q9NQC1 790 aa6.08□□□□□ -1.44
SCFD1-209ENST00000553280 SACM1LQ9NTJ5 587 aa6.08□□□□□ -1.44
SCFD1-209ENST00000553280 ANAPC4Q9UJX5 808 aa6.08□□□□□ -1.44
SCFD1-209ENST00000553280 PCDHGB3Q9Y5G1 929 aa6.08□□□□□ -1.44
SCFD1-209ENST00000553280 TRIM43BA6NCK2 446 aa6.07□□□□□ -1.44
SCFD1-209ENST00000553280 BTN3A1O00481 513 aa6.07□□□□□ -1.44
SCFD1-209ENST00000553280 TBC1D4O60343 1298 aa6.07□□□□□ -1.44
SCFD1-209ENST00000553280 PLA2G6O60733 806 aa6.07□□□□□ -1.44
SCFD1-209ENST00000553280 HARSP12081 509 aaKnown RBP6.07□□□□□ -1.44
SCFD1-209ENST00000553280 CSF2RBP32927 897 aa6.07□□□□□ -1.44
SCFD1-209ENST00000553280 CASRP41180 1078 aa6.07□□□□□ -1.44
SCFD1-209ENST00000553280 ALDH1A3P47895 512 aa6.07□□□□□ -1.44
SCFD1-209ENST00000553280 BPIFB4P59827 614 aa6.07□□□□□ -1.44
SCFD1-209ENST00000553280 CREMQ03060 361 aa6.07□□□□□ -1.44
SCFD1-209ENST00000553280 HGFACQ04756 655 aa6.07□□□□□ -1.44
SCFD1-209ENST00000553280 PLP2Q04941 152 aa6.07□□□□□ -1.44
SCFD1-209ENST00000553280 EXOSC9Q06265 439 aaKnown RBP6.07□□□□□ -1.44
SCFD1-209ENST00000553280 PUM3Q15397 648 aaKnown RBP6.07□□□□□ -1.44
SCFD1-209ENST00000553280 MPEG1Q2M385 716 aa6.07□□□□□ -1.44
SCFD1-209ENST00000553280 CCDC93Q567U6 631 aa6.07□□□□□ -1.44
SCFD1-209ENST00000553280 MFSD14BQ5SR56 506 aa6.07□□□□□ -1.44
SCFD1-209ENST00000553280 UBXN11Q5T124 520 aa6.07□□□□□ -1.44
SCFD1-209ENST00000553280 ERICH6BQ5W0A0 696 aa6.07□□□□□ -1.44
SCFD1-209ENST00000553280 LDHAL6AQ6ZMR3 332 aa6.07□□□□□ -1.44
SCFD1-209ENST00000553280 USP30Q70CQ3 517 aa6.07□□□□□ -1.44
SCFD1-209ENST00000553280 ANKRD53Q8N9V6 530 aa6.07□□□□□ -1.44
SCFD1-209ENST00000553280 GIMAP8Q8ND71 665 aaPredicted RBP6.07□□□□□ -1.44
SCFD1-209ENST00000553280 TRIM43Q96BQ3 446 aaPredicted RBP6.07□□□□□ -1.44
SCFD1-209ENST00000553280 SMURF2Q9HAU4 748 aa6.07□□□□□ -1.44
SCFD1-209ENST00000553280 SERHLQ9NQF3 203 aa6.07□□□□□ -1.44
SCFD1-209ENST00000553280 MYO1AQ9UBC5 1043 aa6.07□□□□□ -1.44
SCFD1-209ENST00000553280 ADAM29Q9UKF5 820 aa6.07□□□□□ -1.44
SCFD1-209ENST00000553280 GTF2A1LQ9UNN4 478 aa6.07□□□□□ -1.44
SCFD1-209ENST00000553280 RUVBL1Q9Y265 456 aaKnown RBP6.07□□□□□ -1.44
SCFD1-209ENST00000553280 CEP83Q9Y592 693 aa6.07□□□□□ -1.44
SCFD1-209ENST00000553280 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.07□□□□□ -1.44
SCFD1-209ENST00000553280 DUSP10Q9Y6W6 482 aa6.07□□□□□ -1.44
SCFD1-209ENST00000553280 GRM6O15303 877 aa6.06□□□□□ -1.44
SCFD1-209ENST00000553280 FFAR2O15552 330 aa6.06□□□□□ -1.44
SCFD1-209ENST00000553280 NOBOXO60393 691 aa6.06□□□□□ -1.44
SCFD1-209ENST00000553280 SBK3P0C264 359 aa6.06□□□□□ -1.44
SCFD1-209ENST00000553280 ZNF888P0CJ79 500 aaPredicted RBP6.06□□□□□ -1.44
SCFD1-209ENST00000553280 HSD3B1P14060 373 aa6.06□□□□□ -1.44
SCFD1-209ENST00000553280 EEF1GP26641 437 aaKnown RBP6.06□□□□□ -1.44
SCFD1-209ENST00000553280 CNR2P34972 360 aa6.06□□□□□ -1.44
SCFD1-209ENST00000553280 RPS16P62249 146 aaKnown RBP6.06□□□□□ -1.44
SCFD1-209ENST00000553280 ADAM8P78325 824 aa6.06□□□□□ -1.44
SCFD1-209ENST00000553280 APBA1Q02410 837 aa6.06□□□□□ -1.44
SCFD1-209ENST00000553280 KIF22Q14807 665 aa6.06□□□□□ -1.44
SCFD1-209ENST00000553280 STARD3Q14849 445 aa6.06□□□□□ -1.44
SCFD1-209ENST00000553280 SLC35G1Q2M3R5 365 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms