RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 LMBRD1Q9NUN5 540 aa11.09□□□□□ -0.63
TRAFD1-208ENST00000552890 INTS13Q9NVM9 706 aa11.09□□□□□ -0.63
TRAFD1-208ENST00000552890 THEGQ9P2T0 379 aa11.09□□□□□ -0.63
TRAFD1-208ENST00000552890 PCDHB8Q9UN66 801 aa11.09□□□□□ -0.63
TRAFD1-208ENST00000552890 ANO9A1A5B4 782 aa11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 C2orf71A6NGG8 1288 aa11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 EPOPA6NHQ4 379 aa11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 OR6C75A6NL08 312 aa11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 SPDYE4A6NLX3 237 aa11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 RFXAPO00287 272 aa11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 HUS1O60921 280 aa11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 N4BP1O75113 896 aaKnown RBP11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 PHACTR2O75167 634 aa11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 GLUD1P00367 558 aa11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 PRR29P0C7W0 189 aa11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 FGFR3P22607 806 aa11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 HOXD13P35453 343 aa11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 TNFSF9P41273 254 aa11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 PRCPP42785 496 aa11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 AFF1P51825 1210 aaKnown RBP11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 LILRA4P59901 499 aa11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 ITIH3Q06033 890 aa11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 MORC3Q14149 939 aa11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 COL19A1Q14993 1142 aa11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 PTPN14Q15678 1187 aa11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 UVSSAQ2YD98 709 aa11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 TCEAL5Q5H9L2 206 aa11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 KIAA0319Q5VV43 1072 aa11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 C9orf57Q5W0N0 161 aa11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 CEP135Q66GS9 1140 aa11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 TPGS2Q68CL5 300 aa11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 CES5AQ6NT32 575 aa11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 CRELD2Q6UXH1 353 aaPredicted RBP11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 CCDC149Q6ZUS6 474 aa11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 FAM114A1Q8IWE2 563 aa11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 FAM186BQ8IYM0 893 aa11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 RNF168Q8IYW5 571 aaPredicted RBP11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 CSGALNACT2Q8N6G5 542 aa11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 HPS3Q969F9 1004 aa11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 ZMAT2Q96NC0 199 aaKnown RBP11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 NECTIN4Q96NY8 510 aa11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 CGRRF1Q99675 332 aa11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 RHOBTB2Q9BYZ6 727 aa11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 HAPLN2Q9GZV7 340 aa11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 NAT10Q9H0A0 1025 aaKnown RBP11.08□□□□□ -0.64
TRAFD1-208ENST00000552890 KPNA7A9QM74 516 aa11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 M0QZQ0 153 aa11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 PIRO00625 290 aa11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 CLIC2O15247 247 aa11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 OAZ2O95190 189 aa11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 STAU1O95793 577 aaKnown RBP11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 CAVIN2O95810 425 aa11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 EFEMP2O95967 443 aa11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 DLATP10515 647 aaKnown RBP11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 ERCC5P28715 1186 aaPredicted RBP11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 ELF1P32519 619 aa11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 PBX3P40426 434 aa11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 NRIP1P48552 1158 aa11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 LHX1P48742 406 aa11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 AARSP49588 968 aaKnown RBP eCLIP11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 ERVFC1P60507 584 aa11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 CLDN10P78369 228 aa11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 YWHAHQ04917 246 aaPredicted RBP11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 PAK1Q13153 545 aa11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 ADAM15Q13444 863 aa11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 MAPRE1Q15691 268 aaKnown RBP11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 PSMD5Q16401 504 aa11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 TPD52L1Q16890 204 aaPredicted RBP11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 CTC1Q2NKJ3 1217 aa11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 SEZ6Q53EL9 994 aa11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 CCDC183Q5T5S1 534 aa11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 SASS6Q6UVJ0 657 aa11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 FRMD5Q7Z6J6 570 aa11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 FILIP1Q7Z7B0 1213 aa11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 CEP57Q86XR8 500 aa11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 PARD3BQ8TEW8 1205 aa11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 C2orf15Q8WU43 125 aaKnown RBP11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 RIN2Q8WYP3 895 aaPredicted RBP11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 FAM81BQ96LP2 452 aa11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 RIPOR3Q96MK2 946 aa11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 POP1Q99575 1024 aaKnown RBP11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 UBE2ZQ9H832 354 aaPredicted RBP11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 MARCH5Q9NX47 278 aa11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 GDAP2Q9NXN4 497 aa11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 CLDND1Q9NY35 253 aa11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 HSFX1Q9UBD0 423 aa11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 ARMCX3Q9UH62 379 aaPredicted RBP11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 MAN1B1Q9UKM7 699 aa11.07□□□□□ -0.64
TRAFD1-208ENST00000552890 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.06□□□□□ -0.64
TRAFD1-208ENST00000552890 GOLGA8IPA6NC78 632 aa11.06□□□□□ -0.64
TRAFD1-208ENST00000552890 GOLGA8JA6NMD2 632 aa11.06□□□□□ -0.64
TRAFD1-208ENST00000552890 TULP1O00294 542 aaPredicted RBP11.06□□□□□ -0.64
TRAFD1-208ENST00000552890 LILRB3O75022 631 aa11.06□□□□□ -0.64
TRAFD1-208ENST00000552890 TPM2P07951 284 aa11.06□□□□□ -0.64
TRAFD1-208ENST00000552890 NFICP08651 508 aa11.06□□□□□ -0.64
TRAFD1-208ENST00000552890 KRT19P08727 400 aa11.06□□□□□ -0.64
TRAFD1-208ENST00000552890 CCDC192P0DO97 292 aa11.06□□□□□ -0.64
TRAFD1-208ENST00000552890 PCSK1P29120 753 aa11.06□□□□□ -0.64
TRAFD1-208ENST00000552890 HOXA9P31269 272 aa11.06□□□□□ -0.64
TRAFD1-208ENST00000552890 VAMP7P51809 220 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms