RNA–Protein interactions for RNA: ENST00000552329.1

CHPT1-209, Transcript of choline phosphotransferase 1, humanhuman

TSL 4

Gene CHPT1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-209ENST00000552329 TEX33O43247 280 aa7.93□□□□□ -1.14
CHPT1-209ENST00000552329 CT47B1P0C2W7 299 aaPredicted RBP7.93□□□□□ -1.14
CHPT1-209ENST00000552329 PF4V1P10720 104 aa7.93□□□□□ -1.14
CHPT1-209ENST00000552329 MCM7P33993 719 aa7.93□□□□□ -1.14
CHPT1-209ENST00000552329 CTXN1P60606 82 aa7.93□□□□□ -1.14
CHPT1-209ENST00000552329 TIGD2Q4W5G0 525 aa7.93□□□□□ -1.14
CHPT1-209ENST00000552329 SEM1Q6ZVN7 128 aa7.93□□□□□ -1.14
CHPT1-209ENST00000552329 USP51Q70EK9 711 aa7.93□□□□□ -1.14
CHPT1-209ENST00000552329 PLXDC1Q8IUK5 500 aa7.93□□□□□ -1.14
CHPT1-209ENST00000552329 SYNE4Q8N205 404 aa7.93□□□□□ -1.14
CHPT1-209ENST00000552329 TBC1D15Q8TC07 691 aa7.93□□□□□ -1.14
CHPT1-209ENST00000552329 HAS1Q92839 578 aa7.93□□□□□ -1.14
CHPT1-209ENST00000552329 ANKFY1Q9P2R3 1169 aa7.93□□□□□ -1.14
CHPT1-209ENST00000552329 USP25Q9UHP3 1055 aa7.93□□□□□ -1.14
CHPT1-209ENST00000552329 VPS8Q8N3P4 1428 aa7.93□□□□□ -1.14
CHPT1-209ENST00000552329 RNASET2O00584 256 aaKnown RBP7.92□□□□□ -1.14
CHPT1-209ENST00000552329 CD1AP06126 327 aa7.92□□□□□ -1.14
CHPT1-209ENST00000552329 ADH4P08319 380 aa7.92□□□□□ -1.14
CHPT1-209ENST00000552329 MAKP20794 623 aa7.92□□□□□ -1.14
CHPT1-209ENST00000552329 PDCP20941 246 aa7.92□□□□□ -1.14
CHPT1-209ENST00000552329 SLC6A4P31645 630 aa7.92□□□□□ -1.14
CHPT1-209ENST00000552329 KHDC1Q4VXA5 237 aaKnown RBP7.92□□□□□ -1.14
CHPT1-209ENST00000552329 MRGPREQ86SM8 312 aa7.92□□□□□ -1.14
CHPT1-209ENST00000552329 RAVER1Q8IY67 606 aaKnown RBP7.92□□□□□ -1.14
CHPT1-209ENST00000552329 PROKR1Q8TCW9 393 aa7.92□□□□□ -1.14
CHPT1-209ENST00000552329 LARP4BQ92615 738 aaKnown RBP7.92□□□□□ -1.14
CHPT1-209ENST00000552329 DMRTA2Q96SC8 542 aa7.92□□□□□ -1.14
CHPT1-209ENST00000552329 SLC46A2Q9BY10 475 aa7.92□□□□□ -1.14
CHPT1-209ENST00000552329 CFDP1Q9UEE9 299 aaPredicted RBP7.92□□□□□ -1.14
CHPT1-209ENST00000552329 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.92□□□□□ -1.14
CHPT1-209ENST00000552329 ATP11BQ9Y2G3 1177 aa7.92□□□□□ -1.14
CHPT1-209ENST00000552329 CCNB3Q8WWL7 1395 aa7.92□□□□□ -1.14
CHPT1-209ENST00000552329 SCAPERQ9BY12 1400 aa7.92□□□□□ -1.14
CHPT1-209ENST00000552329 SLPIP03973 132 aa7.91□□□□□ -1.14
CHPT1-209ENST00000552329 LAG3P18627 525 aa7.91□□□□□ -1.14
CHPT1-209ENST00000552329 PTGS2P35354 604 aa7.91□□□□□ -1.14
CHPT1-209ENST00000552329 ACVRL1P37023 503 aa7.91□□□□□ -1.14
CHPT1-209ENST00000552329 RAB27AP51159 221 aa7.91□□□□□ -1.14
CHPT1-209ENST00000552329 HNRNPMP52272 730 aaKnown RBP eCLIP7.91□□□□□ -1.14
CHPT1-209ENST00000552329 DSC2Q02487 901 aa7.91□□□□□ -1.14
CHPT1-209ENST00000552329 MCL1Q07820 350 aa7.91□□□□□ -1.14
CHPT1-209ENST00000552329 AGAP9Q5VTM2 703 aa7.91□□□□□ -1.14
CHPT1-209ENST00000552329 ZNF627Q7L945 461 aa7.91□□□□□ -1.14
CHPT1-209ENST00000552329 AFAP1Q8N556 730 aa7.91□□□□□ -1.14
CHPT1-209ENST00000552329 CPEB3Q8NE35 698 aaKnown RBP7.91□□□□□ -1.14
CHPT1-209ENST00000552329 MARS2Q96GW9 593 aaKnown RBP7.91□□□□□ -1.14
CHPT1-209ENST00000552329 LRGUKQ96M69 825 aa7.91□□□□□ -1.14
CHPT1-209ENST00000552329 TYW1Q9NV66 732 aaKnown RBP7.91□□□□□ -1.14
CHPT1-209ENST00000552329 KLHL11Q9NVR0 708 aa7.91□□□□□ -1.14
CHPT1-209ENST00000552329 PLCH2O75038 1416 aa7.91□□□□□ -1.14
CHPT1-209ENST00000552329 ADGRL1O94910 1474 aa7.91□□□□□ -1.14
CHPT1-209ENST00000552329 CDC42BPBQ9Y5S2 1711 aa7.9□□□□□ -1.14
CHPT1-209ENST00000552329 DENND4BO75064 1496 aaPredicted RBP7.9□□□□□ -1.14
CHPT1-209ENST00000552329 NEO1Q92859 1461 aa7.9□□□□□ -1.14
CHPT1-209ENST00000552329 SPATA31D3P0C874 917 aa7.9□□□□□ -1.14
CHPT1-209ENST00000552329 NOMO3P69849 1222 aa7.9□□□□□ -1.14
CHPT1-209ENST00000552329 HSD11B2P80365 405 aa7.9□□□□□ -1.14
CHPT1-209ENST00000552329 FHL2Q14192 279 aa7.9□□□□□ -1.14
CHPT1-209ENST00000552329 ATP2B3Q16720 1220 aa7.9□□□□□ -1.14
CHPT1-209ENST00000552329 NOMO2Q5JPE7 1267 aa7.9□□□□□ -1.14
CHPT1-209ENST00000552329 PPP4R3AQ6IN85 833 aa7.9□□□□□ -1.14
CHPT1-209ENST00000552329 KCNV1Q6PIU1 500 aa7.9□□□□□ -1.14
CHPT1-209ENST00000552329 SPATA31D4Q6ZUB0 917 aa7.9□□□□□ -1.14
CHPT1-209ENST00000552329 VRK3Q8IV63 474 aa7.9□□□□□ -1.14
CHPT1-209ENST00000552329 RHOT2Q8IXI1 618 aa7.9□□□□□ -1.14
CHPT1-209ENST00000552329 MRGPRX4Q96LA9 322 aa7.9□□□□□ -1.14
CHPT1-209ENST00000552329 KRTAP4-11Q9BYQ6 195 aa7.9□□□□□ -1.14
CHPT1-209ENST00000552329 GTPBP4Q9BZE4 634 aaKnown RBP7.9□□□□□ -1.14
CHPT1-209ENST00000552329 REXO4Q9GZR2 422 aaKnown RBP7.9□□□□□ -1.14
CHPT1-209ENST00000552329 SRRDQ9UH36 339 aa7.9□□□□□ -1.14
CHPT1-209ENST00000552329 SLC45A2Q9UMX9 530 aa7.9□□□□□ -1.14
CHPT1-209ENST00000552329 PCDHA3Q9Y5H8 950 aa7.9□□□□□ -1.14
CHPT1-209ENST00000552329 FPGT-TNNI3KV9GXZ4 949 aa7.9□□□□□ -1.14
CHPT1-209ENST00000552329 ZNF644Q9H582 1327 aaPredicted RBP7.89□□□□□ -1.15
CHPT1-209ENST00000552329 CENPVL1A0A0U1RR11 272 aa7.89□□□□□ -1.15
CHPT1-209ENST00000552329 A0A1B0GTW7 788 aa7.89□□□□□ -1.15
CHPT1-209ENST00000552329 SGTAO43765 313 aa7.89□□□□□ -1.15
CHPT1-209ENST00000552329 ABHD16AO95870 558 aa7.89□□□□□ -1.15
CHPT1-209ENST00000552329 ELANEP08246 267 aa7.89□□□□□ -1.15
CHPT1-209ENST00000552329 ALAS1P13196 640 aa7.89□□□□□ -1.15
CHPT1-209ENST00000552329 TLE1Q04724 770 aa7.89□□□□□ -1.15
CHPT1-209ENST00000552329 RESTQ13127 1097 aa7.89□□□□□ -1.15
CHPT1-209ENST00000552329 FLYWCH1Q4VC44 716 aa7.89□□□□□ -1.15
CHPT1-209ENST00000552329 TMEM240Q5SV17 173 aa7.89□□□□□ -1.15
CHPT1-209ENST00000552329 ODR4Q5SWX8 454 aa7.89□□□□□ -1.15
CHPT1-209ENST00000552329 MAPKAPK5Q8IW41 473 aa7.89□□□□□ -1.15
CHPT1-209ENST00000552329 FITM2Q8N6M3 262 aa7.89□□□□□ -1.15
CHPT1-209ENST00000552329 NSUN6Q8TEA1 469 aaKnown RBP7.89□□□□□ -1.15
CHPT1-209ENST00000552329 SLAMF7Q9NQ25 335 aa7.89□□□□□ -1.15
CHPT1-209ENST00000552329 ZNF180Q9UJW8 692 aa7.89□□□□□ -1.15
CHPT1-209ENST00000552329 CFAP20Q9Y6A4 193 aaKnown RBP7.89□□□□□ -1.15
CHPT1-209ENST00000552329 CDC42BPAQ5VT25 1732 aa7.89□□□□□ -1.15
CHPT1-209ENST00000552329 TIAM1Q13009 1591 aa7.88□□□□□ -1.15
CHPT1-209ENST00000552329 CFAP74Q9C0B2 1584 aa7.88□□□□□ -1.15
CHPT1-209ENST00000552329 ARAP3Q8WWN8 1544 aa7.88□□□□□ -1.15
CHPT1-209ENST00000552329 AKAP10O43572 662 aa7.88□□□□□ -1.15
CHPT1-209ENST00000552329 AGFG2O95081 481 aa7.88□□□□□ -1.15
CHPT1-209ENST00000552329 PEX11BO96011 259 aa7.88□□□□□ -1.15
CHPT1-209ENST00000552329 FGFR4P22455 802 aa7.88□□□□□ -1.15
CHPT1-209ENST00000552329 PHKA1P46020 1223 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms