RNA–Protein interactions for RNA: ENST00000551160.5

BEST3-210, Transcript of bestrophin 3, humanhuman

TSL 3 BASIC

Gene BEST3, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-210ENST00000551160 SH3PXD2AQ5TCZ1 1133 aa11.27□□□□□ -0.61
BEST3-210ENST00000551160 EEF1DP3Q658K8 133 aa11.27□□□□□ -0.61
BEST3-210ENST00000551160 CDCA2Q69YH5 1023 aaPredicted RBP11.27□□□□□ -0.61
BEST3-210ENST00000551160 C1orf228Q6PIY5 440 aa11.27□□□□□ -0.61
BEST3-210ENST00000551160 MAEAQ7L5Y9 396 aa11.27□□□□□ -0.61
BEST3-210ENST00000551160 POTEDQ86YR6 584 aa11.27□□□□□ -0.61
BEST3-210ENST00000551160 COL26A1Q96A83 441 aa11.27□□□□□ -0.61
BEST3-210ENST00000551160 LRRC3BQ96PB8 259 aa11.27□□□□□ -0.61
BEST3-210ENST00000551160 PPP1R10Q96QC0 940 aaKnown RBP11.27□□□□□ -0.61
BEST3-210ENST00000551160 FZD8Q9H461 694 aa11.27□□□□□ -0.61
BEST3-210ENST00000551160 ASAH2Q9NR71 780 aa11.27□□□□□ -0.61
BEST3-210ENST00000551160 VPS45Q9NRW7 570 aa11.27□□□□□ -0.61
BEST3-210ENST00000551160 PRMT7Q9NVM4 692 aaPredicted RBP11.27□□□□□ -0.61
BEST3-210ENST00000551160 POLR3BQ9NW08 1133 aaPredicted RBP11.27□□□□□ -0.61
BEST3-210ENST00000551160 GTSE1Q9NYZ3 720 aa11.27□□□□□ -0.61
BEST3-210ENST00000551160 PCDHGA5Q9Y5G8 931 aa11.27□□□□□ -0.61
BEST3-210ENST00000551160 CHADO15335 359 aa11.26□□□□□ -0.61
BEST3-210ENST00000551160 HMGB1P09429 215 aaKnown RBP11.26□□□□□ -0.61
BEST3-210ENST00000551160 LIG1P18858 919 aa11.26□□□□□ -0.61
BEST3-210ENST00000551160 RARRES1P49788 294 aa11.26□□□□□ -0.61
BEST3-210ENST00000551160 EPHA5P54756 1037 aa11.26□□□□□ -0.61
BEST3-210ENST00000551160 SOX4Q06945 474 aaPredicted RBP11.26□□□□□ -0.61
BEST3-210ENST00000551160 FCHO2Q0JRZ9 810 aa11.26□□□□□ -0.61
BEST3-210ENST00000551160 FAM187BQ17R55 369 aa11.26□□□□□ -0.61
BEST3-210ENST00000551160 PLK5Q496M5 336 aa11.26□□□□□ -0.61
BEST3-210ENST00000551160 STXBP5Q5T5C0 1151 aa11.26□□□□□ -0.61
BEST3-210ENST00000551160 IQCEQ6IPM2 695 aa11.26□□□□□ -0.61
BEST3-210ENST00000551160 KIAA1211LQ6NV74 962 aa11.26□□□□□ -0.61
BEST3-210ENST00000551160 KRT25Q7Z3Z0 450 aa11.26□□□□□ -0.61
BEST3-210ENST00000551160 RALGPS2Q86X27 583 aaPredicted RBP11.26□□□□□ -0.61
BEST3-210ENST00000551160 ELMOD1Q8N336 334 aa11.26□□□□□ -0.61
BEST3-210ENST00000551160 FAM200AQ8TCP9 573 aa11.26□□□□□ -0.61
BEST3-210ENST00000551160 PRIMPOLQ96LW4 560 aa11.26□□□□□ -0.61
BEST3-210ENST00000551160 JAKMIP1Q96N16 626 aaKnown RBP11.26□□□□□ -0.61
BEST3-210ENST00000551160 EIF2AK1Q9BQI3 630 aaKnown RBP11.26□□□□□ -0.61
BEST3-210ENST00000551160 SCNM1Q9BWG6 230 aa11.26□□□□□ -0.61
BEST3-210ENST00000551160 FBXL5Q9UKA1 691 aa11.26□□□□□ -0.61
BEST3-210ENST00000551160 KCNJ14Q9UNX9 436 aa11.26□□□□□ -0.61
BEST3-210ENST00000551160 TICRRQ7Z2Z1 1910 aa11.25□□□□□ -0.61
BEST3-210ENST00000551160 TRAPPC3O43617 180 aa11.25□□□□□ -0.61
BEST3-210ENST00000551160 MARCH6O60337 910 aa11.25□□□□□ -0.61
BEST3-210ENST00000551160 CCNT1O60563 726 aaKnown RBP11.25□□□□□ -0.61
BEST3-210ENST00000551160 LYPLA2O95372 231 aa11.25□□□□□ -0.61
BEST3-210ENST00000551160 GCFC2P16383 781 aaKnown RBP11.25□□□□□ -0.61
BEST3-210ENST00000551160 PDIA3P30101 505 aaKnown RBP11.25□□□□□ -0.61
BEST3-210ENST00000551160 TNK2Q07912 1038 aa11.25□□□□□ -0.61
BEST3-210ENST00000551160 PRPF4BQ13523 1007 aaKnown RBP11.25□□□□□ -0.61
BEST3-210ENST00000551160 PPP4R3AQ6IN85 833 aa11.25□□□□□ -0.61
BEST3-210ENST00000551160 NEK8Q86SG6 692 aa11.25□□□□□ -0.61
BEST3-210ENST00000551160 ZBTB8OSQ8IWT0 167 aa11.25□□□□□ -0.61
BEST3-210ENST00000551160 PIGOQ8TEQ8 1089 aa11.25□□□□□ -0.61
BEST3-210ENST00000551160 BSNDQ8WZ55 320 aa11.25□□□□□ -0.61
BEST3-210ENST00000551160 ZNF512Q96ME7 567 aaPredicted RBP11.25□□□□□ -0.61
BEST3-210ENST00000551160 CCDC43Q96MW1 224 aaKnown RBP11.25□□□□□ -0.61
BEST3-210ENST00000551160 UROC1Q96N76 676 aa11.25□□□□□ -0.61
BEST3-210ENST00000551160 HSD17B14Q9BPX1 270 aa11.25□□□□□ -0.61
BEST3-210ENST00000551160 ANKEF1Q9NU02 776 aa11.25□□□□□ -0.61
BEST3-210ENST00000551160 FLNBO75369 2602 aaKnown RBP11.25□□□□□ -0.61
BEST3-210ENST00000551160 CCDC194A0A1B0GVG4 234 aa11.24□□□□□ -0.61
BEST3-210ENST00000551160 A0A1W2PRU2 124 aa11.24□□□□□ -0.61
BEST3-210ENST00000551160 LNP1A1A4G5 178 aa11.24□□□□□ -0.61
BEST3-210ENST00000551160 PODXLO00592 558 aa11.24□□□□□ -0.61
BEST3-210ENST00000551160 DCLK1O15075 740 aa11.24□□□□□ -0.61
BEST3-210ENST00000551160 CREB5Q02930 508 aa11.24□□□□□ -0.61
BEST3-210ENST00000551160 SSRP1Q08945 709 aaKnown RBP11.24□□□□□ -0.61
BEST3-210ENST00000551160 CTXN3Q4LDR2 81 aa11.24□□□□□ -0.61
BEST3-210ENST00000551160 TPGS2Q68CL5 300 aa11.24□□□□□ -0.61
BEST3-210ENST00000551160 TMC8Q8IU68 726 aa11.24□□□□□ -0.61
BEST3-210ENST00000551160 ARID3BQ8IVW6 561 aaPredicted RBP11.24□□□□□ -0.61
BEST3-210ENST00000551160 TRIM22Q8IYM9 498 aa11.24□□□□□ -0.61
BEST3-210ENST00000551160 SYNPOQ8N3V7 929 aa11.24□□□□□ -0.61
BEST3-210ENST00000551160 LEMD2Q8NC56 503 aa11.24□□□□□ -0.61
BEST3-210ENST00000551160 E2F7Q96AV8 911 aa11.24□□□□□ -0.61
BEST3-210ENST00000551160 ZC3H10Q96K80 434 aaKnown RBP11.24□□□□□ -0.61
BEST3-210ENST00000551160 HHIPQ96QV1 700 aa11.24□□□□□ -0.61
BEST3-210ENST00000551160 ADPGKQ9BRR6 497 aa11.24□□□□□ -0.61
BEST3-210ENST00000551160 KIFC3Q9BVG8 833 aa11.24□□□□□ -0.61
BEST3-210ENST00000551160 LRRC3Q9BY71 257 aa11.24□□□□□ -0.61
BEST3-210ENST00000551160 AGXT2Q9BYV1 514 aa11.24□□□□□ -0.61
BEST3-210ENST00000551160 CCDC113Q9H0I3 377 aa11.24□□□□□ -0.61
BEST3-210ENST00000551160 AFF4Q9UHB7 1163 aaKnown RBP11.24□□□□□ -0.61
BEST3-210ENST00000551160 YIPF1Q9Y548 306 aa11.24□□□□□ -0.61
BEST3-210ENST00000551160 SETXQ7Z333 2677 aaKnown RBP11.23□□□□□ -0.61
BEST3-210ENST00000551160 GREB1Q4ZG55 1949 aa11.23□□□□□ -0.61
BEST3-210ENST00000551160 CCDC163A0A0D9SF12 145 aa11.23□□□□□ -0.61
BEST3-210ENST00000551160 SMIM28A0A1B0GU29 152 aa11.23□□□□□ -0.61
BEST3-210ENST00000551160 FAM205CA6NFA0 338 aa11.23□□□□□ -0.61
BEST3-210ENST00000551160 H7C4K7 107 aa11.23□□□□□ -0.61
BEST3-210ENST00000551160 TAF4O00268 1085 aa11.23□□□□□ -0.61
BEST3-210ENST00000551160 SYN3O14994 580 aa11.23□□□□□ -0.61
BEST3-210ENST00000551160 AKAP3O75969 853 aa11.23□□□□□ -0.61
BEST3-210ENST00000551160 DEXIO95424 95 aa11.23□□□□□ -0.61
BEST3-210ENST00000551160 PRAMEF12O95522 483 aa11.23□□□□□ -0.61
BEST3-210ENST00000551160 CAVIN2O95810 425 aa11.23□□□□□ -0.61
BEST3-210ENST00000551160 MRPL58Q14197 206 aaKnown RBP11.23□□□□□ -0.61
BEST3-210ENST00000551160 MAPK6Q16659 721 aa11.23□□□□□ -0.61
BEST3-210ENST00000551160 DCAF4L1Q3SXM0 396 aa11.23□□□□□ -0.61
BEST3-210ENST00000551160 EARS2Q5JPH6 523 aaKnown RBP11.23□□□□□ -0.61
BEST3-210ENST00000551160 DAB2IPQ5VWQ8 1189 aa11.23□□□□□ -0.61
BEST3-210ENST00000551160 GALNT17Q6IS24 598 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms