RNA–Protein interactions for RNA: ENST00000550657.1

UBE2N-205, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2 BASIC

Gene UBE2N, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-205ENST00000550657 ZACNQ401N2 412 aa9.79□□□□□ -0.84
UBE2N-205ENST00000550657 FAM133BQ5BKY9 247 aaKnown RBP9.79□□□□□ -0.84
UBE2N-205ENST00000550657 XKR3Q5GH77 459 aa9.79□□□□□ -0.84
UBE2N-205ENST00000550657 ANGEL2Q5VTE6 544 aaKnown RBP9.79□□□□□ -0.84
UBE2N-205ENST00000550657 ICE2Q659A1 982 aa9.79□□□□□ -0.84
UBE2N-205ENST00000550657 ABHD15Q6UXT9 468 aa9.79□□□□□ -0.84
UBE2N-205ENST00000550657 ANKS1BQ7Z6G8 1248 aa9.79□□□□□ -0.84
UBE2N-205ENST00000550657 EXOC3L1Q86VI1 746 aa9.79□□□□□ -0.84
UBE2N-205ENST00000550657 ANKRD35Q8N283 1001 aa9.79□□□□□ -0.84
UBE2N-205ENST00000550657 CCDC197Q8NCU1 140 aa9.79□□□□□ -0.84
UBE2N-205ENST00000550657 ATXN2LQ8WWM7 1075 aaKnown RBP9.79□□□□□ -0.84
UBE2N-205ENST00000550657 SLC7A3Q8WY07 619 aa9.79□□□□□ -0.84
UBE2N-205ENST00000550657 ARHGEF2Q92974 986 aaKnown RBP9.79□□□□□ -0.84
UBE2N-205ENST00000550657 DDX27Q96GQ7 796 aaKnown RBP9.79□□□□□ -0.84
UBE2N-205ENST00000550657 SNF8Q96H20 258 aa9.79□□□□□ -0.84
UBE2N-205ENST00000550657 DCLK3Q9C098 648 aa9.79□□□□□ -0.84
UBE2N-205ENST00000550657 EFCC1Q9HA90 598 aa9.79□□□□□ -0.84
UBE2N-205ENST00000550657 C17orf75Q9HAS0 396 aa9.79□□□□□ -0.84
UBE2N-205ENST00000550657 NUB1Q9Y5A7 615 aa9.79□□□□□ -0.84
UBE2N-205ENST00000550657 DKC1O60832 514 aaKnown RBP eCLIP9.78□□□□□ -0.84
UBE2N-205ENST00000550657 C4BPAP04003 597 aaKnown RBP9.78□□□□□ -0.84
UBE2N-205ENST00000550657 EDN1P05305 212 aa9.78□□□□□ -0.84
UBE2N-205ENST00000550657 PAEPP09466 180 aa9.78□□□□□ -0.84
UBE2N-205ENST00000550657 SUPT20HL2P0C7V6 817 aa9.78□□□□□ -0.84
UBE2N-205ENST00000550657 ZSCAN5DPP0CG00 497 aa9.78□□□□□ -0.84
UBE2N-205ENST00000550657 TNFSF9P41273 254 aa9.78□□□□□ -0.84
UBE2N-205ENST00000550657 RPL7AP62424 266 aaKnown RBP9.78□□□□□ -0.84
UBE2N-205ENST00000550657 NOP14P78316 857 aaKnown RBP9.78□□□□□ -0.84
UBE2N-205ENST00000550657 DRP2Q13474 957 aa9.78□□□□□ -0.84
UBE2N-205ENST00000550657 PSMD6Q15008 389 aa9.78□□□□□ -0.84
UBE2N-205ENST00000550657 SUPT20HL1Q3ZLR7 823 aa9.78□□□□□ -0.84
UBE2N-205ENST00000550657 DALRD3Q5D0E6 543 aaKnown RBP9.78□□□□□ -0.84
UBE2N-205ENST00000550657 ENOSF1Q7L5Y1 443 aa9.78□□□□□ -0.84
UBE2N-205ENST00000550657 CDR2LQ86X02 465 aaPredicted RBP9.78□□□□□ -0.84
UBE2N-205ENST00000550657 RDM1Q8NG50 284 aa9.78□□□□□ -0.84
UBE2N-205ENST00000550657 TMEM174Q8WUU8 243 aa9.78□□□□□ -0.84
UBE2N-205ENST00000550657 PAIP2Q9BPZ3 127 aaKnown RBP9.78□□□□□ -0.84
UBE2N-205ENST00000550657 ACAD9Q9H845 621 aa9.78□□□□□ -0.84
UBE2N-205ENST00000550657 SAMD15Q9P1V8 674 aa9.78□□□□□ -0.84
UBE2N-205ENST00000550657 RBBP6Q7Z6E9 1792 aaKnown RBP9.78□□□□□ -0.84
UBE2N-205ENST00000550657 KIF13BQ9NQT8 1826 aa9.78□□□□□ -0.84
UBE2N-205ENST00000550657 RGPD3A6NKT7 1758 aaPredicted RBP9.78□□□□□ -0.84
UBE2N-205ENST00000550657 RGPD4Q7Z3J3 1758 aa9.78□□□□□ -0.84
UBE2N-205ENST00000550657 PROSCO94903 275 aa9.78□□□□□ -0.84
UBE2N-205ENST00000550657 POTEJP0CG39 1038 aa9.78□□□□□ -0.84
UBE2N-205ENST00000550657 SRGAP2CP0DJJ0 459 aa9.78□□□□□ -0.84
UBE2N-205ENST00000550657 PSMC4P43686 418 aa9.78□□□□□ -0.84
UBE2N-205ENST00000550657 MAMLD1Q13495 774 aa9.78□□□□□ -0.84
UBE2N-205ENST00000550657 ANKRD20A8PQ5CZ79 823 aa9.78□□□□□ -0.84
UBE2N-205ENST00000550657 SPDYCQ5MJ68 293 aa9.78□□□□□ -0.84
UBE2N-205ENST00000550657 CRELD2Q6UXH1 353 aaPredicted RBP9.78□□□□□ -0.84
UBE2N-205ENST00000550657 TAOK1Q7L7X3 1001 aa9.78□□□□□ -0.84
UBE2N-205ENST00000550657 YTHDF3Q7Z739 585 aaKnown RBP9.78□□□□□ -0.84
UBE2N-205ENST00000550657 CNPY4Q8N129 248 aa9.78□□□□□ -0.84
UBE2N-205ENST00000550657 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.78□□□□□ -0.84
UBE2N-205ENST00000550657 RUNDC3BQ96NL0 473 aa9.78□□□□□ -0.84
UBE2N-205ENST00000550657 PAGR1Q9BTK6 254 aa9.78□□□□□ -0.84
UBE2N-205ENST00000550657 TEX13BQ9BXU2 312 aa9.78□□□□□ -0.84
UBE2N-205ENST00000550657 OSBPL8Q9BZF1 889 aa9.78□□□□□ -0.84
UBE2N-205ENST00000550657 AS3MTQ9HBK9 375 aa9.78□□□□□ -0.84
UBE2N-205ENST00000550657 SLC40A1Q9NP59 571 aa9.78□□□□□ -0.84
UBE2N-205ENST00000550657 TMEM120BA0PK00 339 aa9.77□□□□□ -0.84
UBE2N-205ENST00000550657 TP73O15350 636 aa9.77□□□□□ -0.84
UBE2N-205ENST00000550657 OATP04181 439 aa9.77□□□□□ -0.84
UBE2N-205ENST00000550657 BPIFB4P59827 614 aa9.77□□□□□ -0.84
UBE2N-205ENST00000550657 MTM1Q13496 603 aa9.77□□□□□ -0.84
UBE2N-205ENST00000550657 NCOA4Q13772 614 aa9.77□□□□□ -0.84
UBE2N-205ENST00000550657 TMEM132AQ24JP5 1023 aa9.77□□□□□ -0.84
UBE2N-205ENST00000550657 IZUMO3Q5VZ72 239 aa9.77□□□□□ -0.84
UBE2N-205ENST00000550657 DCAF15Q66K64 600 aa9.77□□□□□ -0.84
UBE2N-205ENST00000550657 MON1BQ7L1V2 547 aa9.77□□□□□ -0.84
UBE2N-205ENST00000550657 CD248Q9HCU0 757 aa9.77□□□□□ -0.84
UBE2N-205ENST00000550657 PDLIM7Q9NR12 457 aa9.77□□□□□ -0.84
UBE2N-205ENST00000550657 TCP11X1B4DZS4 312 aa9.77□□□□□ -0.85
UBE2N-205ENST00000550657 MAFGO15525 162 aa9.77□□□□□ -0.85
UBE2N-205ENST00000550657 CST3P01034 146 aaPredicted RBP9.77□□□□□ -0.85
UBE2N-205ENST00000550657 ETS1P14921 441 aa9.77□□□□□ -0.85
UBE2N-205ENST00000550657 ITIH2P19823 946 aa9.77□□□□□ -0.85
UBE2N-205ENST00000550657 BRD2P25440 801 aaKnown RBP9.77□□□□□ -0.85
UBE2N-205ENST00000550657 SCTRP47872 440 aa9.77□□□□□ -0.85
UBE2N-205ENST00000550657 NOMO3P69849 1222 aa9.77□□□□□ -0.85
UBE2N-205ENST00000550657 PLCB3Q01970 1234 aa9.77□□□□□ -0.85
UBE2N-205ENST00000550657 CNGA2Q16280 664 aa9.77□□□□□ -0.85
UBE2N-205ENST00000550657 FAM182AQ5T1J6 154 aa9.77□□□□□ -0.85
UBE2N-205ENST00000550657 RHOT1Q8IXI2 618 aa9.77□□□□□ -0.85
UBE2N-205ENST00000550657 SRRM1Q8IYB3 904 aaKnown RBP9.77□□□□□ -0.85
UBE2N-205ENST00000550657 ABRAQ8N0Z2 381 aa9.77□□□□□ -0.85
UBE2N-205ENST00000550657 ANKS4BQ8N8V4 417 aa9.77□□□□□ -0.85
UBE2N-205ENST00000550657 C12orf50Q8NA57 414 aaPredicted RBP9.77□□□□□ -0.85
UBE2N-205ENST00000550657 REPS2Q8NFH8 660 aa9.77□□□□□ -0.85
UBE2N-205ENST00000550657 ATL2Q8NHH9 583 aa9.77□□□□□ -0.85
UBE2N-205ENST00000550657 ZNF317Q96PQ6 595 aaPredicted RBP9.77□□□□□ -0.85
UBE2N-205ENST00000550657 SENP7Q9BQF6 1050 aa9.77□□□□□ -0.85
UBE2N-205ENST00000550657 STMN4Q9H169 189 aaPredicted RBP9.77□□□□□ -0.85
UBE2N-205ENST00000550657 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.77□□□□□ -0.85
UBE2N-205ENST00000550657 SRRM3A6NNA2 597 aaPredicted RBP9.77□□□□□ -0.85
UBE2N-205ENST00000550657 SPATA31C2B4DYI2 1134 aa9.77□□□□□ -0.85
UBE2N-205ENST00000550657 NFKBIEO00221 500 aa9.77□□□□□ -0.85
UBE2N-205ENST00000550657 GH1P01241 217 aa9.77□□□□□ -0.85
UBE2N-205ENST00000550657 IFNB1P01574 187 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms