RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 CXCL16Q9H2A7 254 aa22.42■■□□□ 1.18
PRDM4-205ENST00000550376 POLIQ9UNA4 740 aa22.42■■□□□ 1.18
PRDM4-205ENST00000550376 PHKA2P46019 1235 aa22.41■■□□□ 1.18
PRDM4-205ENST00000550376 RNPC3Q96LT9 517 aaKnown RBP22.41■■□□□ 1.18
PRDM4-205ENST00000550376 CDHR5Q9HBB8 845 aa22.41■■□□□ 1.18
PRDM4-205ENST00000550376 AMACRQ9UHK6 382 aa22.41■■□□□ 1.18
PRDM4-205ENST00000550376 NFU1Q9UMS0 254 aa22.41■■□□□ 1.18
PRDM4-205ENST00000550376 LACTBL1A8MY62 500 aa22.41■■□□□ 1.18
PRDM4-205ENST00000550376 CYP1A2P05177 515 aa22.41■■□□□ 1.18
PRDM4-205ENST00000550376 STAG3L1P0CL83 205 aa22.41■■□□□ 1.18
PRDM4-205ENST00000550376 SND1Q7KZF4 910 aaKnown RBP eCLIP22.41■■□□□ 1.18
PRDM4-205ENST00000550376 DDX42Q86XP3 938 aaKnown RBP eCLIP22.41■■□□□ 1.18
PRDM4-205ENST00000550376 KIAA0319LQ8IZA0 1049 aa22.41■■□□□ 1.18
PRDM4-205ENST00000550376 LINC01465Q8N7H1 131 aa22.41■■□□□ 1.18
PRDM4-205ENST00000550376 EMID1Q96A84 441 aaPredicted RBP22.41■■□□□ 1.18
PRDM4-205ENST00000550376 C11orf70Q9BRQ4 267 aa22.41■■□□□ 1.18
PRDM4-205ENST00000550376 CELF4Q9BZC1 486 aaKnown RBP22.41■■□□□ 1.18
PRDM4-205ENST00000550376 IMPG2Q9BZV3 1241 aa22.41■■□□□ 1.18
PRDM4-205ENST00000550376 ASAP2O43150 1006 aa22.4■■□□□ 1.18
PRDM4-205ENST00000550376 SART1O43290 800 aaKnown RBP22.4■■□□□ 1.18
PRDM4-205ENST00000550376 TUBBP07437 444 aa22.4■■□□□ 1.18
PRDM4-205ENST00000550376 FAM153BP0C7A2 387 aa22.4■■□□□ 1.18
PRDM4-205ENST00000550376 FAM193AP78312 1265 aa22.4■■□□□ 1.18
PRDM4-205ENST00000550376 DGKDQ16760 1214 aa22.4■■□□□ 1.18
PRDM4-205ENST00000550376 FAM153CQ494X1 144 aa22.4■■□□□ 1.18
PRDM4-205ENST00000550376 OLFML2BQ68BL8 750 aa22.4■■□□□ 1.18
PRDM4-205ENST00000550376 RASAL3Q86YV0 1011 aa22.4■■□□□ 1.18
PRDM4-205ENST00000550376 PDZD7Q9H5P4 517 aa22.4■■□□□ 1.18
PRDM4-205ENST00000550376 RPF1Q9H9Y2 349 aaKnown RBP22.4■■□□□ 1.18
PRDM4-205ENST00000550376 FAM153AQ9UHL3 310 aa22.4■■□□□ 1.18
PRDM4-205ENST00000550376 TNFSF13BQ9Y275 285 aa22.4■■□□□ 1.18
PRDM4-205ENST00000550376 A0A0U1RQG5 324 aaPredicted RBP22.4■■□□□ 1.18
PRDM4-205ENST00000550376 CDH8P55286 799 aa22.4■■□□□ 1.18
PRDM4-205ENST00000550376 MCOLN2Q8IZK6 566 aa22.4■■□□□ 1.18
PRDM4-205ENST00000550376 RIN2Q8WYP3 895 aaPredicted RBP22.4■■□□□ 1.18
PRDM4-205ENST00000550376 ZSWIM1Q9BR11 485 aa22.4■■□□□ 1.18
PRDM4-205ENST00000550376 ERVK-5Q9HDB9 667 aa22.4■■□□□ 1.18
PRDM4-205ENST00000550376 GTF3C4Q9UKN8 822 aa22.4■■□□□ 1.18
PRDM4-205ENST00000550376 BRD2P25440 801 aaKnown RBP22.39■■□□□ 1.17
PRDM4-205ENST00000550376 TMOD1P28289 359 aa22.39■■□□□ 1.17
PRDM4-205ENST00000550376 BEX3Q00994 111 aa22.39■■□□□ 1.17
PRDM4-205ENST00000550376 HIC1Q14526 733 aa22.39■■□□□ 1.17
PRDM4-205ENST00000550376 CASKIN2Q8WXE0 1202 aa22.39■■□□□ 1.17
PRDM4-205ENST00000550376 CISHQ9NSE2 258 aa22.39■■□□□ 1.17
PRDM4-205ENST00000550376 SLC15A5A6NIM6 579 aa22.39■■□□□ 1.17
PRDM4-205ENST00000550376 MAGEB2O15479 319 aa22.39■■□□□ 1.17
PRDM4-205ENST00000550376 SPOPO43791 374 aa22.39■■□□□ 1.17
PRDM4-205ENST00000550376 JADE1Q6IE81 842 aa22.39■■□□□ 1.17
PRDM4-205ENST00000550376 RASGEF1CQ8N431 466 aa22.39■■□□□ 1.17
PRDM4-205ENST00000550376 AENQ8WTP8 325 aaKnown RBP22.39■■□□□ 1.17
PRDM4-205ENST00000550376 PRMT7Q9NVM4 692 aaPredicted RBP22.39■■□□□ 1.17
PRDM4-205ENST00000550376 ANAPC7Q9UJX3 599 aa22.39■■□□□ 1.17
PRDM4-205ENST00000550376 MCM3P25205 808 aa22.38■■□□□ 1.17
PRDM4-205ENST00000550376 NSFP46459 744 aaKnown RBP22.38■■□□□ 1.17
PRDM4-205ENST00000550376 ZNF200P98182 395 aaPredicted RBP22.38■■□□□ 1.17
PRDM4-205ENST00000550376 IQSEC1Q6DN90 963 aa22.38■■□□□ 1.17
PRDM4-205ENST00000550376 ZNF606Q8WXB4 792 aa22.38■■□□□ 1.17
PRDM4-205ENST00000550376 CCDC102AQ96A19 550 aa22.38■■□□□ 1.17
PRDM4-205ENST00000550376 ZIC5Q96T25 663 aa22.38■■□□□ 1.17
PRDM4-205ENST00000550376 UBXN6Q9BZV1 441 aa22.38■■□□□ 1.17
PRDM4-205ENST00000550376 XYLT2Q9H1B5 865 aa22.38■■□□□ 1.17
PRDM4-205ENST00000550376 TCRBV7S2A1N4TA0A589 114 aa22.38■■□□□ 1.17
PRDM4-205ENST00000550376 CES2O00748 559 aa22.38■■□□□ 1.17
PRDM4-205ENST00000550376 PYGMP11217 842 aa22.38■■□□□ 1.17
PRDM4-205ENST00000550376 TNNC1P63316 161 aa22.38■■□□□ 1.17
PRDM4-205ENST00000550376 ZNF699Q32M78 642 aa22.38■■□□□ 1.17
PRDM4-205ENST00000550376 MMS22LQ6ZRQ5 1243 aa22.38■■□□□ 1.17
PRDM4-205ENST00000550376 SIX4Q9UIU6 781 aa22.38■■□□□ 1.17
PRDM4-205ENST00000550376 MAP2K5Q13163 448 aa22.37■■□□□ 1.17
PRDM4-205ENST00000550376 WDR72Q3MJ13 1102 aa22.37■■□□□ 1.17
PRDM4-205ENST00000550376 MORN1Q5T089 497 aa22.37■■□□□ 1.17
PRDM4-205ENST00000550376 C1orf127Q8N9H9 656 aa22.37■■□□□ 1.17
PRDM4-205ENST00000550376 CYP1A1P04798 512 aaPredicted RBP22.37■■□□□ 1.17
PRDM4-205ENST00000550376 TBXAS1P24557 533 aaPredicted RBP22.37■■□□□ 1.17
PRDM4-205ENST00000550376 HADHBP55084 474 aaKnown RBP22.37■■□□□ 1.17
PRDM4-205ENST00000550376 SGSM1Q2NKQ1 1148 aa22.37■■□□□ 1.17
PRDM4-205ENST00000550376 MAP9Q49MG5 647 aa22.37■■□□□ 1.17
PRDM4-205ENST00000550376 C11orf63Q6NUN7 778 aa22.37■■□□□ 1.17
PRDM4-205ENST00000550376 ZDHHC14Q8IZN3 488 aa22.37■■□□□ 1.17
PRDM4-205ENST00000550376 MROH7Q68CQ1 1323 aa22.37■■□□□ 1.17
PRDM4-205ENST00000550376 TTI1O43156 1089 aa22.36■■□□□ 1.17
PRDM4-205ENST00000550376 TNNC2P02585 160 aa22.36■■□□□ 1.17
PRDM4-205ENST00000550376 ITGB3P05106 788 aa22.36■■□□□ 1.17
PRDM4-205ENST00000550376 PEX5P50542 639 aa22.36■■□□□ 1.17
PRDM4-205ENST00000550376 BPIFB4P59827 614 aa22.36■■□□□ 1.17
PRDM4-205ENST00000550376 SLC10A6Q3KNW5 377 aa22.36■■□□□ 1.17
PRDM4-205ENST00000550376 TFAP2BQ92481 460 aa22.36■■□□□ 1.17
PRDM4-205ENST00000550376 KAT2BQ92831 832 aa22.36■■□□□ 1.17
PRDM4-205ENST00000550376 ANKRD36BP1Q96IX9 119 aa22.36■■□□□ 1.17
PRDM4-205ENST00000550376 TRIM31Q9BZY9 425 aa22.36■■□□□ 1.17
PRDM4-205ENST00000550376 HPCAL4Q9UM19 191 aa22.36■■□□□ 1.17
PRDM4-205ENST00000550376 HES2Q9Y543 173 aa22.36■■□□□ 1.17
PRDM4-205ENST00000550376 MGAMO43451 1857 aa22.36■■□□□ 1.17
PRDM4-205ENST00000550376 O00370 1275 aa22.36■■□□□ 1.17
PRDM4-205ENST00000550376 TSPAN1O60635 241 aa22.36■■□□□ 1.17
PRDM4-205ENST00000550376 NOMO3P69849 1222 aa22.36■■□□□ 1.17
PRDM4-205ENST00000550376 NIF3L1Q9GZT8 377 aa22.36■■□□□ 1.17
PRDM4-205ENST00000550376 ADAM22Q9P0K1 906 aa22.36■■□□□ 1.17
PRDM4-205ENST00000550376 B4GALT4O60513 344 aa22.35■■□□□ 1.17
PRDM4-205ENST00000550376 ASPAP45381 313 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms