RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 WNT16Q9UBV4 365 aa14.63□□□□□ -0.07
NUP188-211ENST00000550219 USP25Q9UHP3 1055 aa14.63□□□□□ -0.07
NUP188-211ENST00000550219 NPHP3-ACAD11A0A0J9YXS1 232 aa14.62□□□□□ -0.07
NUP188-211ENST00000550219 ANHXE9PGG2 379 aa14.62□□□□□ -0.07
NUP188-211ENST00000550219 POLR2DO15514 142 aaKnown RBP14.62□□□□□ -0.07
NUP188-211ENST00000550219 ZNF202O95125 648 aa14.62□□□□□ -0.07
NUP188-211ENST00000550219 PROZP22891 400 aa14.62□□□□□ -0.07
NUP188-211ENST00000550219 GUCY2CP25092 1073 aa14.62□□□□□ -0.07
NUP188-211ENST00000550219 ROR1Q01973 937 aa14.62□□□□□ -0.07
NUP188-211ENST00000550219 DHX8Q14562 1220 aaKnown RBP14.62□□□□□ -0.07
NUP188-211ENST00000550219 ANGPT1Q15389 498 aa14.62□□□□□ -0.07
NUP188-211ENST00000550219 NFKBIBQ15653 356 aa14.62□□□□□ -0.07
NUP188-211ENST00000550219 PABPC1LQ4VXU2 614 aaKnown RBP14.62□□□□□ -0.07
NUP188-211ENST00000550219 VARS2Q5ST30 1063 aaKnown RBP14.62□□□□□ -0.07
NUP188-211ENST00000550219 IQUBQ8NA54 791 aa14.62□□□□□ -0.07
NUP188-211ENST00000550219 GPT2Q8TD30 523 aa14.62□□□□□ -0.07
NUP188-211ENST00000550219 FGF13Q92913 245 aa14.62□□□□□ -0.07
NUP188-211ENST00000550219 KXD1Q9BQD3 176 aa14.62□□□□□ -0.07
NUP188-211ENST00000550219 RPP25Q9BUL9 199 aaKnown RBP14.62□□□□□ -0.07
NUP188-211ENST00000550219 TIPINQ9BVW5 301 aa14.62□□□□□ -0.07
NUP188-211ENST00000550219 PANK2Q9BZ23 570 aa14.62□□□□□ -0.07
NUP188-211ENST00000550219 C17orf75Q9HAS0 396 aa14.62□□□□□ -0.07
NUP188-211ENST00000550219 CNTN3Q9P232 1028 aa14.62□□□□□ -0.07
NUP188-211ENST00000550219 STK17AQ9UEE5 414 aa14.62□□□□□ -0.07
NUP188-211ENST00000550219 DOCK8Q8NF50 2099 aa14.62□□□□□ -0.07
NUP188-211ENST00000550219 PRR23AA6NEV1 266 aa14.61□□□□□ -0.07
NUP188-211ENST00000550219 ABLIM1O14639 778 aa14.61□□□□□ -0.07
NUP188-211ENST00000550219 PRRG1O14668 218 aa14.61□□□□□ -0.07
NUP188-211ENST00000550219 ACTN4O43707 911 aaKnown RBP14.61□□□□□ -0.07
NUP188-211ENST00000550219 LRG1P02750 347 aa14.61□□□□□ -0.07
NUP188-211ENST00000550219 DCNP07585 359 aaKnown RBP14.61□□□□□ -0.07
NUP188-211ENST00000550219 PLA2G4BP0C869 781 aa14.61□□□□□ -0.07
NUP188-211ENST00000550219 PLS3P13797 630 aa14.61□□□□□ -0.07
NUP188-211ENST00000550219 NBL1P41271 181 aa14.61□□□□□ -0.07
NUP188-211ENST00000550219 SMTNP53814 917 aa14.61□□□□□ -0.07
NUP188-211ENST00000550219 XKR4Q5GH76 650 aa14.61□□□□□ -0.07
NUP188-211ENST00000550219 MTSS1LQ765P7 747 aa14.61□□□□□ -0.07
NUP188-211ENST00000550219 TMEM130Q8N3G9 435 aa14.61□□□□□ -0.07
NUP188-211ENST00000550219 PDILTQ8N807 584 aa14.61□□□□□ -0.07
NUP188-211ENST00000550219 SYT2Q8N9I0 419 aaPredicted RBP14.61□□□□□ -0.07
NUP188-211ENST00000550219 RASSF8Q8NHQ8 419 aa14.61□□□□□ -0.07
NUP188-211ENST00000550219 RAD54LQ92698 747 aa14.61□□□□□ -0.07
NUP188-211ENST00000550219 TIGD1Q96MW7 591 aa14.61□□□□□ -0.07
NUP188-211ENST00000550219 CUEDC2Q9H467 287 aa14.61□□□□□ -0.07
NUP188-211ENST00000550219 DNMT3BQ9UBC3 853 aaKnown RBP14.61□□□□□ -0.07
NUP188-211ENST00000550219 TUBGCP4Q9UGJ1 667 aa14.61□□□□□ -0.07
NUP188-211ENST00000550219 BACE2Q9Y5Z0 518 aa14.61□□□□□ -0.07
NUP188-211ENST00000550219 ZFP37Q9Y6Q3 630 aaPredicted RBP14.61□□□□□ -0.07
NUP188-211ENST00000550219 COL4A3Q01955 1670 aa14.61□□□□□ -0.07
NUP188-211ENST00000550219 WDR27A2RRH5 827 aa14.6□□□□□ -0.07
NUP188-211ENST00000550219 MEFVO15553 781 aaPredicted RBP14.6□□□□□ -0.07
NUP188-211ENST00000550219 TOM1L1O75674 476 aa14.6□□□□□ -0.07
NUP188-211ENST00000550219 MBD3O95983 291 aa14.6□□□□□ -0.07
NUP188-211ENST00000550219 SLFN14P0C7P3 912 aa14.6□□□□□ -0.07
NUP188-211ENST00000550219 CXCL8P10145 99 aa14.6□□□□□ -0.07
NUP188-211ENST00000550219 MAPTP10636 758 aaKnown RBP14.6□□□□□ -0.07
NUP188-211ENST00000550219 KCNE1P15382 129 aa14.6□□□□□ -0.07
NUP188-211ENST00000550219 ELF1P32519 619 aa14.6□□□□□ -0.07
NUP188-211ENST00000550219 STAT6P42226 847 aa14.6□□□□□ -0.07
NUP188-211ENST00000550219 SLC12A3P55017 1021 aa14.6□□□□□ -0.07
NUP188-211ENST00000550219 SPAG1Q07617 926 aa14.6□□□□□ -0.07
NUP188-211ENST00000550219 ALKAL1Q6UXT8 129 aa14.6□□□□□ -0.07
NUP188-211ENST00000550219 NPAS3Q8IXF0 933 aa14.6□□□□□ -0.07
NUP188-211ENST00000550219 ELOA2Q8IYF1 753 aaPredicted RBP14.6□□□□□ -0.07
NUP188-211ENST00000550219 TMEM161BQ8NDZ6 487 aa14.6□□□□□ -0.07
NUP188-211ENST00000550219 SPIRE2Q8WWL2 714 aa14.6□□□□□ -0.07
NUP188-211ENST00000550219 NKD2Q969F2 451 aaPredicted RBP14.6□□□□□ -0.07
NUP188-211ENST00000550219 DHX58Q96C10 678 aa14.6□□□□□ -0.07
NUP188-211ENST00000550219 FOXQ1Q9C009 403 aa14.6□□□□□ -0.07
NUP188-211ENST00000550219 MAGEF1Q9HAY2 307 aa14.6□□□□□ -0.07
NUP188-211ENST00000550219 CYP4F11Q9HBI6 524 aa14.6□□□□□ -0.07
NUP188-211ENST00000550219 KBTBD4Q9NVX7 518 aa14.6□□□□□ -0.07
NUP188-211ENST00000550219 SERTAD1Q9UHV2 236 aa14.6□□□□□ -0.07
NUP188-211ENST00000550219 MRPS23Q9Y3D9 190 aaKnown RBP14.6□□□□□ -0.07
NUP188-211ENST00000550219 TRIP11Q15643 1979 aa14.6□□□□□ -0.07
NUP188-211ENST00000550219 PROB1E7EW31 1015 aa14.59□□□□□ -0.07
NUP188-211ENST00000550219 K7ENM7 598 aa14.59□□□□□ -0.07
NUP188-211ENST00000550219 SYN3O14994 580 aa14.59□□□□□ -0.07
NUP188-211ENST00000550219 CLDN3O15551 220 aa14.59□□□□□ -0.07
NUP188-211ENST00000550219 RHOP08100 348 aa14.59□□□□□ -0.07
NUP188-211ENST00000550219 POU2F2P09086 479 aa14.59□□□□□ -0.07
NUP188-211ENST00000550219 GPC5P78333 572 aa14.59□□□□□ -0.07
NUP188-211ENST00000550219 UVSSAQ2YD98 709 aa14.59□□□□□ -0.07
NUP188-211ENST00000550219 CTXN3Q4LDR2 81 aa14.59□□□□□ -0.07
NUP188-211ENST00000550219 ZNF280DQ6N043 979 aa14.59□□□□□ -0.07
NUP188-211ENST00000550219 KRBA2Q6ZNG9 492 aa14.59□□□□□ -0.07
NUP188-211ENST00000550219 GPBP1Q86WP2 473 aa14.59□□□□□ -0.07
NUP188-211ENST00000550219 LARP4BQ92615 738 aaKnown RBP14.59□□□□□ -0.07
NUP188-211ENST00000550219 MCRS1Q96EZ8 462 aa14.59□□□□□ -0.07
NUP188-211ENST00000550219 ZHX3Q9H4I2 956 aa14.59□□□□□ -0.07
NUP188-211ENST00000550219 SLC2A4RGQ9NR83 387 aa14.59□□□□□ -0.07
NUP188-211ENST00000550219 LARSQ9P2J5 1176 aaKnown RBP14.59□□□□□ -0.07
NUP188-211ENST00000550219 H7C4K7 107 aa14.58□□□□□ -0.08
NUP188-211ENST00000550219 FAM13AO94988 1023 aa14.58□□□□□ -0.08
NUP188-211ENST00000550219 KRT18P05783 430 aaKnown RBP14.58□□□□□ -0.08
NUP188-211ENST00000550219 CPB1P15086 417 aa14.58□□□□□ -0.08
NUP188-211ENST00000550219 CEBPBP17676 345 aa14.58□□□□□ -0.08
NUP188-211ENST00000550219 RPL9P32969 192 aaKnown RBP14.58□□□□□ -0.08
NUP188-211ENST00000550219 LIG4P49917 911 aa14.58□□□□□ -0.08
NUP188-211ENST00000550219 PPP2R3AQ06190 1150 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms