RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 PCSK1P29120 753 aa5.72□□□□□ -1.49
CCDC38-208ENST00000549876 FOLR3P41439 243 aa5.72□□□□□ -1.49
CCDC38-208ENST00000549876 ZNF81P51508 661 aa5.72□□□□□ -1.49
CCDC38-208ENST00000549876 ZNF529Q6P280 563 aa5.72□□□□□ -1.49
CCDC38-208ENST00000549876 FOXR2Q6PJQ5 311 aa5.72□□□□□ -1.49
CCDC38-208ENST00000549876 COLGALT2Q8IYK4 626 aa5.72□□□□□ -1.49
CCDC38-208ENST00000549876 Q8NA96 180 aa5.72□□□□□ -1.49
CCDC38-208ENST00000549876 C9orf106Q8NAJ2 232 aa5.72□□□□□ -1.49
CCDC38-208ENST00000549876 SSH3Q8TE77 659 aa5.72□□□□□ -1.49
CCDC38-208ENST00000549876 CASKIN2Q8WXE0 1202 aa5.72□□□□□ -1.49
CCDC38-208ENST00000549876 MARS2Q96GW9 593 aaKnown RBP5.72□□□□□ -1.49
CCDC38-208ENST00000549876 ZNF277Q9NRM2 450 aaPredicted RBP5.72□□□□□ -1.49
CCDC38-208ENST00000549876 AJAP1Q9UKB5 411 aaPredicted RBP5.72□□□□□ -1.49
CCDC38-208ENST00000549876 MTO1Q9Y2Z2 717 aaKnown RBP5.72□□□□□ -1.49
CCDC38-208ENST00000549876 GPR45Q9Y5Y3 372 aa5.72□□□□□ -1.49
CCDC38-208ENST00000549876 ACTL7AQ9Y615 435 aa5.72□□□□□ -1.49
CCDC38-208ENST00000549876 ENDOD1O94919 500 aa5.71□□□□□ -1.5
CCDC38-208ENST00000549876 AMY1AP04745 511 aa5.71□□□□□ -1.5
CCDC38-208ENST00000549876 WT1P19544 449 aaPredicted RBP5.71□□□□□ -1.5
CCDC38-208ENST00000549876 AGXTP21549 392 aa5.71□□□□□ -1.5
CCDC38-208ENST00000549876 GEN1Q17RS7 908 aa5.71□□□□□ -1.5
CCDC38-208ENST00000549876 Q8N9P0 234 aaPredicted RBP5.71□□□□□ -1.5
CCDC38-208ENST00000549876 ATL2Q8NHH9 583 aa5.71□□□□□ -1.5
CCDC38-208ENST00000549876 ZBTB21Q9ULJ3 1066 aa5.71□□□□□ -1.5
CCDC38-208ENST00000549876 ENTPD2Q9Y5L3 495 aa5.71□□□□□ -1.5
CCDC38-208ENST00000549876 PEX1O43933 1283 aa5.7□□□□□ -1.5
CCDC38-208ENST00000549876 NOMO3P69849 1222 aa5.7□□□□□ -1.5
CCDC38-208ENST00000549876 ATP8B2P98198 1209 aa5.7□□□□□ -1.5
CCDC38-208ENST00000549876 KLF1Q13351 362 aaPredicted RBP5.7□□□□□ -1.5
CCDC38-208ENST00000549876 INAVAQ3KP66 663 aa5.7□□□□□ -1.5
CCDC38-208ENST00000549876 NOMO2Q5JPE7 1267 aa5.7□□□□□ -1.5
CCDC38-208ENST00000549876 AKNAD1Q5T1N1 836 aa5.7□□□□□ -1.5
CCDC38-208ENST00000549876 DDX42Q86XP3 938 aaKnown RBP eCLIP5.7□□□□□ -1.5
CCDC38-208ENST00000549876 ZGPATQ8N5A5 531 aaKnown RBP5.7□□□□□ -1.5
CCDC38-208ENST00000549876 CCHCR1Q8TD31 782 aa5.7□□□□□ -1.5
CCDC38-208ENST00000549876 NUP133Q8WUM0 1156 aa5.7□□□□□ -1.5
CCDC38-208ENST00000549876 MED15Q96RN5 788 aa5.7□□□□□ -1.5
CCDC38-208ENST00000549876 TMEM140Q9NV12 185 aa5.7□□□□□ -1.5
CCDC38-208ENST00000549876 DNM3Q9UQ16 869 aa5.7□□□□□ -1.5
CCDC38-208ENST00000549876 TRIM75PA6NK02 468 aa5.69□□□□□ -1.5
CCDC38-208ENST00000549876 SLFN5Q08AF3 891 aa5.69□□□□□ -1.5
CCDC38-208ENST00000549876 MTM1Q13496 603 aa5.69□□□□□ -1.5
CCDC38-208ENST00000549876 SF3B3Q15393 1217 aaKnown RBP5.69□□□□□ -1.5
CCDC38-208ENST00000549876 PTF1AQ7RTS3 328 aa5.69□□□□□ -1.5
CCDC38-208ENST00000549876 UBE3BQ7Z3V4 1068 aa5.69□□□□□ -1.5
CCDC38-208ENST00000549876 GRASPQ7Z6J2 395 aaPredicted RBP5.69□□□□□ -1.5
CCDC38-208ENST00000549876 CBARPQ8N350 705 aaPredicted RBP5.69□□□□□ -1.5
CCDC38-208ENST00000549876 CNTD1Q8N815 330 aa5.69□□□□□ -1.5
CCDC38-208ENST00000549876 DPF1Q92782 380 aa5.69□□□□□ -1.5
CCDC38-208ENST00000549876 DPF2Q92785 391 aa5.69□□□□□ -1.5
CCDC38-208ENST00000549876 SARAFQ96BY9 339 aa5.69□□□□□ -1.5
CCDC38-208ENST00000549876 CYFIP2Q96F07 1278 aa5.69□□□□□ -1.5
CCDC38-208ENST00000549876 PNKPQ96T60 521 aa5.69□□□□□ -1.5
CCDC38-208ENST00000549876 ZNF70Q9UC06 446 aaPredicted RBP5.69□□□□□ -1.5
CCDC38-208ENST00000549876 WASHC2AQ641Q2 1341 aa5.69□□□□□ -1.5
CCDC38-208ENST00000549876 TRGV11A0A075B6L2 103 aa5.68□□□□□ -1.5
CCDC38-208ENST00000549876 TEX33O43247 280 aa5.68□□□□□ -1.5
CCDC38-208ENST00000549876 ZNF425Q6IV72 752 aa5.68□□□□□ -1.5
CCDC38-208ENST00000549876 VWA1Q6PCB0 445 aa5.68□□□□□ -1.5
CCDC38-208ENST00000549876 NRG4Q8WWG1 115 aa5.68□□□□□ -1.5
CCDC38-208ENST00000549876 TMX1Q9H3N1 280 aa5.68□□□□□ -1.5
CCDC38-208ENST00000549876 FAM171A2A8MVW0 826 aa5.67□□□□□ -1.5
CCDC38-208ENST00000549876 YY2O15391 372 aa5.67□□□□□ -1.5
CCDC38-208ENST00000549876 PROM1O43490 865 aa5.67□□□□□ -1.5
CCDC38-208ENST00000549876 GPR32O75388 356 aa5.67□□□□□ -1.5
CCDC38-208ENST00000549876 CELA2AP08217 269 aa5.67□□□□□ -1.5
CCDC38-208ENST00000549876 SRGNP10124 158 aa5.67□□□□□ -1.5
CCDC38-208ENST00000549876 MAPK10P53779 464 aa5.67□□□□□ -1.5
CCDC38-208ENST00000549876 MAPK7Q13164 816 aa5.67□□□□□ -1.5
CCDC38-208ENST00000549876 FITM2Q8N6M3 262 aa5.67□□□□□ -1.5
CCDC38-208ENST00000549876 PPM1NQ8N819 430 aa5.67□□□□□ -1.5
CCDC38-208ENST00000549876 PUS7LQ9H0K6 701 aaKnown RBP5.67□□□□□ -1.5
CCDC38-208ENST00000549876 GSTO2Q9H4Y5 243 aa5.67□□□□□ -1.5
CCDC38-208ENST00000549876 SLC5A4Q9NY91 659 aa5.67□□□□□ -1.5
CCDC38-208ENST00000549876 RUVBL1Q9Y265 456 aaKnown RBP5.67□□□□□ -1.5
CCDC38-208ENST00000549876 MYBBP1AQ9BQG0 1328 aaKnown RBP5.67□□□□□ -1.5
CCDC38-208ENST00000549876 WDR91A4D1P6 747 aa5.66□□□□□ -1.5
CCDC38-208ENST00000549876 CCDC151A5D8V7 595 aa5.66□□□□□ -1.5
CCDC38-208ENST00000549876 MPPED1O15442 326 aa5.66□□□□□ -1.5
CCDC38-208ENST00000549876 ELFN1P0C7U0 828 aa5.66□□□□□ -1.5
CCDC38-208ENST00000549876 ALAS1P13196 640 aa5.66□□□□□ -1.5
CCDC38-208ENST00000549876 DDCP20711 480 aa5.66□□□□□ -1.5
CCDC38-208ENST00000549876 CTGFP29279 349 aa5.66□□□□□ -1.5
CCDC38-208ENST00000549876 WASP42768 502 aa5.66□□□□□ -1.5
CCDC38-208ENST00000549876 PEG10Q86TG7 708 aaKnown RBP5.66□□□□□ -1.5
CCDC38-208ENST00000549876 ZNF366Q8N895 744 aa5.66□□□□□ -1.5
CCDC38-208ENST00000549876 HASPINQ8TF76 798 aa5.66□□□□□ -1.5
CCDC38-208ENST00000549876 JADE3Q92613 823 aa5.66□□□□□ -1.5
CCDC38-208ENST00000549876 CPNE5Q9HCH3 593 aa5.66□□□□□ -1.5
CCDC38-208ENST00000549876 MCM8Q9UJA3 840 aa5.66□□□□□ -1.5
CCDC38-208ENST00000549876 TUBD1Q9UJT1 453 aa5.66□□□□□ -1.5
CCDC38-208ENST00000549876 INTUQ9ULD6 942 aa5.66□□□□□ -1.5
CCDC38-208ENST00000549876 A0A1W2PS29 197 aa5.65□□□□□ -1.5
CCDC38-208ENST00000549876 TCRBV7S2A1N4TA0A589 114 aa5.65□□□□□ -1.5
CCDC38-208ENST00000549876 CDHR4A6H8M9 788 aa5.65□□□□□ -1.5
CCDC38-208ENST00000549876 GPD1P21695 349 aa5.65□□□□□ -1.5
CCDC38-208ENST00000549876 GRIA3P42263 894 aa5.65□□□□□ -1.5
CCDC38-208ENST00000549876 DACT2Q5SW24 774 aa5.65□□□□□ -1.5
CCDC38-208ENST00000549876 KIAA1614Q5VZ46 1190 aa5.65□□□□□ -1.5
CCDC38-208ENST00000549876 DCBLD1Q8N8Z6 715 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms