RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 CCL16O15467 120 aa20.27■□□□□ 0.84
CHMP1A-207ENST00000549328 ATF2P15336 505 aa20.27■□□□□ 0.84
CHMP1A-207ENST00000549328 PAX3P23760 479 aa20.27■□□□□ 0.84
CHMP1A-207ENST00000549328 AARSP49588 968 aaKnown RBP eCLIP20.27■□□□□ 0.847e-7■■■■■ 54
CHMP1A-207ENST00000549328 SPAG1Q07617 926 aa20.27■□□□□ 0.84
CHMP1A-207ENST00000549328 POSTNQ15063 836 aa20.27■□□□□ 0.84
CHMP1A-207ENST00000549328 SPATA1Q5VX52 437 aa20.27■□□□□ 0.84
CHMP1A-207ENST00000549328 TPGS2Q68CL5 300 aa20.27■□□□□ 0.84
CHMP1A-207ENST00000549328 ADALQ6DHV7 355 aa20.27■□□□□ 0.84
CHMP1A-207ENST00000549328 PANK2Q9BZ23 570 aa20.27■□□□□ 0.84
CHMP1A-207ENST00000549328 ASB7Q9H672 318 aa20.27■□□□□ 0.84
CHMP1A-207ENST00000549328 MRPL44Q9H9J2 332 aaKnown RBP20.27■□□□□ 0.84
CHMP1A-207ENST00000549328 OLFML3Q9NRN5 406 aa20.27■□□□□ 0.84
CHMP1A-207ENST00000549328 FBXL5Q9UKA1 691 aa20.27■□□□□ 0.84
CHMP1A-207ENST00000549328 MAFFQ9ULX9 164 aa20.27■□□□□ 0.84
CHMP1A-207ENST00000549328 DERAQ9Y315 318 aa20.27■□□□□ 0.84
CHMP1A-207ENST00000549328 A0A087X0B3 334 aa20.26■□□□□ 0.83
CHMP1A-207ENST00000549328 ARHGEF37A1IGU5 675 aa20.26■□□□□ 0.83
CHMP1A-207ENST00000549328 WDR27A2RRH5 827 aa20.26■□□□□ 0.83
CHMP1A-207ENST00000549328 YEATS4O95619 227 aa20.26■□□□□ 0.83
CHMP1A-207ENST00000549328 PDGFBP01127 241 aaPredicted RBP20.26■□□□□ 0.83
CHMP1A-207ENST00000549328 HSP90AA1P07900 732 aaKnown RBP20.26■□□□□ 0.83
CHMP1A-207ENST00000549328 ELF1P32519 619 aa20.26■□□□□ 0.83
CHMP1A-207ENST00000549328 NUBP1P53384 320 aa20.26■□□□□ 0.83
CHMP1A-207ENST00000549328 CTXN3Q4LDR2 81 aa20.26■□□□□ 0.83
CHMP1A-207ENST00000549328 ZNF280DQ6N043 979 aa20.26■□□□□ 0.83
CHMP1A-207ENST00000549328 GET4Q7L5D6 327 aaPredicted RBP20.26■□□□□ 0.83
CHMP1A-207ENST00000549328 TCEAL8Q8IYN2 117 aa20.26■□□□□ 0.83
CHMP1A-207ENST00000549328 OXCT2Q9BYC2 517 aaPredicted RBP20.26■□□□□ 0.83
CHMP1A-207ENST00000549328 TFIP11Q9UBB9 837 aaKnown RBP20.26■□□□□ 0.83
CHMP1A-207ENST00000549328 AGO2Q9UKV8 859 aaKnown RBP20.26■□□□□ 0.83
CHMP1A-207ENST00000549328 POLIQ9UNA4 740 aa20.26■□□□□ 0.83
CHMP1A-207ENST00000549328 EXOC7Q9UPT5 735 aa20.26■□□□□ 0.83
CHMP1A-207ENST00000549328 PCDHB13Q9Y5F0 798 aa20.26■□□□□ 0.83
CHMP1A-207ENST00000549328 DOCK6Q96HP0 2047 aa20.26■□□□□ 0.83
CHMP1A-207ENST00000549328 FRMD3A2A2Y4 597 aa20.25■□□□□ 0.83
CHMP1A-207ENST00000549328 ANHXE9PGG2 379 aa20.25■□□□□ 0.83
CHMP1A-207ENST00000549328 OAZ2O95190 189 aa20.25■□□□□ 0.83
CHMP1A-207ENST00000549328 ALCAMQ13740 583 aa20.25■□□□□ 0.83
CHMP1A-207ENST00000549328 IER5LQ5T953 404 aa20.25■□□□□ 0.83
CHMP1A-207ENST00000549328 JADE1Q6IE81 842 aa20.25■□□□□ 0.83
CHMP1A-207ENST00000549328 SLC44A3Q8N4M1 653 aa20.25■□□□□ 0.83
CHMP1A-207ENST00000549328 BEST2Q8NFU1 509 aa20.25■□□□□ 0.83
CHMP1A-207ENST00000549328 FAM212AQ96EL1 285 aa20.25■□□□□ 0.83
CHMP1A-207ENST00000549328 ACCSQ96QU6 501 aa20.25■□□□□ 0.83
CHMP1A-207ENST00000549328 CDH7Q9ULB5 785 aa20.25■□□□□ 0.83
CHMP1A-207ENST00000549328 KCNH3Q9ULD8 1083 aa20.25■□□□□ 0.83
CHMP1A-207ENST00000549328 WDFY4Q6ZS81 3184 aa20.25■□□□□ 0.83
CHMP1A-207ENST00000549328 TISP43B9A030 160 aa20.24■□□□□ 0.83
CHMP1A-207ENST00000549328 PRRG1O14668 218 aa20.24■□□□□ 0.83
CHMP1A-207ENST00000549328 ZSCAN22P10073 491 aaPredicted RBP20.24■□□□□ 0.83
CHMP1A-207ENST00000549328 IDEP14735 1019 aa20.24■□□□□ 0.83
CHMP1A-207ENST00000549328 HOXD11P31277 338 aaPredicted RBP20.24■□□□□ 0.83
CHMP1A-207ENST00000549328 ACOT2P49753 483 aa20.24■□□□□ 0.83
CHMP1A-207ENST00000549328 VCPP55072 806 aaKnown RBP20.24■□□□□ 0.83
CHMP1A-207ENST00000549328 NTHL1P78549 312 aa20.24■□□□□ 0.83
CHMP1A-207ENST00000549328 NHLH1Q02575 133 aa20.24■□□□□ 0.83
CHMP1A-207ENST00000549328 YWHAHQ04917 246 aaPredicted RBP20.24■□□□□ 0.83
CHMP1A-207ENST00000549328 L1TD1Q5T7N2 865 aaKnown RBP20.24■□□□□ 0.83
CHMP1A-207ENST00000549328 PDILTQ8N807 584 aa20.24■□□□□ 0.83
CHMP1A-207ENST00000549328 RSAD2Q8WXG1 361 aa20.24■□□□□ 0.83
CHMP1A-207ENST00000549328 LRRC27Q9C0I9 530 aa20.24■□□□□ 0.83
CHMP1A-207ENST00000549328 CUEDC2Q9H467 287 aa20.24■□□□□ 0.83
CHMP1A-207ENST00000549328 DNMT3BQ9UBC3 853 aaKnown RBP20.24■□□□□ 0.83
CHMP1A-207ENST00000549328 C2CD2Q9Y426 696 aa20.24■□□□□ 0.83
CHMP1A-207ENST00000549328 CUTAO60888 179 aa20.23■□□□□ 0.83
CHMP1A-207ENST00000549328 LRG1P02750 347 aa20.23■□□□□ 0.83
CHMP1A-207ENST00000549328 ADSSP30520 456 aa20.23■□□□□ 0.83
CHMP1A-207ENST00000549328 CLCN5P51795 746 aa20.23■□□□□ 0.83
CHMP1A-207ENST00000549328 PTPN5P54829 565 aa20.23■□□□□ 0.83
CHMP1A-207ENST00000549328 ARPP19P56211 112 aa20.23■□□□□ 0.83
CHMP1A-207ENST00000549328 LILRA4P59901 499 aa20.23■□□□□ 0.83
CHMP1A-207ENST00000549328 HTR4Q13639 388 aa20.23■□□□□ 0.83
CHMP1A-207ENST00000549328 TMEM132DQ14C87 1099 aa20.23■□□□□ 0.83
CHMP1A-207ENST00000549328 PABPC1LQ4VXU2 614 aaKnown RBP20.23■□□□□ 0.83
CHMP1A-207ENST00000549328 ATL3Q6DD88 541 aa20.23■□□□□ 0.83
CHMP1A-207ENST00000549328 KMT2EQ8IZD2 1858 aa20.23■□□□□ 0.83
CHMP1A-207ENST00000549328 POMGNT1Q8WZA1 660 aa20.23■□□□□ 0.83
CHMP1A-207ENST00000549328 FGF13Q92913 245 aa20.23■□□□□ 0.83
CHMP1A-207ENST00000549328 TNMDQ9H2S6 317 aa20.23■□□□□ 0.83
CHMP1A-207ENST00000549328 MFSD1Q9H3U5 465 aa20.23■□□□□ 0.83
CHMP1A-207ENST00000549328 AVENQ9NQS1 362 aaPredicted RBP20.23■□□□□ 0.83
CHMP1A-207ENST00000549328 PANK4Q9NVE7 773 aa20.23■□□□□ 0.83
CHMP1A-207ENST00000549328 WNT16Q9UBV4 365 aa20.23■□□□□ 0.83
CHMP1A-207ENST00000549328 AFF4Q9UHB7 1163 aaKnown RBP20.23■□□□□ 0.83
CHMP1A-207ENST00000549328 PIEZO1Q92508 2521 aa20.22■□□□□ 0.83
CHMP1A-207ENST00000549328 ANO9A1A5B4 782 aa20.22■□□□□ 0.83
CHMP1A-207ENST00000549328 PIRO00625 290 aa20.22■□□□□ 0.83
CHMP1A-207ENST00000549328 GCNT3O95395 438 aa20.22■□□□□ 0.83
CHMP1A-207ENST00000549328 F13A1P00488 732 aa20.22■□□□□ 0.83
CHMP1A-207ENST00000549328 SRFP11831 508 aa20.22■□□□□ 0.83
CHMP1A-207ENST00000549328 PTPN2P17706 415 aa20.22■□□□□ 0.83
CHMP1A-207ENST00000549328 TYMPP19971 482 aa20.22■□□□□ 0.83
CHMP1A-207ENST00000549328 GUCY2FP51841 1108 aa20.22■□□□□ 0.83
CHMP1A-207ENST00000549328 KCNA1Q09470 495 aa20.22■□□□□ 0.83
CHMP1A-207ENST00000549328 E2F4Q16254 413 aa20.22■□□□□ 0.83
CHMP1A-207ENST00000549328 C9orf57Q5W0N0 161 aa20.22■□□□□ 0.83
CHMP1A-207ENST00000549328 ASTLQ6HA08 431 aaPredicted RBP20.22■□□□□ 0.83
CHMP1A-207ENST00000549328 CRELD2Q6UXH1 353 aaPredicted RBP20.22■□□□□ 0.83
CHMP1A-207ENST00000549328 DSTYKQ6XUX3 929 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms