RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 FSCN2O14926 492 aa10.38□□□□□ -0.75
RAB5B-205ENST00000549034 KRT19P08727 400 aa10.38□□□□□ -0.75
RAB5B-205ENST00000549034 TMEM191BP0C7N4 346 aa10.38□□□□□ -0.75
RAB5B-205ENST00000549034 CTSAP10619 480 aa10.38□□□□□ -0.75
RAB5B-205ENST00000549034 NLRP12P59046 1061 aa10.38□□□□□ -0.75
RAB5B-205ENST00000549034 FKBP3Q00688 224 aaKnown RBP10.38□□□□□ -0.75
RAB5B-205ENST00000549034 ELAVL2Q12926 359 aaKnown RBP10.38□□□□□ -0.75
RAB5B-205ENST00000549034 PSMD6Q15008 389 aa10.38□□□□□ -0.75
RAB5B-205ENST00000549034 NFIL3Q16649 462 aa10.38□□□□□ -0.75
RAB5B-205ENST00000549034 EDRF1Q3B7T1 1238 aa10.38□□□□□ -0.75
RAB5B-205ENST00000549034 TIGD5Q53EQ6 642 aa10.38□□□□□ -0.75
RAB5B-205ENST00000549034 DSTYKQ6XUX3 929 aa10.38□□□□□ -0.75
RAB5B-205ENST00000549034 ADGRD2Q7Z7M1 963 aa10.38□□□□□ -0.75
RAB5B-205ENST00000549034 MLKLQ8NB16 471 aa10.38□□□□□ -0.75
RAB5B-205ENST00000549034 C3orf58Q8NDZ4 430 aa10.38□□□□□ -0.75
RAB5B-205ENST00000549034 MAFAQ8NHW3 353 aaPredicted RBP10.38□□□□□ -0.75
RAB5B-205ENST00000549034 TMEM174Q8WUU8 243 aa10.38□□□□□ -0.75
RAB5B-205ENST00000549034 RIN2Q8WYP3 895 aaPredicted RBP10.38□□□□□ -0.75
RAB5B-205ENST00000549034 PPP2R3CQ969Q6 453 aa10.38□□□□□ -0.75
RAB5B-205ENST00000549034 B3GALT6Q96L58 329 aa10.38□□□□□ -0.75
RAB5B-205ENST00000549034 HERC2P3Q9BVR0 1158 aa10.38□□□□□ -0.75
RAB5B-205ENST00000549034 ZBP1Q9H171 429 aa10.38□□□□□ -0.75
RAB5B-205ENST00000549034 INTS13Q9NVM9 706 aa10.38□□□□□ -0.75
RAB5B-205ENST00000549034 AGAP1Q9UPQ3 857 aa10.38□□□□□ -0.75
RAB5B-205ENST00000549034 CTNND2Q9UQB3 1225 aa10.38□□□□□ -0.75
RAB5B-205ENST00000549034 LAMA2P24043 3122 aaKnown RBP10.38□□□□□ -0.75
RAB5B-205ENST00000549034 COL4A4P53420 1690 aaPredicted RBP10.38□□□□□ -0.75
RAB5B-205ENST00000549034 SF3B1O75533 1304 aaKnown RBP eCLIP10.37□□□□□ -0.75
RAB5B-205ENST00000549034 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.37□□□□□ -0.75
RAB5B-205ENST00000549034 BICDL2A1A5D9 508 aa10.37□□□□□ -0.75
RAB5B-205ENST00000549034 C2orf71A6NGG8 1288 aa10.37□□□□□ -0.75
RAB5B-205ENST00000549034 TMEM189-UBE2V1I3L0A0 370 aa10.37□□□□□ -0.75
RAB5B-205ENST00000549034 PPEF2O14830 753 aa10.37□□□□□ -0.75
RAB5B-205ENST00000549034 PHACTR2O75167 634 aa10.37□□□□□ -0.75
RAB5B-205ENST00000549034 AKAP3O75969 853 aa10.37□□□□□ -0.75
RAB5B-205ENST00000549034 EFEMP2O95967 443 aa10.37□□□□□ -0.75
RAB5B-205ENST00000549034 CST3P01034 146 aaPredicted RBP10.37□□□□□ -0.75
RAB5B-205ENST00000549034 ITGB3P05106 788 aa10.37□□□□□ -0.75
RAB5B-205ENST00000549034 URODP06132 367 aa10.37□□□□□ -0.75
RAB5B-205ENST00000549034 KRT13P13646 458 aa10.37□□□□□ -0.75
RAB5B-205ENST00000549034 PTMSP20962 102 aa10.37□□□□□ -0.75
RAB5B-205ENST00000549034 KLRC2P26717 231 aa10.37□□□□□ -0.75
RAB5B-205ENST00000549034 GTF2F1P35269 517 aaKnown RBP eCLIP10.37□□□□□ -0.75
RAB5B-205ENST00000549034 SCN1AP35498 2009 aa10.37□□□□□ -0.75
RAB5B-205ENST00000549034 NRIP1P48552 1158 aa10.37□□□□□ -0.75
RAB5B-205ENST00000549034 GLUD2P49448 558 aa10.37□□□□□ -0.75
RAB5B-205ENST00000549034 VAMP7P51809 220 aa10.37□□□□□ -0.75
RAB5B-205ENST00000549034 DLG4P78352 724 aa10.37□□□□□ -0.75
RAB5B-205ENST00000549034 RBP5P82980 135 aa10.37□□□□□ -0.75
RAB5B-205ENST00000549034 LRRC63Q05C16 580 aa10.37□□□□□ -0.75
RAB5B-205ENST00000549034 PAK1Q13153 545 aa10.37□□□□□ -0.75
RAB5B-205ENST00000549034 ZCWPW2Q504Y3 356 aa10.37□□□□□ -0.75
RAB5B-205ENST00000549034 CCDC183Q5T5S1 534 aa10.37□□□□□ -0.75
RAB5B-205ENST00000549034 KIAA0319Q5VV43 1072 aa10.37□□□□□ -0.75
RAB5B-205ENST00000549034 SASS6Q6UVJ0 657 aa10.37□□□□□ -0.75
RAB5B-205ENST00000549034 TRAPPC11Q7Z392 1133 aa10.37□□□□□ -0.75
RAB5B-205ENST00000549034 CREBRFQ8IUR6 639 aa10.37□□□□□ -0.75
RAB5B-205ENST00000549034 WDR49Q8IV35 697 aa10.37□□□□□ -0.75
RAB5B-205ENST00000549034 FAM186BQ8IYM0 893 aa10.37□□□□□ -0.75
RAB5B-205ENST00000549034 OR5B17Q8NGF7 314 aa10.37□□□□□ -0.75
RAB5B-205ENST00000549034 PARD3BQ8TEW8 1205 aa10.37□□□□□ -0.75
RAB5B-205ENST00000549034 ZNF516Q92618 1163 aa10.37□□□□□ -0.75
RAB5B-205ENST00000549034 FAM84AQ96KN4 292 aa10.37□□□□□ -0.75
RAB5B-205ENST00000549034 KLHL5Q96PQ7 755 aa10.37□□□□□ -0.75
RAB5B-205ENST00000549034 CGRRF1Q99675 332 aa10.37□□□□□ -0.75
RAB5B-205ENST00000549034 TTPALQ9BTX7 342 aa10.37□□□□□ -0.75
RAB5B-205ENST00000549034 EMILIN2Q9BXX0 1053 aa10.37□□□□□ -0.75
RAB5B-205ENST00000549034 MTMR12Q9C0I1 747 aa10.37□□□□□ -0.75
RAB5B-205ENST00000549034 CHST7Q9NS84 486 aa10.37□□□□□ -0.75
RAB5B-205ENST00000549034 ANO9A1A5B4 782 aa10.36□□□□□ -0.75
RAB5B-205ENST00000549034 LRRIQ3A6PVS8 624 aaPredicted RBP10.36□□□□□ -0.75
RAB5B-205ENST00000549034 MAPK13O15264 365 aa10.36□□□□□ -0.75
RAB5B-205ENST00000549034 EPB41P11171 864 aaKnown RBP10.36□□□□□ -0.75
RAB5B-205ENST00000549034 FGFR3P22607 806 aa10.36□□□□□ -0.75
RAB5B-205ENST00000549034 TKTP29401 623 aaKnown RBP10.36□□□□□ -0.75
RAB5B-205ENST00000549034 POLR2BP30876 1174 aaKnown RBP10.36□□□□□ -0.75
RAB5B-205ENST00000549034 TAF6P49848 677 aa10.36□□□□□ -0.75
RAB5B-205ENST00000549034 LILRA4P59901 499 aa10.36□□□□□ -0.75
RAB5B-205ENST00000549034 DSG1Q02413 1049 aa10.36□□□□□ -0.75
RAB5B-205ENST00000549034 HYAL1Q12794 435 aa10.36□□□□□ -0.75
RAB5B-205ENST00000549034 BFSP1Q12934 665 aa10.36□□□□□ -0.75
RAB5B-205ENST00000549034 TRPC3Q13507 836 aa10.36□□□□□ -0.75
RAB5B-205ENST00000549034 PTPN14Q15678 1187 aa10.36□□□□□ -0.75
RAB5B-205ENST00000549034 RTP2Q5QGT7 225 aa10.36□□□□□ -0.75
RAB5B-205ENST00000549034 SCARA3Q6AZY7 606 aa10.36□□□□□ -0.75
RAB5B-205ENST00000549034 CAVIN1Q6NZI2 390 aaKnown RBP10.36□□□□□ -0.75
RAB5B-205ENST00000549034 PRSS55Q6UWB4 352 aaPredicted RBP10.36□□□□□ -0.75
RAB5B-205ENST00000549034 INTS8Q75QN2 995 aaKnown RBP10.36□□□□□ -0.75
RAB5B-205ENST00000549034 FILIP1Q7Z7B0 1213 aa10.36□□□□□ -0.75
RAB5B-205ENST00000549034 USP37Q86T82 979 aa10.36□□□□□ -0.75
RAB5B-205ENST00000549034 GLYCTKQ8IVS8 523 aa10.36□□□□□ -0.75
RAB5B-205ENST00000549034 RNF168Q8IYW5 571 aaPredicted RBP10.36□□□□□ -0.75
RAB5B-205ENST00000549034 C1orf127Q8N9H9 656 aa10.36□□□□□ -0.75
RAB5B-205ENST00000549034 PLEKHO2Q8TD55 490 aa10.36□□□□□ -0.75
RAB5B-205ENST00000549034 TMC2Q8TDI7 906 aa10.36□□□□□ -0.75
RAB5B-205ENST00000549034 SYAP1Q96A49 352 aaPredicted RBP10.36□□□□□ -0.75
RAB5B-205ENST00000549034 SUSD3Q96L08 255 aa10.36□□□□□ -0.75
RAB5B-205ENST00000549034 SENP8Q96LD8 212 aa10.36□□□□□ -0.75
RAB5B-205ENST00000549034 DUSP9Q99956 384 aaKnown RBP10.36□□□□□ -0.75
RAB5B-205ENST00000549034 SRRTQ9BXP5 876 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms