RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 DTHD1Q6ZMT9 781 aa14.05□□□□□ -0.16
PTCH1-218ENST00000548945 TPRG1Q6ZUI0 275 aa14.05□□□□□ -0.16
PTCH1-218ENST00000548945 ELMOD1Q8N336 334 aa14.05□□□□□ -0.16
PTCH1-218ENST00000548945 SUMF1Q8NBK3 374 aa14.05□□□□□ -0.16
PTCH1-218ENST00000548945 LEMD2Q8NC56 503 aa14.05□□□□□ -0.16
PTCH1-218ENST00000548945 MMTAG2Q9BU76 263 aaKnown RBP14.05□□□□□ -0.16
PTCH1-218ENST00000548945 CYP4F11Q9HBI6 524 aa14.05□□□□□ -0.16
PTCH1-218ENST00000548945 KCND2Q9NZV8 630 aa14.05□□□□□ -0.16
PTCH1-218ENST00000548945 AFF4Q9UHB7 1163 aaKnown RBP14.05□□□□□ -0.16
PTCH1-218ENST00000548945 MTF2Q9Y483 593 aaPredicted RBP14.05□□□□□ -0.16
PTCH1-218ENST00000548945 COL4A2P08572 1712 aa14.04□□□□□ -0.16
PTCH1-218ENST00000548945 PP2D1A8MPX8 630 aa14.04□□□□□ -0.16
PTCH1-218ENST00000548945 SLC16A4O15374 487 aa14.04□□□□□ -0.16
PTCH1-218ENST00000548945 FCARP24071 287 aa14.04□□□□□ -0.16
PTCH1-218ENST00000548945 IL17AQ16552 155 aa14.04□□□□□ -0.16
PTCH1-218ENST00000548945 CTXN3Q4LDR2 81 aa14.04□□□□□ -0.16
PTCH1-218ENST00000548945 CYP4A22Q5TCH4 519 aa14.04□□□□□ -0.16
PTCH1-218ENST00000548945 TANGO2Q6ICL3 276 aa14.04□□□□□ -0.16
PTCH1-218ENST00000548945 IQCEQ6IPM2 695 aa14.04□□□□□ -0.16
PTCH1-218ENST00000548945 KCNK18Q7Z418 384 aa14.04□□□□□ -0.16
PTCH1-218ENST00000548945 KIAA2013Q8IYS2 634 aa14.04□□□□□ -0.16
PTCH1-218ENST00000548945 TMEM161BQ8NDZ6 487 aa14.04□□□□□ -0.16
PTCH1-218ENST00000548945 NELL1Q92832 810 aa14.04□□□□□ -0.16
PTCH1-218ENST00000548945 KCNN1Q92952 543 aa14.04□□□□□ -0.16
PTCH1-218ENST00000548945 C18orf25Q96B23 403 aaPredicted RBP14.04□□□□□ -0.16
PTCH1-218ENST00000548945 RMDN1Q96DB5 314 aa14.04□□□□□ -0.16
PTCH1-218ENST00000548945 HINFPQ9BQA5 517 aa14.04□□□□□ -0.16
PTCH1-218ENST00000548945 CORO1BQ9BR76 489 aa14.04□□□□□ -0.16
PTCH1-218ENST00000548945 IER2Q9BTL4 223 aa14.04□□□□□ -0.16
PTCH1-218ENST00000548945 OXCT2Q9BYC2 517 aaPredicted RBP14.04□□□□□ -0.16
PTCH1-218ENST00000548945 FAM126AQ9BYI3 521 aaPredicted RBP14.04□□□□□ -0.16
PTCH1-218ENST00000548945 PLA2G2FQ9BZM2 168 aa14.04□□□□□ -0.16
PTCH1-218ENST00000548945 PLEKHA5Q9HAU0 1116 aa14.04□□□□□ -0.16
PTCH1-218ENST00000548945 ZFP14Q9HCL3 533 aa14.04□□□□□ -0.16
PTCH1-218ENST00000548945 TRPV5Q9NQA5 729 aa14.04□□□□□ -0.16
PTCH1-218ENST00000548945 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.04□□□□□ -0.16
PTCH1-218ENST00000548945 KIF3AQ9Y496 699 aa14.04□□□□□ -0.16
PTCH1-218ENST00000548945 EPG5Q9HCE0 2579 aa14.04□□□□□ -0.16
PTCH1-218ENST00000548945 TICRRQ7Z2Z1 1910 aa14.03□□□□□ -0.16
PTCH1-218ENST00000548945 H0YCG3 227 aa14.03□□□□□ -0.16
PTCH1-218ENST00000548945 MAN2B1O00754 1011 aa14.03□□□□□ -0.16
PTCH1-218ENST00000548945 MEFVO15553 781 aaPredicted RBP14.03□□□□□ -0.16
PTCH1-218ENST00000548945 SEC24AO95486 1093 aa14.03□□□□□ -0.16
PTCH1-218ENST00000548945 MAPTP10636 758 aaKnown RBP14.03□□□□□ -0.16
PTCH1-218ENST00000548945 PLS3P13797 630 aa14.03□□□□□ -0.16
PTCH1-218ENST00000548945 CD72P21854 359 aa14.03□□□□□ -0.16
PTCH1-218ENST00000548945 SCP2P22307 547 aa14.03□□□□□ -0.16
PTCH1-218ENST00000548945 TARSP26639 723 aaKnown RBP14.03□□□□□ -0.16
PTCH1-218ENST00000548945 MCM4P33991 863 aa14.03□□□□□ -0.16
PTCH1-218ENST00000548945 EPHA5P54756 1037 aa14.03□□□□□ -0.16
PTCH1-218ENST00000548945 MCL1Q07820 350 aa14.03□□□□□ -0.16
PTCH1-218ENST00000548945 ADCY1Q08828 1119 aa14.03□□□□□ -0.16
PTCH1-218ENST00000548945 PUM1Q14671 1186 aaKnown RBP eCLIP14.03□□□□□ -0.16
PTCH1-218ENST00000548945 SLC10A6Q3KNW5 377 aa14.03□□□□□ -0.16
PTCH1-218ENST00000548945 RILPL1Q5EBL4 403 aa14.03□□□□□ -0.16
PTCH1-218ENST00000548945 FAM78AQ5JUQ0 283 aa14.03□□□□□ -0.16
PTCH1-218ENST00000548945 POTEHQ6S545 545 aa14.03□□□□□ -0.16
PTCH1-218ENST00000548945 MAMSTRQ6ZN01 415 aa14.03□□□□□ -0.16
PTCH1-218ENST00000548945 PDZD4Q76G19 769 aaPredicted RBP14.03□□□□□ -0.16
PTCH1-218ENST00000548945 GPR161Q8N6U8 529 aaKnown RBP14.03□□□□□ -0.16
PTCH1-218ENST00000548945 SYT2Q8N9I0 419 aaPredicted RBP14.03□□□□□ -0.16
PTCH1-218ENST00000548945 ZBTB44Q8NCP5 570 aa14.03□□□□□ -0.16
PTCH1-218ENST00000548945 BEST2Q8NFU1 509 aa14.03□□□□□ -0.16
PTCH1-218ENST00000548945 ATRIPQ8WXE1 791 aa14.03□□□□□ -0.16
PTCH1-218ENST00000548945 DDX12PQ92771 950 aa14.03□□□□□ -0.16
PTCH1-218ENST00000548945 IRF7Q92985 503 aa14.03□□□□□ -0.16
PTCH1-218ENST00000548945 TCEAL4Q96EI5 215 aa14.03□□□□□ -0.16
PTCH1-218ENST00000548945 ZNF512Q96ME7 567 aaPredicted RBP14.03□□□□□ -0.16
PTCH1-218ENST00000548945 TBC1D32Q96NH3 1257 aa14.03□□□□□ -0.16
PTCH1-218ENST00000548945 ASB16Q96NS5 453 aa14.03□□□□□ -0.16
PTCH1-218ENST00000548945 TRMT61BQ9BVS5 477 aaKnown RBP14.03□□□□□ -0.16
PTCH1-218ENST00000548945 TRPV4Q9HBA0 871 aa14.03□□□□□ -0.16
PTCH1-218ENST00000548945 PRMT8Q9NR22 394 aaPredicted RBP14.03□□□□□ -0.16
PTCH1-218ENST00000548945 HEBP1Q9NRV9 189 aa14.03□□□□□ -0.16
PTCH1-218ENST00000548945 ZSCAN32Q9NX65 697 aa14.03□□□□□ -0.16
PTCH1-218ENST00000548945 PCDHB8Q9UN66 801 aa14.03□□□□□ -0.16
PTCH1-218ENST00000548945 M0QZQ0 153 aa14.02□□□□□ -0.17
PTCH1-218ENST00000548945 CLDN3O15551 220 aa14.02□□□□□ -0.17
PTCH1-218ENST00000548945 LILRB5O75023 590 aa14.02□□□□□ -0.17
PTCH1-218ENST00000548945 OAZ2O95190 189 aa14.02□□□□□ -0.17
PTCH1-218ENST00000548945 CLTAP09496 248 aa14.02□□□□□ -0.17
PTCH1-218ENST00000548945 HARSP12081 509 aaKnown RBP14.02□□□□□ -0.17
PTCH1-218ENST00000548945 CYP3A5P20815 502 aa14.02□□□□□ -0.17
PTCH1-218ENST00000548945 MARCKSP29966 332 aaPredicted RBP14.02□□□□□ -0.17
PTCH1-218ENST00000548945 CDC25AP30304 524 aa14.02□□□□□ -0.17
PTCH1-218ENST00000548945 LRPAP1P30533 357 aa14.02□□□□□ -0.17
PTCH1-218ENST00000548945 CCR2P41597 374 aa14.02□□□□□ -0.17
PTCH1-218ENST00000548945 ARPP19P56211 112 aa14.02□□□□□ -0.17
PTCH1-218ENST00000548945 ATP2C1P98194 919 aaPredicted RBP14.02□□□□□ -0.17
PTCH1-218ENST00000548945 CSTF1Q05048 431 aaKnown RBP14.02□□□□□ -0.17
PTCH1-218ENST00000548945 FZD5Q13467 585 aa14.02□□□□□ -0.17
PTCH1-218ENST00000548945 KYAT1Q16773 422 aa14.02□□□□□ -0.17
PTCH1-218ENST00000548945 DEPDC1BQ8WUY9 529 aa14.02□□□□□ -0.17
PTCH1-218ENST00000548945 SMARCD2Q92925 531 aa14.02□□□□□ -0.17
PTCH1-218ENST00000548945 ZBTB45Q96K62 511 aaPredicted RBP14.02□□□□□ -0.17
PTCH1-218ENST00000548945 TSPAN18Q96SJ8 248 aa14.02□□□□□ -0.17
PTCH1-218ENST00000548945 KIF2CQ99661 725 aa14.02□□□□□ -0.17
PTCH1-218ENST00000548945 GPR88Q9GZN0 384 aa14.02□□□□□ -0.17
PTCH1-218ENST00000548945 EPC1Q9H2F5 836 aa14.02□□□□□ -0.17
PTCH1-218ENST00000548945 BRD9Q9H8M2 597 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms