RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 BEST2Q8NFU1 509 aa12.38□□□□□ -0.43
BEST3-209ENST00000548658 SLC7A14Q8TBB6 771 aa12.38□□□□□ -0.43
BEST3-209ENST00000548658 SPOCK2Q92563 424 aa12.38□□□□□ -0.43
BEST3-209ENST00000548658 IRF2BPLQ9H1B7 796 aa12.38□□□□□ -0.43
BEST3-209ENST00000548658 CUEDC2Q9H467 287 aa12.38□□□□□ -0.43
BEST3-209ENST00000548658 OLFML3Q9NRN5 406 aa12.38□□□□□ -0.43
BEST3-209ENST00000548658 CPSF3Q9UKF6 684 aaKnown RBP12.38□□□□□ -0.43
BEST3-209ENST00000548658 AGO2Q9UKV8 859 aaKnown RBP12.38□□□□□ -0.43
BEST3-209ENST00000548658 PCDHB8Q9UN66 801 aa12.38□□□□□ -0.43
BEST3-209ENST00000548658 POLIQ9UNA4 740 aa12.38□□□□□ -0.43
BEST3-209ENST00000548658 DERAQ9Y315 318 aa12.38□□□□□ -0.43
BEST3-209ENST00000548658 STYXL1Q9Y6J8 313 aa12.38□□□□□ -0.43
BEST3-209ENST00000548658 DENND4AQ7Z401 1863 aa12.38□□□□□ -0.43
BEST3-209ENST00000548658 C2orf16Q68DN1 1984 aa12.38□□□□□ -0.43
BEST3-209ENST00000548658 MYMKA6NI61 221 aa12.37□□□□□ -0.43
BEST3-209ENST00000548658 M0QZQ0 153 aa12.37□□□□□ -0.43
BEST3-209ENST00000548658 PRRG1O14668 218 aa12.37□□□□□ -0.43
BEST3-209ENST00000548658 MEFVO15553 781 aaPredicted RBP12.37□□□□□ -0.43
BEST3-209ENST00000548658 FAM189A1O60320 539 aa12.37□□□□□ -0.43
BEST3-209ENST00000548658 TBC1D4O60343 1298 aa12.37□□□□□ -0.43
BEST3-209ENST00000548658 N4BP1O75113 896 aaKnown RBP12.37□□□□□ -0.43
BEST3-209ENST00000548658 IGFBP6P24592 240 aaPredicted RBP12.37□□□□□ -0.43
BEST3-209ENST00000548658 AVPR2P30518 371 aa12.37□□□□□ -0.43
BEST3-209ENST00000548658 TNFSF9P41273 254 aa12.37□□□□□ -0.43
BEST3-209ENST00000548658 ROR1Q01973 937 aa12.37□□□□□ -0.43
BEST3-209ENST00000548658 YWHAHQ04917 246 aaPredicted RBP12.37□□□□□ -0.43
BEST3-209ENST00000548658 CTXN3Q4LDR2 81 aa12.37□□□□□ -0.43
BEST3-209ENST00000548658 ZC2HC1CQ53FD0 456 aaPredicted RBP12.37□□□□□ -0.43
BEST3-209ENST00000548658 SPATA1Q5VX52 437 aa12.37□□□□□ -0.43
BEST3-209ENST00000548658 STXBP4Q6ZWJ1 553 aa12.37□□□□□ -0.43
BEST3-209ENST00000548658 GRASPQ7Z6J2 395 aaPredicted RBP12.37□□□□□ -0.43
BEST3-209ENST00000548658 USP37Q86T82 979 aa12.37□□□□□ -0.43
BEST3-209ENST00000548658 SFR1Q86XK3 245 aa12.37□□□□□ -0.43
BEST3-209ENST00000548658 NT5DC4Q86YG4 428 aa12.37□□□□□ -0.43
BEST3-209ENST00000548658 TCEAL8Q8IYN2 117 aa12.37□□□□□ -0.43
BEST3-209ENST00000548658 FEZF2Q8TBJ5 459 aa12.37□□□□□ -0.43
BEST3-209ENST00000548658 DNAJC19Q96DA6 116 aa12.37□□□□□ -0.43
BEST3-209ENST00000548658 FAM212AQ96EL1 285 aa12.37□□□□□ -0.43
BEST3-209ENST00000548658 ACCSQ96QU6 501 aa12.37□□□□□ -0.43
BEST3-209ENST00000548658 PANK2Q9BZ23 570 aa12.37□□□□□ -0.43
BEST3-209ENST00000548658 MFSD1Q9H3U5 465 aa12.37□□□□□ -0.43
BEST3-209ENST00000548658 TUBGCP4Q9UGJ1 667 aa12.37□□□□□ -0.43
BEST3-209ENST00000548658 CFAP45Q9UL16 551 aa12.37□□□□□ -0.43
BEST3-209ENST00000548658 KCNH3Q9ULD8 1083 aa12.37□□□□□ -0.43
BEST3-209ENST00000548658 DUSP12Q9UNI6 340 aa12.37□□□□□ -0.43
BEST3-209ENST00000548658 C2CD2Q9Y426 696 aa12.37□□□□□ -0.43
BEST3-209ENST00000548658 VWA8A3KMH1 1905 aa12.37□□□□□ -0.43
BEST3-209ENST00000548658 CCL16O15467 120 aa12.36□□□□□ -0.43
BEST3-209ENST00000548658 CUTAO60888 179 aa12.36□□□□□ -0.43
BEST3-209ENST00000548658 PPP1R37O75864 691 aa12.36□□□□□ -0.43
BEST3-209ENST00000548658 OAZ2O95190 189 aa12.36□□□□□ -0.43
BEST3-209ENST00000548658 LDHAP00338 332 aaKnown RBP12.36□□□□□ -0.43
BEST3-209ENST00000548658 LRG1P02750 347 aa12.36□□□□□ -0.43
BEST3-209ENST00000548658 ZSCAN22P10073 491 aaPredicted RBP12.36□□□□□ -0.43
BEST3-209ENST00000548658 IDEP14735 1019 aa12.36□□□□□ -0.43
BEST3-209ENST00000548658 PTPN2P17706 415 aa12.36□□□□□ -0.43
BEST3-209ENST00000548658 CLCN5P51795 746 aa12.36□□□□□ -0.43
BEST3-209ENST00000548658 SPAG1Q07617 926 aa12.36□□□□□ -0.43
BEST3-209ENST00000548658 TMEM132DQ14C87 1099 aa12.36□□□□□ -0.43
BEST3-209ENST00000548658 SLC39A4Q6P5W5 647 aa12.36□□□□□ -0.43
BEST3-209ENST00000548658 RSPO2Q6UXX9 243 aaPredicted RBP12.36□□□□□ -0.43
BEST3-209ENST00000548658 GET4Q7L5D6 327 aaPredicted RBP12.36□□□□□ -0.43
BEST3-209ENST00000548658 CCDC65Q8IXS2 484 aa12.36□□□□□ -0.43
BEST3-209ENST00000548658 IQUBQ8NA54 791 aa12.36□□□□□ -0.43
BEST3-209ENST00000548658 KCNG4Q8TDN1 519 aa12.36□□□□□ -0.43
BEST3-209ENST00000548658 POMGNT1Q8WZA1 660 aa12.36□□□□□ -0.43
BEST3-209ENST00000548658 MYADMQ96S97 322 aa12.36□□□□□ -0.43
BEST3-209ENST00000548658 STRA6Q9BX79 667 aa12.36□□□□□ -0.43
BEST3-209ENST00000548658 TNMDQ9H2S6 317 aa12.36□□□□□ -0.43
BEST3-209ENST00000548658 TMEM206Q9H813 350 aa12.36□□□□□ -0.43
BEST3-209ENST00000548658 PANK4Q9NVE7 773 aa12.36□□□□□ -0.43
BEST3-209ENST00000548658 TFIP11Q9UBB9 837 aaKnown RBP12.36□□□□□ -0.43
BEST3-209ENST00000548658 WNT16Q9UBV4 365 aa12.36□□□□□ -0.43
BEST3-209ENST00000548658 FBXL5Q9UKA1 691 aa12.36□□□□□ -0.43
BEST3-209ENST00000548658 FBXL21Q9UKT6 434 aa12.36□□□□□ -0.43
BEST3-209ENST00000548658 CDH7Q9ULB5 785 aa12.36□□□□□ -0.43
BEST3-209ENST00000548658 FRMD3A2A2Y4 597 aa12.35□□□□□ -0.43
BEST3-209ENST00000548658 WDR27A2RRH5 827 aa12.35□□□□□ -0.43
BEST3-209ENST00000548658 ANKRD63C9JTQ0 380 aa12.35□□□□□ -0.43
BEST3-209ENST00000548658 ANHXE9PGG2 379 aa12.35□□□□□ -0.43
BEST3-209ENST00000548658 IL18RAPO95256 599 aa12.35□□□□□ -0.43
BEST3-209ENST00000548658 GCNT3O95395 438 aa12.35□□□□□ -0.43
BEST3-209ENST00000548658 SRFP11831 508 aa12.35□□□□□ -0.43
BEST3-209ENST00000548658 TYMPP19971 482 aa12.35□□□□□ -0.43
BEST3-209ENST00000548658 AARSP49588 968 aaKnown RBP eCLIP12.35□□□□□ -0.43
BEST3-209ENST00000548658 ACOT2P49753 483 aa12.35□□□□□ -0.43
BEST3-209ENST00000548658 PTPN5P54829 565 aa12.35□□□□□ -0.43
BEST3-209ENST00000548658 ARPP19P56211 112 aa12.35□□□□□ -0.43
BEST3-209ENST00000548658 PABPC1LQ4VXU2 614 aaKnown RBP12.35□□□□□ -0.43
BEST3-209ENST00000548658 L1TD1Q5T7N2 865 aaKnown RBP12.35□□□□□ -0.43
BEST3-209ENST00000548658 JADE1Q6IE81 842 aa12.35□□□□□ -0.43
BEST3-209ENST00000548658 DSTYKQ6XUX3 929 aa12.35□□□□□ -0.43
BEST3-209ENST00000548658 MTSS1LQ765P7 747 aa12.35□□□□□ -0.43
BEST3-209ENST00000548658 SYCP3Q8IZU3 236 aa12.35□□□□□ -0.43
BEST3-209ENST00000548658 ELMOD1Q8N336 334 aa12.35□□□□□ -0.43
BEST3-209ENST00000548658 SLC44A3Q8N4M1 653 aa12.35□□□□□ -0.43
BEST3-209ENST00000548658 PDILTQ8N807 584 aa12.35□□□□□ -0.43
BEST3-209ENST00000548658 FGF13Q92913 245 aa12.35□□□□□ -0.43
BEST3-209ENST00000548658 PYM1Q9BRP8 204 aaKnown RBP12.35□□□□□ -0.43
BEST3-209ENST00000548658 CYP4F11Q9HBI6 524 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms