RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 C9orf72Q96LT7 481 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 TTC25Q96NG3 672 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 TMEM237Q96Q45 408 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 RBM15Q96T37 977 aaKnown RBP eCLIP10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 OSBPL8Q9BZF1 889 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 TRIM6Q9C030 488 aaPredicted RBP10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 LRMDAQ9H2I8 198 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 ETNK1Q9HBU6 452 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 TOPORSQ9NS56 1045 aaPredicted RBP10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 SENP1Q9P0U3 644 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 ZBTB21Q9ULJ3 1066 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 TRIM33Q9UPN9 1127 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 USH1CQ9Y6N9 552 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 COL11A2P13942 1736 aaPredicted RBP10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 GSTTP1A0A1W2PQM5 241 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 LIN7AO14910 233 aaPredicted RBP10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 ICAM1P05362 532 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 FDX1P10109 184 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 NSFP46459 744 aaKnown RBP10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 NPTX2P47972 431 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 PSMC5P62195 406 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 SPP2Q13103 211 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 DMP1Q13316 513 aaPredicted RBP10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 SPARCL1Q14515 664 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 RASA2Q15283 850 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 TMED2Q15363 201 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 FAM102BQ5T8I3 360 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 TRIM72Q6ZMU5 477 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 SEPT14Q6ZU15 432 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 MON1BQ7L1V2 547 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 AGGF1Q8N302 714 aaeCLIP10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 EXD1Q8NHP7 514 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 SPIRE2Q8WWL2 714 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 INPP5DQ92835 1189 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 VCPIP1Q96JH7 1222 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 PRMT6Q96LA8 375 aaPredicted RBP10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 NTPCRQ9BSD7 190 aaKnown RBP10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 HEMGNQ9BXL5 484 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 PPCSQ9HAB8 311 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 C17orf75Q9HAS0 396 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 MRPL47Q9HD33 250 aaKnown RBP10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 C1orf112Q9NSG2 853 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 COL20A1Q9P218 1284 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 SMG5Q9UPR3 1016 aaKnown RBP10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 NFASCO94856 1347 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 EXOC1LA0A1B0GW35 172 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 DENND3A2RUS2 1198 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 E7ENQ6 273 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 DCTN3O75935 186 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 CHRM1P11229 460 aaPredicted RBP10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 GCAP28676 217 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 MTMR1Q13613 665 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 MOGSQ13724 837 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 XKR9Q5GH70 373 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 ANKRD20A2Q5SQ80 823 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 LIN9Q5TKA1 542 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 ANKRD20A1Q5TYW2 823 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 ANKRD20A3Q5VUR7 823 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 PPP1R2P3Q6NXS1 205 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 DRICH1Q6PGQ1 229 aaPredicted RBP10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 C15orf39Q6ZRI6 1047 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 MCF2L2Q86YR7 1114 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 NLGN1Q8N2Q7 840 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 GPD1LQ8N335 351 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 IL31RAQ8NI17 732 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 CPA5Q8WXQ8 436 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 LRRC37BQ96QE4 947 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 MYLK2Q9H1R3 596 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 PHTF1Q9UMS5 762 aa10.48□□□□□ -0.73
SMARCD1-205ENST00000548573 DNALI1O14645 258 aaPredicted RBP10.47□□□□□ -0.73
SMARCD1-205ENST00000548573 NDC80O14777 642 aa10.47□□□□□ -0.73
SMARCD1-205ENST00000548573 LUC7L3O95232 432 aaKnown RBP10.47□□□□□ -0.73
SMARCD1-205ENST00000548573 GARTP22102 1010 aa10.47□□□□□ -0.73
SMARCD1-205ENST00000548573 PAX7P23759 505 aa10.47□□□□□ -0.73
SMARCD1-205ENST00000548573 ALDH3A1P30838 453 aa10.47□□□□□ -0.73
SMARCD1-205ENST00000548573 SFNP31947 248 aa10.47□□□□□ -0.73
SMARCD1-205ENST00000548573 CETN2P41208 172 aa10.47□□□□□ -0.73
SMARCD1-205ENST00000548573 JAK3P52333 1124 aa10.47□□□□□ -0.73
SMARCD1-205ENST00000548573 TAS2R40P59535 323 aa10.47□□□□□ -0.73
SMARCD1-205ENST00000548573 MRPS9P82933 396 aaKnown RBP10.47□□□□□ -0.73
SMARCD1-205ENST00000548573 PDK4Q16654 411 aa10.47□□□□□ -0.73
SMARCD1-205ENST00000548573 UGCGQ16739 394 aa10.47□□□□□ -0.73
SMARCD1-205ENST00000548573 CCDC142Q17RM4 750 aa10.47□□□□□ -0.73
SMARCD1-205ENST00000548573 P3H1Q32P28 736 aa10.47□□□□□ -0.73
SMARCD1-205ENST00000548573 MIS18BP1Q6P0N0 1132 aa10.47□□□□□ -0.73
SMARCD1-205ENST00000548573 SLC39A4Q6P5W5 647 aa10.47□□□□□ -0.73
SMARCD1-205ENST00000548573 FAM47EQ6ZV65 393 aa10.47□□□□□ -0.73
SMARCD1-205ENST00000548573 GSTA5Q7RTV2 222 aa10.47□□□□□ -0.73
SMARCD1-205ENST00000548573 VSIG1Q86XK7 387 aa10.47□□□□□ -0.73
SMARCD1-205ENST00000548573 KIRREL3Q8IZU9 778 aa10.47□□□□□ -0.73
SMARCD1-205ENST00000548573 POMGNT1Q8WZA1 660 aa10.47□□□□□ -0.73
SMARCD1-205ENST00000548573 UTP4Q969X6 686 aaKnown RBP10.47□□□□□ -0.73
SMARCD1-205ENST00000548573 GJD4Q96KN9 370 aaPredicted RBP10.47□□□□□ -0.73
SMARCD1-205ENST00000548573 SH2D3AQ9BRG2 576 aa10.47□□□□□ -0.73
SMARCD1-205ENST00000548573 KMT5AQ9NQR1 393 aa10.47□□□□□ -0.73
SMARCD1-205ENST00000548573 CCPG1Q9ULG6 757 aa10.47□□□□□ -0.73
SMARCD1-205ENST00000548573 CHKBQ9Y259 395 aa10.47□□□□□ -0.73
SMARCD1-205ENST00000548573 TMEM150BA6NC51 233 aa10.46□□□□□ -0.73
SMARCD1-205ENST00000548573 WDR64B1ANS9 1081 aa10.46□□□□□ -0.73
SMARCD1-205ENST00000548573 ONECUT3O60422 494 aaPredicted RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms