RNA–Protein interactions for RNA: ENST00000548560.1

SP1-203, Transcript of Sp1 transcription factor, humanhuman

TSL 2

Gene SP1, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-203ENST00000548560 SCFD1Q8WVM8 642 aa9.45□□□□□ -0.9
SP1-203ENST00000548560 RABGGTAQ92696 567 aa9.45□□□□□ -0.9
SP1-203ENST00000548560 PABPC5Q96DU9 382 aaKnown RBP9.45□□□□□ -0.9
SP1-203ENST00000548560 SAAL1Q96ER3 474 aa9.45□□□□□ -0.9
SP1-203ENST00000548560 ZMAT2Q96NC0 199 aaKnown RBP9.45□□□□□ -0.9
SP1-203ENST00000548560 PAAF1Q9BRP4 392 aa9.45□□□□□ -0.9
SP1-203ENST00000548560 CBWD1Q9BRT8 395 aa9.45□□□□□ -0.9
SP1-203ENST00000548560 FAM213AQ9BRX8 229 aa9.45□□□□□ -0.9
SP1-203ENST00000548560 EMILIN2Q9BXX0 1053 aa9.45□□□□□ -0.9
SP1-203ENST00000548560 CXCL16Q9H2A7 254 aa9.45□□□□□ -0.9
SP1-203ENST00000548560 PCIF1Q9H4Z3 704 aa9.45□□□□□ -0.9
SP1-203ENST00000548560 UBE2ZQ9H832 354 aaPredicted RBP9.45□□□□□ -0.9
SP1-203ENST00000548560 GOLGA2P5Q9HBQ8 144 aa9.45□□□□□ -0.9
SP1-203ENST00000548560 RBAKQ9NYW8 714 aaPredicted RBP9.45□□□□□ -0.9
SP1-203ENST00000548560 KIAA1468Q9P260 1216 aa9.45□□□□□ -0.9
SP1-203ENST00000548560 NUB1Q9Y5A7 615 aa9.45□□□□□ -0.9
SP1-203ENST00000548560 PCDHGC5Q9Y5F6 944 aa9.45□□□□□ -0.9
SP1-203ENST00000548560 TSC2P49815 1807 aa9.45□□□□□ -0.9
SP1-203ENST00000548560 GOLGA8IPA6NC78 632 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 C2orf71A6NGG8 1288 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 GOLGA8JA6NMD2 632 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 GOLGA6L22H0YM25 854 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 EXTL3O43909 919 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 RHOBTB3O94955 611 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 CYP3A5P20815 502 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 KCNA5P22460 613 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 ADSSP30520 456 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 MCM4P33991 863 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 GCGRP47871 477 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 SOX4Q06945 474 aaPredicted RBP9.44□□□□□ -0.9
SP1-203ENST00000548560 SPAG1Q07617 926 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 STK4Q13043 487 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 PNOCQ13519 176 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 SNW1Q13573 536 aaKnown RBP9.44□□□□□ -0.9
SP1-203ENST00000548560 KCNB1Q14721 858 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 SURF1Q15526 300 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 PTPN14Q15678 1187 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 DUSP6Q16828 381 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 UPP1Q16831 310 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 FAM171A1Q5VUB5 890 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 JADE1Q6IE81 842 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 ELMSAN1Q6PJG2 1045 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 DCLRE1AQ6PJP8 1040 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 PPFIBP1Q86W92 1011 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 CEP57Q86XR8 500 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 NT5DC4Q86YG4 428 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 BRSK2Q8IWQ3 736 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 EFHBQ8N7U6 833 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 MRPL43Q8N983 215 aaKnown RBP9.44□□□□□ -0.9
SP1-203ENST00000548560 KIAA0895Q8NCT3 520 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 ENGASEQ8NFI3 743 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 ATXN2LQ8WWM7 1075 aaKnown RBP9.44□□□□□ -0.9
SP1-203ENST00000548560 AUTS2Q8WXX7 1259 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 SMARCE1Q969G3 411 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 MARVELD3Q96A59 401 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 C18orf25Q96B23 403 aaPredicted RBP9.44□□□□□ -0.9
SP1-203ENST00000548560 GTPBP4Q9BZE4 634 aaKnown RBP9.44□□□□□ -0.9
SP1-203ENST00000548560 IKZF4Q9H2S9 585 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 ASB7Q9H672 318 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 KIAA1586Q9HCI6 787 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 PRDM6Q9NQX0 595 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.44□□□□□ -0.9
SP1-203ENST00000548560 AGPAT3Q9NRZ7 376 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 HSPBP1Q9NZL4 362 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 TUBGCP4Q9UGJ1 667 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 DERAQ9Y315 318 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 C2CD2Q9Y426 696 aa9.44□□□□□ -0.9
SP1-203ENST00000548560 ZNF233A6NK53 670 aa9.43□□□□□ -0.9
SP1-203ENST00000548560 HIDE1A8MVS5 230 aa9.43□□□□□ -0.9
SP1-203ENST00000548560 F8W810 466 aa9.43□□□□□ -0.9
SP1-203ENST00000548560 PER2O15055 1255 aa9.43□□□□□ -0.9
SP1-203ENST00000548560 CLIC2O15247 247 aa9.43□□□□□ -0.9
SP1-203ENST00000548560 CALUO43852 315 aaPredicted RBP9.43□□□□□ -0.9
SP1-203ENST00000548560 GADD45BO75293 160 aaPredicted RBP9.43□□□□□ -0.9
SP1-203ENST00000548560 PRPF40AO75400 957 aaKnown RBP9.43□□□□□ -0.9
SP1-203ENST00000548560 ADH1AP07327 375 aa9.43□□□□□ -0.9
SP1-203ENST00000548560 NFICP08651 508 aa9.43□□□□□ -0.9
SP1-203ENST00000548560 KLRC2P26717 231 aa9.43□□□□□ -0.9
SP1-203ENST00000548560 CYP2J2P51589 502 aa9.43□□□□□ -0.9
SP1-203ENST00000548560 MRPS5P82675 430 aaKnown RBP9.43□□□□□ -0.9
SP1-203ENST00000548560 DSG1Q02413 1049 aa9.43□□□□□ -0.9
SP1-203ENST00000548560 LLGL2Q6P1M3 1020 aa9.43□□□□□ -0.9
SP1-203ENST00000548560 PDXDC1Q6P996 788 aa9.43□□□□□ -0.9
SP1-203ENST00000548560 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.43□□□□□ -0.9
SP1-203ENST00000548560 CACTINQ8WUQ7 758 aaKnown RBP9.43□□□□□ -0.9
SP1-203ENST00000548560 RIN2Q8WYP3 895 aaPredicted RBP9.43□□□□□ -0.9
SP1-203ENST00000548560 TSC1Q92574 1164 aa9.43□□□□□ -0.9
SP1-203ENST00000548560 CASP10Q92851 521 aa9.43□□□□□ -0.9
SP1-203ENST00000548560 GSDMAQ96QA5 445 aa9.43□□□□□ -0.9
SP1-203ENST00000548560 FNBP1Q96RU3 617 aa9.43□□□□□ -0.9
SP1-203ENST00000548560 TTPALQ9BTX7 342 aa9.43□□□□□ -0.9
SP1-203ENST00000548560 VN1R3Q9BXE9 311 aa9.43□□□□□ -0.9
SP1-203ENST00000548560 GPR62Q9BZJ7 368 aa9.43□□□□□ -0.9
SP1-203ENST00000548560 FAM50BQ9Y247 325 aa9.43□□□□□ -0.9
SP1-203ENST00000548560 R3HCC1Q9Y3T6 440 aaKnown RBP9.43□□□□□ -0.9
SP1-203ENST00000548560 IRAK3Q9Y616 596 aa9.43□□□□□ -0.9
SP1-203ENST00000548560 BRWD1Q9NSI6 2320 aa9.43□□□□□ -0.9
SP1-203ENST00000548560 C2orf16Q68DN1 1984 aa9.43□□□□□ -0.9
SP1-203ENST00000548560 ARHGEF37A1IGU5 675 aa9.42□□□□□ -0.9
SP1-203ENST00000548560 MEFVO15553 781 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms