RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 THNSL2Q86YJ6 484 aa3.42□□□□□ -1.86
DEPDC4-204ENST00000547823 ACTRT2Q8TDY3 377 aa3.42□□□□□ -1.86
DEPDC4-204ENST00000547823 GAB3Q8WWW8 586 aa3.42□□□□□ -1.86
DEPDC4-204ENST00000547823 PDLIM2Q96JY6 352 aa3.42□□□□□ -1.86
DEPDC4-204ENST00000547823 Q96MF0 132 aa3.42□□□□□ -1.86
DEPDC4-204ENST00000547823 SYT17Q9BSW7 474 aa3.42□□□□□ -1.86
DEPDC4-204ENST00000547823 ALOXE3Q9BYJ1 711 aa3.42□□□□□ -1.86
DEPDC4-204ENST00000547823 TMEM74BQ9NUR3 256 aa3.42□□□□□ -1.86
DEPDC4-204ENST00000547823 GOLGB1Q14789 3259 aaKnown RBP3.42□□□□□ -1.86
DEPDC4-204ENST00000547823 RIMS2Q9UQ26 1411 aa3.42□□□□□ -1.86
DEPDC4-204ENST00000547823 C1orf167Q5SNV9 1468 aa3.41□□□□□ -1.86
DEPDC4-204ENST00000547823 USP32Q8NFA0 1604 aa3.41□□□□□ -1.86
DEPDC4-204ENST00000547823 DLC1Q96QB1 1528 aa3.41□□□□□ -1.86
DEPDC4-204ENST00000547823 C1QL1O75973 258 aa3.41□□□□□ -1.86
DEPDC4-204ENST00000547823 PFKMP08237 780 aa3.41□□□□□ -1.86
DEPDC4-204ENST00000547823 SLC9A1P19634 815 aa3.41□□□□□ -1.86
DEPDC4-204ENST00000547823 FLT3LGP49771 235 aa3.41□□□□□ -1.86
DEPDC4-204ENST00000547823 GPR158Q5T848 1215 aa3.41□□□□□ -1.86
DEPDC4-204ENST00000547823 MAPKAPK5Q8IW41 473 aa3.41□□□□□ -1.86
DEPDC4-204ENST00000547823 MSL3Q8N5Y2 521 aaKnown RBP3.41□□□□□ -1.86
DEPDC4-204ENST00000547823 EFHBQ8N7U6 833 aa3.41□□□□□ -1.86
DEPDC4-204ENST00000547823 RTF1Q92541 710 aaKnown RBP3.41□□□□□ -1.86
DEPDC4-204ENST00000547823 BOD1Q96IK1 185 aa3.41□□□□□ -1.86
DEPDC4-204ENST00000547823 UROC1Q96N76 676 aa3.41□□□□□ -1.86
DEPDC4-204ENST00000547823 ORAI2Q96SN7 254 aa3.41□□□□□ -1.86
DEPDC4-204ENST00000547823 DNAJC2Q99543 621 aaKnown RBP3.41□□□□□ -1.86
DEPDC4-204ENST00000547823 ORAI3Q9BRQ5 295 aa3.41□□□□□ -1.86
DEPDC4-204ENST00000547823 TEX101Q9BY14 249 aa3.41□□□□□ -1.86
DEPDC4-204ENST00000547823 GALNT9Q9HCQ5 603 aa3.41□□□□□ -1.86
DEPDC4-204ENST00000547823 CASS4Q9NQ75 786 aa3.41□□□□□ -1.86
DEPDC4-204ENST00000547823 SNTG2Q9NY99 539 aa3.41□□□□□ -1.86
DEPDC4-204ENST00000547823 FOXJ2Q9P0K8 574 aa3.41□□□□□ -1.86
DEPDC4-204ENST00000547823 ZKSCAN5Q9Y2L8 839 aa3.41□□□□□ -1.86
DEPDC4-204ENST00000547823 PCNTO95613 3336 aa3.41□□□□□ -1.86
DEPDC4-204ENST00000547823 NOS1P29475 1434 aa3.41□□□□□ -1.86
DEPDC4-204ENST00000547823 ADGRL3Q9HAR2 1447 aa3.41□□□□□ -1.86
DEPDC4-204ENST00000547823 ATP10DQ9P241 1426 aa3.41□□□□□ -1.86
DEPDC4-204ENST00000547823 ARHGEF5Q12774 1597 aa3.41□□□□□ -1.86
DEPDC4-204ENST00000547823 CROCC2H7BZ55 1655 aa3.4□□□□□ -1.86
DEPDC4-204ENST00000547823 CCDC151A5D8V7 595 aa3.4□□□□□ -1.87
DEPDC4-204ENST00000547823 SNRPA1P09661 255 aaKnown RBP3.4□□□□□ -1.87
DEPDC4-204ENST00000547823 PTGER1P34995 402 aa3.4□□□□□ -1.87
DEPDC4-204ENST00000547823 CRHR1P34998 444 aa3.4□□□□□ -1.87
DEPDC4-204ENST00000547823 SOX10P56693 466 aa3.4□□□□□ -1.87
DEPDC4-204ENST00000547823 OCA2Q04671 838 aa3.4□□□□□ -1.87
DEPDC4-204ENST00000547823 MGAT5Q09328 741 aa3.4□□□□□ -1.87
DEPDC4-204ENST00000547823 SCAPQ12770 1279 aa3.4□□□□□ -1.87
DEPDC4-204ENST00000547823 C2orf27AQ580R0 203 aa3.4□□□□□ -1.87
DEPDC4-204ENST00000547823 SOGA3Q5TF21 947 aa3.4□□□□□ -1.87
DEPDC4-204ENST00000547823 ZNF788Q6ZQV5 615 aa3.4□□□□□ -1.87
DEPDC4-204ENST00000547823 GPR149Q86SP6 731 aa3.4□□□□□ -1.87
DEPDC4-204ENST00000547823 NRAPQ86VF7 1730 aa3.4□□□□□ -1.87
DEPDC4-204ENST00000547823 KIF18BQ86Y91 864 aa3.4□□□□□ -1.87
DEPDC4-204ENST00000547823 TMEM132CQ8N3T6 1108 aa3.4□□□□□ -1.87
DEPDC4-204ENST00000547823 SH2D3CQ8N5H7 860 aa3.4□□□□□ -1.87
DEPDC4-204ENST00000547823 OR56A1Q8NGH5 318 aa3.4□□□□□ -1.87
DEPDC4-204ENST00000547823 PMFBP1Q8TBY8 1022 aa3.4□□□□□ -1.87
DEPDC4-204ENST00000547823 MKL1Q969V6 931 aa3.4□□□□□ -1.87
DEPDC4-204ENST00000547823 ZNF778Q96MU6 729 aa3.4□□□□□ -1.87
DEPDC4-204ENST00000547823 FDXACB1Q9BRP7 624 aaPredicted RBP3.4□□□□□ -1.87
DEPDC4-204ENST00000547823 RNPEPQ9H4A4 650 aa3.4□□□□□ -1.87
DEPDC4-204ENST00000547823 ZMAT4Q9H898 229 aa3.4□□□□□ -1.87
DEPDC4-204ENST00000547823 ARPP21Q9UBL0 812 aaPredicted RBP3.4□□□□□ -1.87
DEPDC4-204ENST00000547823 KIAA1210Q9ULL0 1709 aa3.4□□□□□ -1.87
DEPDC4-204ENST00000547823 USP18Q9UMW8 372 aa3.4□□□□□ -1.87
DEPDC4-204ENST00000547823 MAP3K2Q9Y2U5 619 aa3.4□□□□□ -1.87
DEPDC4-204ENST00000547823 NUMBLQ9Y6R0 609 aa3.4□□□□□ -1.87
DEPDC4-204ENST00000547823 PXDNQ92626 1479 aa3.4□□□□□ -1.87
DEPDC4-204ENST00000547823 FYCO1Q9BQS8 1478 aa3.4□□□□□ -1.87
DEPDC4-204ENST00000547823 THSD7AQ9UPZ6 1657 aa3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 LMTK2Q8IWU2 1503 aa3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 DUOX2Q9NRD8 1548 aa3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 ABCA3Q99758 1704 aa3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 EEA1Q15075 1411 aa3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 LRRC3CA6NJW4 275 aa3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 PRAMEF4O60810 478 aa3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 GAS7O60861 476 aa3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 ITGA10O75578 1167 aa3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 TSPY4P0CV99 314 aa3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 TSPY10P0CW01 314 aa3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 CBSLP0DN79 551 aa3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 WT1P19544 449 aaPredicted RBP3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 CBSP35520 551 aa3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 CLRN1P58418 232 aa3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 UBE3CQ15386 1083 aa3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 AKNAD1Q5T1N1 836 aa3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 ATXN7L2Q5T6C5 722 aaPredicted RBP3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 METRNLQ641Q3 311 aa3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 CREB3L3Q68CJ9 461 aa3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 ZNF425Q6IV72 752 aa3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 DRC7Q8IY82 874 aa3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 COLGALT2Q8IYK4 626 aa3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 HASPINQ8TF76 798 aa3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 ZNF480Q8WV37 535 aa3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 ABHD8Q96I13 439 aa3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 FUBP3Q96I24 572 aaKnown RBP eCLIP3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 SRPK1Q96SB4 655 aaKnown RBP3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 DNAJC7Q99615 494 aa3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 TIMP4Q99727 224 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms