RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 CCL16O15467 120 aa20.27■□□□□ 0.84
CHMP1A-203ENST00000547614 ATF2P15336 505 aa20.27■□□□□ 0.84
CHMP1A-203ENST00000547614 PAX3P23760 479 aa20.27■□□□□ 0.84
CHMP1A-203ENST00000547614 AARSP49588 968 aaKnown RBP eCLIP20.27■□□□□ 0.841e-6■■■■□ 20.6
CHMP1A-203ENST00000547614 SPAG1Q07617 926 aa20.27■□□□□ 0.84
CHMP1A-203ENST00000547614 POSTNQ15063 836 aa20.27■□□□□ 0.84
CHMP1A-203ENST00000547614 SPATA1Q5VX52 437 aa20.27■□□□□ 0.84
CHMP1A-203ENST00000547614 TPGS2Q68CL5 300 aa20.27■□□□□ 0.84
CHMP1A-203ENST00000547614 ADALQ6DHV7 355 aa20.27■□□□□ 0.84
CHMP1A-203ENST00000547614 PANK2Q9BZ23 570 aa20.27■□□□□ 0.84
CHMP1A-203ENST00000547614 ASB7Q9H672 318 aa20.27■□□□□ 0.84
CHMP1A-203ENST00000547614 MRPL44Q9H9J2 332 aaKnown RBP20.27■□□□□ 0.84
CHMP1A-203ENST00000547614 OLFML3Q9NRN5 406 aa20.27■□□□□ 0.84
CHMP1A-203ENST00000547614 FBXL5Q9UKA1 691 aa20.27■□□□□ 0.84
CHMP1A-203ENST00000547614 MAFFQ9ULX9 164 aa20.27■□□□□ 0.84
CHMP1A-203ENST00000547614 DERAQ9Y315 318 aa20.27■□□□□ 0.84
CHMP1A-203ENST00000547614 A0A087X0B3 334 aa20.26■□□□□ 0.83
CHMP1A-203ENST00000547614 ARHGEF37A1IGU5 675 aa20.26■□□□□ 0.83
CHMP1A-203ENST00000547614 WDR27A2RRH5 827 aa20.26■□□□□ 0.83
CHMP1A-203ENST00000547614 YEATS4O95619 227 aa20.26■□□□□ 0.83
CHMP1A-203ENST00000547614 PDGFBP01127 241 aaPredicted RBP20.26■□□□□ 0.83
CHMP1A-203ENST00000547614 HSP90AA1P07900 732 aaKnown RBP20.26■□□□□ 0.83
CHMP1A-203ENST00000547614 ELF1P32519 619 aa20.26■□□□□ 0.83
CHMP1A-203ENST00000547614 NUBP1P53384 320 aa20.26■□□□□ 0.83
CHMP1A-203ENST00000547614 CTXN3Q4LDR2 81 aa20.26■□□□□ 0.83
CHMP1A-203ENST00000547614 ZNF280DQ6N043 979 aa20.26■□□□□ 0.83
CHMP1A-203ENST00000547614 GET4Q7L5D6 327 aaPredicted RBP20.26■□□□□ 0.83
CHMP1A-203ENST00000547614 TCEAL8Q8IYN2 117 aa20.26■□□□□ 0.83
CHMP1A-203ENST00000547614 OXCT2Q9BYC2 517 aaPredicted RBP20.26■□□□□ 0.83
CHMP1A-203ENST00000547614 TFIP11Q9UBB9 837 aaKnown RBP20.26■□□□□ 0.83
CHMP1A-203ENST00000547614 AGO2Q9UKV8 859 aaKnown RBP20.26■□□□□ 0.83
CHMP1A-203ENST00000547614 POLIQ9UNA4 740 aa20.26■□□□□ 0.83
CHMP1A-203ENST00000547614 EXOC7Q9UPT5 735 aa20.26■□□□□ 0.83
CHMP1A-203ENST00000547614 PCDHB13Q9Y5F0 798 aa20.26■□□□□ 0.83
CHMP1A-203ENST00000547614 DOCK6Q96HP0 2047 aa20.26■□□□□ 0.83
CHMP1A-203ENST00000547614 FRMD3A2A2Y4 597 aa20.25■□□□□ 0.83
CHMP1A-203ENST00000547614 ANHXE9PGG2 379 aa20.25■□□□□ 0.83
CHMP1A-203ENST00000547614 OAZ2O95190 189 aa20.25■□□□□ 0.83
CHMP1A-203ENST00000547614 ALCAMQ13740 583 aa20.25■□□□□ 0.83
CHMP1A-203ENST00000547614 IER5LQ5T953 404 aa20.25■□□□□ 0.83
CHMP1A-203ENST00000547614 JADE1Q6IE81 842 aa20.25■□□□□ 0.83
CHMP1A-203ENST00000547614 SLC44A3Q8N4M1 653 aa20.25■□□□□ 0.83
CHMP1A-203ENST00000547614 BEST2Q8NFU1 509 aa20.25■□□□□ 0.83
CHMP1A-203ENST00000547614 FAM212AQ96EL1 285 aa20.25■□□□□ 0.83
CHMP1A-203ENST00000547614 ACCSQ96QU6 501 aa20.25■□□□□ 0.83
CHMP1A-203ENST00000547614 CDH7Q9ULB5 785 aa20.25■□□□□ 0.83
CHMP1A-203ENST00000547614 KCNH3Q9ULD8 1083 aa20.25■□□□□ 0.83
CHMP1A-203ENST00000547614 WDFY4Q6ZS81 3184 aa20.25■□□□□ 0.83
CHMP1A-203ENST00000547614 TISP43B9A030 160 aa20.24■□□□□ 0.83
CHMP1A-203ENST00000547614 PRRG1O14668 218 aa20.24■□□□□ 0.83
CHMP1A-203ENST00000547614 ZSCAN22P10073 491 aaPredicted RBP20.24■□□□□ 0.83
CHMP1A-203ENST00000547614 IDEP14735 1019 aa20.24■□□□□ 0.83
CHMP1A-203ENST00000547614 HOXD11P31277 338 aaPredicted RBP20.24■□□□□ 0.83
CHMP1A-203ENST00000547614 ACOT2P49753 483 aa20.24■□□□□ 0.83
CHMP1A-203ENST00000547614 VCPP55072 806 aaKnown RBP20.24■□□□□ 0.83
CHMP1A-203ENST00000547614 NTHL1P78549 312 aa20.24■□□□□ 0.83
CHMP1A-203ENST00000547614 NHLH1Q02575 133 aa20.24■□□□□ 0.83
CHMP1A-203ENST00000547614 YWHAHQ04917 246 aaPredicted RBP20.24■□□□□ 0.83
CHMP1A-203ENST00000547614 L1TD1Q5T7N2 865 aaKnown RBP20.24■□□□□ 0.83
CHMP1A-203ENST00000547614 PDILTQ8N807 584 aa20.24■□□□□ 0.83
CHMP1A-203ENST00000547614 RSAD2Q8WXG1 361 aa20.24■□□□□ 0.83
CHMP1A-203ENST00000547614 LRRC27Q9C0I9 530 aa20.24■□□□□ 0.83
CHMP1A-203ENST00000547614 CUEDC2Q9H467 287 aa20.24■□□□□ 0.83
CHMP1A-203ENST00000547614 DNMT3BQ9UBC3 853 aaKnown RBP20.24■□□□□ 0.83
CHMP1A-203ENST00000547614 C2CD2Q9Y426 696 aa20.24■□□□□ 0.83
CHMP1A-203ENST00000547614 CUTAO60888 179 aa20.23■□□□□ 0.83
CHMP1A-203ENST00000547614 LRG1P02750 347 aa20.23■□□□□ 0.83
CHMP1A-203ENST00000547614 ADSSP30520 456 aa20.23■□□□□ 0.83
CHMP1A-203ENST00000547614 CLCN5P51795 746 aa20.23■□□□□ 0.83
CHMP1A-203ENST00000547614 PTPN5P54829 565 aa20.23■□□□□ 0.83
CHMP1A-203ENST00000547614 ARPP19P56211 112 aa20.23■□□□□ 0.83
CHMP1A-203ENST00000547614 LILRA4P59901 499 aa20.23■□□□□ 0.83
CHMP1A-203ENST00000547614 HTR4Q13639 388 aa20.23■□□□□ 0.83
CHMP1A-203ENST00000547614 TMEM132DQ14C87 1099 aa20.23■□□□□ 0.83
CHMP1A-203ENST00000547614 PABPC1LQ4VXU2 614 aaKnown RBP20.23■□□□□ 0.83
CHMP1A-203ENST00000547614 ATL3Q6DD88 541 aa20.23■□□□□ 0.83
CHMP1A-203ENST00000547614 KMT2EQ8IZD2 1858 aa20.23■□□□□ 0.83
CHMP1A-203ENST00000547614 POMGNT1Q8WZA1 660 aa20.23■□□□□ 0.83
CHMP1A-203ENST00000547614 FGF13Q92913 245 aa20.23■□□□□ 0.83
CHMP1A-203ENST00000547614 TNMDQ9H2S6 317 aa20.23■□□□□ 0.83
CHMP1A-203ENST00000547614 MFSD1Q9H3U5 465 aa20.23■□□□□ 0.83
CHMP1A-203ENST00000547614 AVENQ9NQS1 362 aaPredicted RBP20.23■□□□□ 0.83
CHMP1A-203ENST00000547614 PANK4Q9NVE7 773 aa20.23■□□□□ 0.83
CHMP1A-203ENST00000547614 WNT16Q9UBV4 365 aa20.23■□□□□ 0.83
CHMP1A-203ENST00000547614 AFF4Q9UHB7 1163 aaKnown RBP20.23■□□□□ 0.83
CHMP1A-203ENST00000547614 PIEZO1Q92508 2521 aa20.22■□□□□ 0.83
CHMP1A-203ENST00000547614 ANO9A1A5B4 782 aa20.22■□□□□ 0.83
CHMP1A-203ENST00000547614 PIRO00625 290 aa20.22■□□□□ 0.83
CHMP1A-203ENST00000547614 GCNT3O95395 438 aa20.22■□□□□ 0.83
CHMP1A-203ENST00000547614 F13A1P00488 732 aa20.22■□□□□ 0.83
CHMP1A-203ENST00000547614 SRFP11831 508 aa20.22■□□□□ 0.83
CHMP1A-203ENST00000547614 PTPN2P17706 415 aa20.22■□□□□ 0.83
CHMP1A-203ENST00000547614 TYMPP19971 482 aa20.22■□□□□ 0.83
CHMP1A-203ENST00000547614 GUCY2FP51841 1108 aa20.22■□□□□ 0.83
CHMP1A-203ENST00000547614 KCNA1Q09470 495 aa20.22■□□□□ 0.83
CHMP1A-203ENST00000547614 E2F4Q16254 413 aa20.22■□□□□ 0.83
CHMP1A-203ENST00000547614 C9orf57Q5W0N0 161 aa20.22■□□□□ 0.83
CHMP1A-203ENST00000547614 ASTLQ6HA08 431 aaPredicted RBP20.22■□□□□ 0.83
CHMP1A-203ENST00000547614 CRELD2Q6UXH1 353 aaPredicted RBP20.22■□□□□ 0.83
CHMP1A-203ENST00000547614 DSTYKQ6XUX3 929 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms