RNA–Protein interactions for RNA: ENST00000547323.1

GPN3-205, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-205ENST00000547323 INTS8Q75QN2 995 aaKnown RBP22.53■■□□□ 1.2
GPN3-205ENST00000547323 VPS52Q8N1B4 723 aa22.53■■□□□ 1.2
GPN3-205ENST00000547323 MYLIPQ8WY64 445 aa22.53■■□□□ 1.2
GPN3-205ENST00000547323 ANKRD36BP1Q96IX9 119 aa22.53■■□□□ 1.2
GPN3-205ENST00000547323 FUCA2Q9BTY2 467 aa22.53■■□□□ 1.2
GPN3-205ENST00000547323 AGAP1Q9UPQ3 857 aa22.53■■□□□ 1.2
GPN3-205ENST00000547323 CARNS1A5YM72 827 aa22.52■■□□□ 1.2
GPN3-205ENST00000547323 TMEM189-UBE2V1I3L0A0 370 aa22.52■■□□□ 1.2
GPN3-205ENST00000547323 TNNC2P02585 160 aa22.52■■□□□ 1.2
GPN3-205ENST00000547323 POLR2BP30876 1174 aaKnown RBP22.52■■□□□ 1.2
GPN3-205ENST00000547323 IRS1P35568 1242 aa22.52■■□□□ 1.2
GPN3-205ENST00000547323 MCCD1P59942 119 aaPredicted RBP22.52■■□□□ 1.2
GPN3-205ENST00000547323 ANO6Q4KMQ2 910 aa22.52■■□□□ 1.2
GPN3-205ENST00000547323 CT47A1Q5JQC4 288 aaPredicted RBP22.52■■□□□ 1.2
GPN3-205ENST00000547323 TRAPPC11Q7Z392 1133 aa22.52■■□□□ 1.2
GPN3-205ENST00000547323 IRF2BP1Q8IU81 584 aa22.52■■□□□ 1.2
GPN3-205ENST00000547323 AUTS2Q8WXX7 1259 aa22.52■■□□□ 1.2
GPN3-205ENST00000547323 ARMCX3Q9UH62 379 aaPredicted RBP22.52■■□□□ 1.2
GPN3-205ENST00000547323 PUF60Q9UHX1 559 aaKnown RBP22.52■■□□□ 1.2
GPN3-205ENST00000547323 LZTS1Q9Y250 596 aa22.52■■□□□ 1.2
GPN3-205ENST00000547323 PRRC2BQ5JSZ5 2229 aaKnown RBP22.51■■□□□ 1.19
GPN3-205ENST00000547323 VWA8A3KMH1 1905 aa22.51■■□□□ 1.19
GPN3-205ENST00000547323 SPTLC1O15269 473 aa22.51■■□□□ 1.19
GPN3-205ENST00000547323 CST3P01034 146 aaPredicted RBP22.51■■□□□ 1.19
GPN3-205ENST00000547323 C4BPAP04003 597 aaKnown RBP22.51■■□□□ 1.19
GPN3-205ENST00000547323 KRT19P08727 400 aa22.51■■□□□ 1.19
GPN3-205ENST00000547323 UBE3AQ05086 875 aa22.51■■□□□ 1.19
GPN3-205ENST00000547323 PPP3CAQ08209 521 aa22.51■■□□□ 1.19
GPN3-205ENST00000547323 CCDC40Q4G0X9 1142 aa22.51■■□□□ 1.19
GPN3-205ENST00000547323 TIGD5Q53EQ6 642 aa22.51■■□□□ 1.19
GPN3-205ENST00000547323 RNF168Q8IYW5 571 aaPredicted RBP22.51■■□□□ 1.19
GPN3-205ENST00000547323 MMRN2Q9H8L6 949 aa22.51■■□□□ 1.19
GPN3-205ENST00000547323 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.51■■□□□ 1.19
GPN3-205ENST00000547323 CCDC192P0DO97 292 aa22.5■■□□□ 1.19
GPN3-205ENST00000547323 IGFBP4P22692 258 aa22.5■■□□□ 1.19
GPN3-205ENST00000547323 GCLMP48507 274 aa22.5■■□□□ 1.19
GPN3-205ENST00000547323 LILRA4P59901 499 aa22.5■■□□□ 1.19
GPN3-205ENST00000547323 TPD52L1Q16890 204 aaPredicted RBP22.5■■□□□ 1.19
GPN3-205ENST00000547323 HSP90AA4PQ58FG1 418 aa22.5■■□□□ 1.19
GPN3-205ENST00000547323 FAM171A1Q5VUB5 890 aa22.5■■□□□ 1.19
GPN3-205ENST00000547323 TDRD10Q5VZ19 366 aaKnown RBP22.5■■□□□ 1.19
GPN3-205ENST00000547323 FRMD5Q7Z6J6 570 aa22.5■■□□□ 1.19
GPN3-205ENST00000547323 MRPL38Q96DV4 380 aaKnown RBP22.5■■□□□ 1.19
GPN3-205ENST00000547323 TLR9Q9NR96 1032 aa22.5■■□□□ 1.19
GPN3-205ENST00000547323 ITGA11Q9UKX5 1188 aa22.5■■□□□ 1.19
GPN3-205ENST00000547323 NUB1Q9Y5A7 615 aa22.5■■□□□ 1.19
GPN3-205ENST00000547323 IKBKBO14920 756 aa22.49■■□□□ 1.19
GPN3-205ENST00000547323 FGFR1OPO95684 399 aaKnown RBP22.49■■□□□ 1.19
GPN3-205ENST00000547323 RBP5P82980 135 aa22.49■■□□□ 1.19
GPN3-205ENST00000547323 SV2AQ7L0J3 742 aa22.49■■□□□ 1.19
GPN3-205ENST00000547323 TMC7Q7Z402 723 aa22.49■■□□□ 1.19
GPN3-205ENST00000547323 CREBRFQ8IUR6 639 aa22.49■■□□□ 1.19
GPN3-205ENST00000547323 ENOX1Q8TC92 643 aaKnown RBP22.49■■□□□ 1.19
GPN3-205ENST00000547323 MICAL1Q8TDZ2 1067 aa22.49■■□□□ 1.19
GPN3-205ENST00000547323 ELMO3Q96BJ8 720 aa22.49■■□□□ 1.19
GPN3-205ENST00000547323 TCF25Q9BQ70 676 aa22.49■■□□□ 1.19
GPN3-205ENST00000547323 LMAN2LQ9H0V9 348 aa22.49■■□□□ 1.19
GPN3-205ENST00000547323 ZBP1Q9H171 429 aa22.49■■□□□ 1.19
GPN3-205ENST00000547323 SAMSN1Q9NSI8 373 aaKnown RBP22.49■■□□□ 1.19
GPN3-205ENST00000547323 MTCH2Q9Y6C9 303 aa22.49■■□□□ 1.19
GPN3-205ENST00000547323 FSCN2O14926 492 aa22.48■■□□□ 1.19
GPN3-205ENST00000547323 PHACTR2O75167 634 aa22.48■■□□□ 1.19
GPN3-205ENST00000547323 VNN1O95497 513 aa22.48■■□□□ 1.19
GPN3-205ENST00000547323 CXCL14O95715 111 aa22.48■■□□□ 1.19
GPN3-205ENST00000547323 SOD2P04179 222 aa22.48■■□□□ 1.19
GPN3-205ENST00000547323 ENPEPQ07075 957 aa22.48■■□□□ 1.19
GPN3-205ENST00000547323 BIRC3Q13489 604 aa22.48■■□□□ 1.19
GPN3-205ENST00000547323 DCAF17Q5H9S7 520 aaPredicted RBP22.48■■□□□ 1.19
GPN3-205ENST00000547323 TCERG1LQ5VWI1 586 aa22.48■■□□□ 1.19
GPN3-205ENST00000547323 PLPP4Q5VZY2 271 aa22.48■■□□□ 1.19
GPN3-205ENST00000547323 C15orf39Q6ZRI6 1047 aa22.48■■□□□ 1.19
GPN3-205ENST00000547323 CEP57Q86XR8 500 aa22.48■■□□□ 1.19
GPN3-205ENST00000547323 SLC35C1Q96A29 364 aa22.48■■□□□ 1.19
GPN3-205ENST00000547323 SUSD3Q96L08 255 aa22.48■■□□□ 1.19
GPN3-205ENST00000547323 GAS2L1Q99501 681 aaPredicted RBP22.48■■□□□ 1.19
GPN3-205ENST00000547323 HERC2P3Q9BVR0 1158 aa22.48■■□□□ 1.19
GPN3-205ENST00000547323 METTL14Q9HCE5 456 aaKnown RBP22.48■■□□□ 1.19
GPN3-205ENST00000547323 ENTPD7Q9NQZ7 604 aa22.48■■□□□ 1.19
GPN3-205ENST00000547323 CHST7Q9NS84 486 aa22.48■■□□□ 1.19
GPN3-205ENST00000547323 SF3B1O75533 1304 aaKnown RBP eCLIP22.48■■□□□ 1.19
GPN3-205ENST00000547323 HIDE1A8MVS5 230 aa22.47■■□□□ 1.19
GPN3-205ENST00000547323 C2CD2LO14523 706 aa22.47■■□□□ 1.19
GPN3-205ENST00000547323 GNA14O95837 355 aa22.47■■□□□ 1.19
GPN3-205ENST00000547323 CTSAP10619 480 aa22.47■■□□□ 1.19
GPN3-205ENST00000547323 POU3F3P20264 500 aaPredicted RBP22.47■■□□□ 1.19
GPN3-205ENST00000547323 TKTP29401 623 aaKnown RBP22.47■■□□□ 1.19
GPN3-205ENST00000547323 AARSP49588 968 aaKnown RBP eCLIP22.47■■□□□ 1.19
GPN3-205ENST00000547323 AP3M2P53677 418 aa22.47■■□□□ 1.19
GPN3-205ENST00000547323 MYL6P60660 151 aa22.47■■□□□ 1.19
GPN3-205ENST00000547323 PTPROQ16827 1216 aa22.47■■□□□ 1.19
GPN3-205ENST00000547323 USP41Q3LFD5 358 aa22.47■■□□□ 1.19
GPN3-205ENST00000547323 ZACNQ401N2 412 aa22.47■■□□□ 1.19
GPN3-205ENST00000547323 RTP2Q5QGT7 225 aa22.47■■□□□ 1.19
GPN3-205ENST00000547323 KIAA0319Q5VV43 1072 aa22.47■■□□□ 1.19
GPN3-205ENST00000547323 USP37Q86T82 979 aa22.47■■□□□ 1.19
GPN3-205ENST00000547323 TRIM59Q8IWR1 403 aa22.47■■□□□ 1.19
GPN3-205ENST00000547323 CNOT6LQ96LI5 555 aaKnown RBP22.47■■□□□ 1.19
GPN3-205ENST00000547323 THAP9Q9H5L6 903 aa22.47■■□□□ 1.19
GPN3-205ENST00000547323 NFE2L3Q9Y4A8 694 aa22.47■■□□□ 1.19
GPN3-205ENST00000547323 TRAPPC3O43617 180 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms