RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 TRAF3IP3Q9Y228 551 aa13.12□□□□□ -0.31
HDAC7-226ENST00000547259 ANK1P16157 1881 aa13.12□□□□□ -0.31
HDAC7-226ENST00000547259 CITO14578 2027 aa13.12□□□□□ -0.31
HDAC7-226ENST00000547259 WDR87Q6ZQQ6 2873 aa13.11□□□□□ -0.31
HDAC7-226ENST00000547259 PDCD11Q14690 1871 aaKnown RBP13.11□□□□□ -0.31
HDAC7-226ENST00000547259 A0A1B0GUA9 196 aa13.11□□□□□ -0.31
HDAC7-226ENST00000547259 C1RP00736 705 aa13.11□□□□□ -0.31
HDAC7-226ENST00000547259 NR3C1P04150 777 aa13.11□□□□□ -0.31
HDAC7-226ENST00000547259 MCF2P10911 925 aa13.11□□□□□ -0.31
HDAC7-226ENST00000547259 GARTP22102 1010 aa13.11□□□□□ -0.31
HDAC7-226ENST00000547259 PROZP22891 400 aa13.11□□□□□ -0.31
HDAC7-226ENST00000547259 KLRC2P26717 231 aa13.11□□□□□ -0.31
HDAC7-226ENST00000547259 HOXA11P31270 313 aaPredicted RBP13.11□□□□□ -0.31
HDAC7-226ENST00000547259 CYP2J2P51589 502 aa13.11□□□□□ -0.31
HDAC7-226ENST00000547259 TPD52L1Q16890 204 aaPredicted RBP13.11□□□□□ -0.31
HDAC7-226ENST00000547259 EDRF1Q3B7T1 1238 aa13.11□□□□□ -0.31
HDAC7-226ENST00000547259 DCAF4L1Q3SXM0 396 aa13.11□□□□□ -0.31
HDAC7-226ENST00000547259 ANKRD40Q6AI12 368 aa13.11□□□□□ -0.31
HDAC7-226ENST00000547259 GPR149Q86SP6 731 aa13.11□□□□□ -0.31
HDAC7-226ENST00000547259 HACE1Q8IYU2 909 aa13.11□□□□□ -0.31
HDAC7-226ENST00000547259 PHOX2BQ99453 314 aa13.11□□□□□ -0.31
HDAC7-226ENST00000547259 CBWD1Q9BRT8 395 aa13.11□□□□□ -0.31
HDAC7-226ENST00000547259 CDT1Q9H211 546 aa13.11□□□□□ -0.31
HDAC7-226ENST00000547259 PCIF1Q9H4Z3 704 aa13.11□□□□□ -0.31
HDAC7-226ENST00000547259 IGSF9Q9P2J2 1179 aa13.11□□□□□ -0.31
HDAC7-226ENST00000547259 LIMD1Q9UGP4 676 aa13.11□□□□□ -0.31
HDAC7-226ENST00000547259 INPP5FQ9Y2H2 1132 aa13.11□□□□□ -0.31
HDAC7-226ENST00000547259 FAN1Q9Y2M0 1017 aa13.11□□□□□ -0.31
HDAC7-226ENST00000547259 PCDHB2Q9Y5E7 798 aa13.11□□□□□ -0.31
HDAC7-226ENST00000547259 H0Y858 1186 aa13.1□□□□□ -0.31
HDAC7-226ENST00000547259 KIAA0391O15091 583 aaKnown RBP13.1□□□□□ -0.31
HDAC7-226ENST00000547259 CAVIN2O95810 425 aa13.1□□□□□ -0.31
HDAC7-226ENST00000547259 EPCAMP16422 314 aa13.1□□□□□ -0.31
HDAC7-226ENST00000547259 NR2F2P24468 414 aa13.1□□□□□ -0.31
HDAC7-226ENST00000547259 RPL13P26373 211 aaKnown RBP13.1□□□□□ -0.31
HDAC7-226ENST00000547259 ADSSP30520 456 aa13.1□□□□□ -0.31
HDAC7-226ENST00000547259 ZNF165P49910 485 aa13.1□□□□□ -0.31
HDAC7-226ENST00000547259 MYL5Q02045 173 aa13.1□□□□□ -0.31
HDAC7-226ENST00000547259 MCL1Q07820 350 aa13.1□□□□□ -0.31
HDAC7-226ENST00000547259 TDGQ13569 410 aa13.1□□□□□ -0.31
HDAC7-226ENST00000547259 TTI2Q6NXR4 508 aa13.1□□□□□ -0.31
HDAC7-226ENST00000547259 FOXR2Q6PJQ5 311 aa13.1□□□□□ -0.31
HDAC7-226ENST00000547259 MRPL10Q7Z7H8 261 aaKnown RBP13.1□□□□□ -0.31
HDAC7-226ENST00000547259 C12orf56Q8IXR9 622 aa13.1□□□□□ -0.31
HDAC7-226ENST00000547259 CSGALNACT2Q8N6G5 542 aa13.1□□□□□ -0.31
HDAC7-226ENST00000547259 AOPEPQ8N6M6 819 aa13.1□□□□□ -0.31
HDAC7-226ENST00000547259 CMASQ8NFW8 434 aaPredicted RBP13.1□□□□□ -0.31
HDAC7-226ENST00000547259 NXPE3Q969Y0 559 aa13.1□□□□□ -0.31
HDAC7-226ENST00000547259 SAAL1Q96ER3 474 aa13.1□□□□□ -0.31
HDAC7-226ENST00000547259 BPIFA3Q9BQP9 254 aa13.1□□□□□ -0.31
HDAC7-226ENST00000547259 RTP3Q9BQQ7 232 aa13.1□□□□□ -0.31
HDAC7-226ENST00000547259 EIF2AQ9BY44 585 aaKnown RBP13.1□□□□□ -0.31
HDAC7-226ENST00000547259 RHOBTB2Q9BYZ6 727 aa13.1□□□□□ -0.31
HDAC7-226ENST00000547259 RSAD1Q9HA92 442 aa13.1□□□□□ -0.31
HDAC7-226ENST00000547259 PTPRHQ9HD43 1115 aa13.1□□□□□ -0.31
HDAC7-226ENST00000547259 HSPBP1Q9NZL4 362 aa13.1□□□□□ -0.31
HDAC7-226ENST00000547259 AGO2Q9UKV8 859 aaKnown RBP13.1□□□□□ -0.31
HDAC7-226ENST00000547259 STYXL1Q9Y6J8 313 aa13.1□□□□□ -0.31
HDAC7-226ENST00000547259 MTCL1Q9Y4B5 1905 aaKnown RBP13.09□□□□□ -0.31
HDAC7-226ENST00000547259 A0A0B4J269 797 aa13.09□□□□□ -0.31
HDAC7-226ENST00000547259 GOLGA8IPA6NC78 632 aa13.09□□□□□ -0.31
HDAC7-226ENST00000547259 GOLGA8JA6NMD2 632 aa13.09□□□□□ -0.31
HDAC7-226ENST00000547259 ABLIM1O14639 778 aa13.09□□□□□ -0.31
HDAC7-226ENST00000547259 CETN3O15182 167 aa13.09□□□□□ -0.31
HDAC7-226ENST00000547259 OGTO15294 1046 aa13.09□□□□□ -0.31
HDAC7-226ENST00000547259 EXOC3O60645 756 aa13.09□□□□□ -0.31
HDAC7-226ENST00000547259 URODP06132 367 aa13.09□□□□□ -0.31
HDAC7-226ENST00000547259 ADH1AP07327 375 aa13.09□□□□□ -0.31
HDAC7-226ENST00000547259 NBL1P41271 181 aa13.09□□□□□ -0.31
HDAC7-226ENST00000547259 SLC11A1P49279 550 aa13.09□□□□□ -0.31
HDAC7-226ENST00000547259 CLCN4P51793 760 aa13.09□□□□□ -0.31
HDAC7-226ENST00000547259 FKBP3Q00688 224 aaKnown RBP13.09□□□□□ -0.31
HDAC7-226ENST00000547259 HSP90AA2PQ14568 343 aaPredicted RBP13.09□□□□□ -0.31
HDAC7-226ENST00000547259 PTPN14Q15678 1187 aa13.09□□□□□ -0.31
HDAC7-226ENST00000547259 NFIL3Q16649 462 aa13.09□□□□□ -0.31
HDAC7-226ENST00000547259 UBXN11Q5T124 520 aa13.09□□□□□ -0.31
HDAC7-226ENST00000547259 CEP135Q66GS9 1140 aa13.09□□□□□ -0.31
HDAC7-226ENST00000547259 TMC5Q6UXY8 1006 aa13.09□□□□□ -0.31
HDAC7-226ENST00000547259 DENND4AQ7Z401 1863 aa13.09□□□□□ -0.31
HDAC7-226ENST00000547259 SLC9A9Q8IVB4 645 aa13.09□□□□□ -0.31
HDAC7-226ENST00000547259 GPD1LQ8N335 351 aa13.09□□□□□ -0.31
HDAC7-226ENST00000547259 C12orf76Q8N812 135 aaPredicted RBP13.09□□□□□ -0.31
HDAC7-226ENST00000547259 XXYLT1Q8NBI6 393 aa13.09□□□□□ -0.31
HDAC7-226ENST00000547259 ENOX1Q8TC92 643 aaKnown RBP13.09□□□□□ -0.31
HDAC7-226ENST00000547259 FAM200AQ8TCP9 573 aa13.09□□□□□ -0.31
HDAC7-226ENST00000547259 HDAC7Q8WUI4 952 aa13.09□□□□□ -0.31
HDAC7-226ENST00000547259 LPPQ93052 612 aa13.09□□□□□ -0.31
HDAC7-226ENST00000547259 SNX27Q96L92 541 aa13.09□□□□□ -0.31
HDAC7-226ENST00000547259 KLHL5Q96PQ7 755 aa13.09□□□□□ -0.31
HDAC7-226ENST00000547259 DUSP9Q99956 384 aaKnown RBP13.09□□□□□ -0.31
HDAC7-226ENST00000547259 HAPLN2Q9GZV7 340 aa13.09□□□□□ -0.31
HDAC7-226ENST00000547259 FAM86C1Q9NVL1 165 aa13.09□□□□□ -0.31
HDAC7-226ENST00000547259 GVINP1Q7Z2Y8 2422 aa13.09□□□□□ -0.31
HDAC7-226ENST00000547259 TDRD15B5MCY1 1934 aaKnown RBP13.08□□□□□ -0.32
HDAC7-226ENST00000547259 SMTNL1A8MU46 457 aa13.08□□□□□ -0.32
HDAC7-226ENST00000547259 BECN2A8MW95 431 aa13.08□□□□□ -0.32
HDAC7-226ENST00000547259 EXTL3O43909 919 aa13.08□□□□□ -0.32
HDAC7-226ENST00000547259 FGFR1OPO95684 399 aaKnown RBP13.08□□□□□ -0.32
HDAC7-226ENST00000547259 LDHAP00338 332 aaKnown RBP13.08□□□□□ -0.32
HDAC7-226ENST00000547259 PDGFBP01127 241 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms