RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 TUBB6Q9BUF5 446 aa11.35□□□□□ -0.59
NPAS3-205ENST00000547068 CCDC28BQ9BUN5 200 aa11.35□□□□□ -0.59
NPAS3-205ENST00000547068 MMADHCQ9H3L0 296 aaPredicted RBP11.35□□□□□ -0.59
NPAS3-205ENST00000547068 CYLDQ9NQC7 956 aa11.35□□□□□ -0.59
NPAS3-205ENST00000547068 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.35□□□□□ -0.59
NPAS3-205ENST00000547068 NUMBLQ9Y6R0 609 aa11.35□□□□□ -0.59
NPAS3-205ENST00000547068 LTBP3Q9NS15 1303 aa11.35□□□□□ -0.59
NPAS3-205ENST00000547068 FER1L6Q2WGJ9 1857 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 EXOC1LA0A1B0GW35 172 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 NFKBIEO00221 500 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 MED24O75448 989 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 GCNT3O95395 438 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 GAS8O95995 478 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 KRT15P19012 456 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 CA4P22748 312 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 TPP2P29144 1249 aaPredicted RBP11.34□□□□□ -0.59
NPAS3-205ENST00000547068 SH3BGRP55822 239 aaPredicted RBP11.34□□□□□ -0.59
NPAS3-205ENST00000547068 GTF2IP78347 998 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 THOC5Q13769 683 aaKnown RBP11.34□□□□□ -0.59
NPAS3-205ENST00000547068 PTK6Q13882 451 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 KIF22Q14807 665 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 ACBD5Q5T8D3 534 aaPredicted RBP11.34□□□□□ -0.59
NPAS3-205ENST00000547068 PHLDB3Q6NSJ2 640 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 CYP4F22Q6NT55 531 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 CPNE8Q86YQ8 564 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 NIM1KQ8IY84 436 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 PDCD7Q8N8D1 485 aaKnown RBP11.34□□□□□ -0.59
NPAS3-205ENST00000547068 CHST7Q9NS84 486 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 ARL8BQ9NVJ2 186 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 APEX2Q9UBZ4 518 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 DCTN4Q9UJW0 460 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 SMG5Q9UPR3 1016 aaKnown RBP11.34□□□□□ -0.59
NPAS3-205ENST00000547068 WASF2Q9Y6W5 498 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 UMODL1Q5DID0 1318 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 ZMYM2Q9UBW7 1377 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 FOXN3O00409 490 aaPredicted RBP11.34□□□□□ -0.59
NPAS3-205ENST00000547068 ATMINO43313 823 aaPredicted RBP11.34□□□□□ -0.59
NPAS3-205ENST00000547068 SORBS3O60504 671 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 TROVE2P10155 538 aaKnown RBP eCLIP11.34□□□□□ -0.59
NPAS3-205ENST00000547068 PSMC2P35998 433 aaKnown RBP11.34□□□□□ -0.59
NPAS3-205ENST00000547068 CDK7P50613 346 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 SLC18A1P54219 525 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 KCNA1Q09470 495 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 PABPC4Q13310 644 aaKnown RBP eCLIP11.34□□□□□ -0.59
NPAS3-205ENST00000547068 TCEAL1Q15170 157 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 PLEKHG4Q58EX7 1191 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 SYDE1Q6ZW31 735 aaPredicted RBP11.34□□□□□ -0.59
NPAS3-205ENST00000547068 KIAA0825Q8IV33 1275 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 C4orf33Q8N1A6 199 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 ZNF398Q8TD17 642 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 CNKSR2Q8WXI2 1034 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 ATG4AQ8WYN0 398 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 PTCD3Q96EY7 689 aaKnown RBP11.34□□□□□ -0.59
NPAS3-205ENST00000547068 DYDC2Q96IM9 177 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 NSL1Q96IY1 281 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 HIC2Q96JB3 615 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 BTBD6Q96KE9 485 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 OLFM3Q96PB7 478 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 PLVAPQ9BX97 442 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 INTS2Q9H0H0 1204 aaKnown RBP11.34□□□□□ -0.59
NPAS3-205ENST00000547068 RIOX1Q9H6W3 641 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 ANGPTL2Q9UKU9 493 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 JAG2Q9Y219 1238 aa11.34□□□□□ -0.59
NPAS3-205ENST00000547068 USP17L5A8MUK1 530 aa11.33□□□□□ -0.6
NPAS3-205ENST00000547068 FSCN2O14926 492 aa11.33□□□□□ -0.6
NPAS3-205ENST00000547068 FAM200BP0CF97 657 aa11.33□□□□□ -0.6
NPAS3-205ENST00000547068 CETN2P41208 172 aa11.33□□□□□ -0.6
NPAS3-205ENST00000547068 DSG1Q02413 1049 aa11.33□□□□□ -0.6
NPAS3-205ENST00000547068 SLC1A5Q15758 541 aa11.33□□□□□ -0.6
NPAS3-205ENST00000547068 CBWD6Q4V339 395 aa11.33□□□□□ -0.6
NPAS3-205ENST00000547068 CBWD3Q5JTY5 395 aa11.33□□□□□ -0.6
NPAS3-205ENST00000547068 CBWD5Q5RIA9 395 aa11.33□□□□□ -0.6
NPAS3-205ENST00000547068 FRMPD2Q68DX3 1309 aaPredicted RBP11.33□□□□□ -0.6
NPAS3-205ENST00000547068 ZNF746Q6NUN9 644 aaPredicted RBP11.33□□□□□ -0.6
NPAS3-205ENST00000547068 IZUMO2Q6UXV1 221 aa11.33□□□□□ -0.6
NPAS3-205ENST00000547068 CEP128Q6ZU80 1094 aa11.33□□□□□ -0.6
NPAS3-205ENST00000547068 DZIP1Q86YF9 867 aaKnown RBP11.33□□□□□ -0.6
NPAS3-205ENST00000547068 STKLD1Q8NE28 680 aa11.33□□□□□ -0.6
NPAS3-205ENST00000547068 GRK7Q8WTQ7 553 aa11.33□□□□□ -0.6
NPAS3-205ENST00000547068 ZNF75CPQ92670 426 aaPredicted RBP11.33□□□□□ -0.6
NPAS3-205ENST00000547068 MIS12Q9H081 205 aa11.33□□□□□ -0.6
NPAS3-205ENST00000547068 KIAA1586Q9HCI6 787 aa11.33□□□□□ -0.6
NPAS3-205ENST00000547068 IL1RAPL1Q9NZN1 696 aa11.33□□□□□ -0.6
NPAS3-205ENST00000547068 A8MXQ7 604 aa11.33□□□□□ -0.6
NPAS3-205ENST00000547068 MAN1A1P33908 653 aa11.33□□□□□ -0.6
NPAS3-205ENST00000547068 STAT3P40763 770 aa11.33□□□□□ -0.6
NPAS3-205ENST00000547068 PSMC6P62333 389 aa11.33□□□□□ -0.6
NPAS3-205ENST00000547068 PPP2R5CQ13362 524 aa11.33□□□□□ -0.6
NPAS3-205ENST00000547068 PKN2Q16513 984 aaKnown RBP11.33□□□□□ -0.6
NPAS3-205ENST00000547068 BMT2Q1RMZ1 405 aa11.33□□□□□ -0.6
NPAS3-205ENST00000547068 MFSD14BQ5SR56 506 aa11.33□□□□□ -0.6
NPAS3-205ENST00000547068 MARK2Q7KZI7 788 aaKnown RBP11.33□□□□□ -0.6
NPAS3-205ENST00000547068 ST13P4Q8IZP2 240 aaPredicted RBP11.33□□□□□ -0.6
NPAS3-205ENST00000547068 ZNF513Q8N8E2 541 aaPredicted RBP11.33□□□□□ -0.6
NPAS3-205ENST00000547068 ANKFY1Q9P2R3 1169 aa11.33□□□□□ -0.6
NPAS3-205ENST00000547068 HEY2Q9UBP5 337 aa11.33□□□□□ -0.6
NPAS3-205ENST00000547068 A0A0G2JND7 137 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 RSPH10B2B2RC85 870 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 POC1B-GALNT4F8VUJ3 575 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 MEIS1O00470 390 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms