RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 PIK3R5Q8WYR1 880 aa15.65■□□□□ 0.1
DDX54-203ENST00000546869 ANKRD36BP1Q96IX9 119 aa15.65■□□□□ 0.1
DDX54-203ENST00000546869 FNBP1Q96RU3 617 aa15.65■□□□□ 0.1
DDX54-203ENST00000546869 CGRRF1Q99675 332 aa15.65■□□□□ 0.1
DDX54-203ENST00000546869 GZF1Q9H116 711 aaPredicted RBP15.65■□□□□ 0.1
DDX54-203ENST00000546869 TLE6Q9H808 572 aa15.65■□□□□ 0.1
DDX54-203ENST00000546869 COG5Q9UP83 839 aa15.65■□□□□ 0.1
DDX54-203ENST00000546869 NUB1Q9Y5A7 615 aa15.65■□□□□ 0.1
DDX54-203ENST00000546869 PRRC2BQ5JSZ5 2229 aaKnown RBP15.65■□□□□ 0.1
DDX54-203ENST00000546869 TRIP11Q15643 1979 aa15.64■□□□□ 0.09
DDX54-203ENST00000546869 BICDL2A1A5D9 508 aa15.64■□□□□ 0.09
DDX54-203ENST00000546869 BIN1O00499 593 aa15.64■□□□□ 0.09
DDX54-203ENST00000546869 CETN3O15182 167 aa15.64■□□□□ 0.09
DDX54-203ENST00000546869 AKAP3O75969 853 aa15.64■□□□□ 0.09
DDX54-203ENST00000546869 PTMSP20962 102 aa15.64■□□□□ 0.09
DDX54-203ENST00000546869 PNPLA4P41247 253 aa15.64■□□□□ 0.09
DDX54-203ENST00000546869 CASP4P49662 377 aa15.64■□□□□ 0.09
DDX54-203ENST00000546869 LILRA4P59901 499 aa15.64■□□□□ 0.09
DDX54-203ENST00000546869 TFAMQ00059 246 aaKnown RBP15.64■□□□□ 0.09
DDX54-203ENST00000546869 CCDC85BQ15834 202 aaPredicted RBP15.64■□□□□ 0.09
DDX54-203ENST00000546869 CT47A1Q5JQC4 288 aaPredicted RBP15.64■□□□□ 0.09
DDX54-203ENST00000546869 FAM171A1Q5VUB5 890 aa15.64■□□□□ 0.09
DDX54-203ENST00000546869 INTS8Q75QN2 995 aaKnown RBP15.64■□□□□ 0.09
DDX54-203ENST00000546869 ADGRD2Q7Z7M1 963 aa15.64■□□□□ 0.09
DDX54-203ENST00000546869 PPFIBP1Q86W92 1011 aa15.64■□□□□ 0.09
DDX54-203ENST00000546869 LRRC52Q8N7C0 313 aa15.64■□□□□ 0.09
DDX54-203ENST00000546869 C1orf127Q8N9H9 656 aa15.64■□□□□ 0.09
DDX54-203ENST00000546869 MLKLQ8NB16 471 aa15.64■□□□□ 0.09
DDX54-203ENST00000546869 LNX1Q8TBB1 728 aaPredicted RBP15.64■□□□□ 0.09
DDX54-203ENST00000546869 NOC3LQ8WTT2 800 aaKnown RBP15.64■□□□□ 0.09
DDX54-203ENST00000546869 PABPC5Q96DU9 382 aaKnown RBP15.64■□□□□ 0.09
DDX54-203ENST00000546869 EMILIN2Q9BXX0 1053 aa15.64■□□□□ 0.09
DDX54-203ENST00000546869 PCDHGC5Q9Y5F6 944 aa15.64■□□□□ 0.09
DDX54-203ENST00000546869 PDCD11Q14690 1871 aaKnown RBP15.63■□□□□ 0.09
DDX54-203ENST00000546869 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.63■□□□□ 0.09
DDX54-203ENST00000546869 ARHGEF37A1IGU5 675 aa15.63■□□□□ 0.09
DDX54-203ENST00000546869 SLC16A3O15427 465 aaKnown RBP15.63■□□□□ 0.09
DDX54-203ENST00000546869 TNNC2P02585 160 aa15.63■□□□□ 0.09
DDX54-203ENST00000546869 TMEM191BP0C7N4 346 aa15.63■□□□□ 0.09
DDX54-203ENST00000546869 TNNI1P19237 187 aa15.63■□□□□ 0.09
DDX54-203ENST00000546869 BRCC3P46736 316 aa15.63■□□□□ 0.09
DDX54-203ENST00000546869 NRIP1P48552 1158 aa15.63■□□□□ 0.09
DDX54-203ENST00000546869 GUCY2FP51841 1108 aa15.63■□□□□ 0.09
DDX54-203ENST00000546869 PMS1P54277 932 aaKnown RBP15.63■□□□□ 0.09
DDX54-203ENST00000546869 RBP5P82980 135 aa15.63■□□□□ 0.09
DDX54-203ENST00000546869 MRPL58Q14197 206 aaKnown RBP15.63■□□□□ 0.09
DDX54-203ENST00000546869 RTP2Q5QGT7 225 aa15.63■□□□□ 0.09
DDX54-203ENST00000546869 MICALL1Q8N3F8 863 aa15.63■□□□□ 0.09
DDX54-203ENST00000546869 APPL2Q8NEU8 664 aa15.63■□□□□ 0.09
DDX54-203ENST00000546869 HASPINQ8TF76 798 aa15.63■□□□□ 0.09
DDX54-203ENST00000546869 CCDC127Q96BQ5 260 aa15.63■□□□□ 0.09
DDX54-203ENST00000546869 BORCS6Q96GS4 357 aa15.63■□□□□ 0.09
DDX54-203ENST00000546869 KLHL5Q96PQ7 755 aa15.63■□□□□ 0.09
DDX54-203ENST00000546869 OXCT2Q9BYC2 517 aaPredicted RBP15.63■□□□□ 0.09
DDX54-203ENST00000546869 PCDHB8Q9UN66 801 aa15.63■□□□□ 0.09
DDX54-203ENST00000546869 BACE2Q9Y5Z0 518 aa15.63■□□□□ 0.09
DDX54-203ENST00000546869 CLASP2O75122 1294 aaKnown RBP15.62■□□□□ 0.09
DDX54-203ENST00000546869 CNPP09543 421 aaKnown RBP15.62■□□□□ 0.09
DDX54-203ENST00000546869 DLATP10515 647 aaKnown RBP15.62■□□□□ 0.09
DDX54-203ENST00000546869 TYMPP19971 482 aa15.62■□□□□ 0.09
DDX54-203ENST00000546869 TAF6P49848 677 aa15.62■□□□□ 0.09
DDX54-203ENST00000546869 CEP135Q66GS9 1140 aa15.62■□□□□ 0.09
DDX54-203ENST00000546869 TTI2Q6NXR4 508 aa15.62■□□□□ 0.09
DDX54-203ENST00000546869 ANKS3Q6ZW76 656 aa15.62■□□□□ 0.09
DDX54-203ENST00000546869 TRAPPC11Q7Z392 1133 aa15.62■□□□□ 0.09
DDX54-203ENST00000546869 FILIP1Q7Z7B0 1213 aa15.62■□□□□ 0.09
DDX54-203ENST00000546869 CSGALNACT2Q8N6G5 542 aa15.62■□□□□ 0.09
DDX54-203ENST00000546869 OR5B17Q8NGF7 314 aa15.62■□□□□ 0.09
DDX54-203ENST00000546869 PLEKHO2Q8TD55 490 aa15.62■□□□□ 0.09
DDX54-203ENST00000546869 NELFBQ8WX92 580 aa15.62■□□□□ 0.09
DDX54-203ENST00000546869 AUTS2Q8WXX7 1259 aa15.62■□□□□ 0.09
DDX54-203ENST00000546869 PPM1EQ8WY54 764 aa15.62■□□□□ 0.09
DDX54-203ENST00000546869 RIN2Q8WYP3 895 aaPredicted RBP15.62■□□□□ 0.09
DDX54-203ENST00000546869 ZNF516Q92618 1163 aa15.62■□□□□ 0.09
DDX54-203ENST00000546869 HLA-CQ95604 372 aa15.62■□□□□ 0.09
DDX54-203ENST00000546869 ZNF560Q96MR9 790 aa15.62■□□□□ 0.09
DDX54-203ENST00000546869 CEP63Q96MT8 703 aa15.62■□□□□ 0.09
DDX54-203ENST00000546869 POP1Q99575 1024 aaKnown RBP15.62■□□□□ 0.09
DDX54-203ENST00000546869 MTMR12Q9C0I1 747 aa15.62■□□□□ 0.09
DDX54-203ENST00000546869 SIX4Q9UIU6 781 aa15.62■□□□□ 0.09
DDX54-203ENST00000546869 PTPRJQ12913 1337 aa15.62■□□□□ 0.09
DDX54-203ENST00000546869 ANK1P16157 1881 aa15.61■□□□□ 0.09
DDX54-203ENST00000546869 LRRIQ3A6PVS8 624 aaPredicted RBP15.61■□□□□ 0.09
DDX54-203ENST00000546869 KPNA7A9QM74 516 aa15.61■□□□□ 0.09
DDX54-203ENST00000546869 H7C4K7 107 aa15.61■□□□□ 0.09
DDX54-203ENST00000546869 PPEF2O14830 753 aa15.61■□□□□ 0.09
DDX54-203ENST00000546869 SPTLC1O15269 473 aa15.61■□□□□ 0.09
DDX54-203ENST00000546869 TEX28O15482 410 aa15.61■□□□□ 0.09
DDX54-203ENST00000546869 TBC1D4O60343 1298 aa15.61■□□□□ 0.09
DDX54-203ENST00000546869 OAZ2O95190 189 aa15.61■□□□□ 0.09
DDX54-203ENST00000546869 STAU1O95793 577 aaKnown RBP15.61■□□□□ 0.09
DDX54-203ENST00000546869 ITGB3P05106 788 aa15.61■□□□□ 0.09
DDX54-203ENST00000546869 CYP11A1P05108 521 aa15.61■□□□□ 0.09
DDX54-203ENST00000546869 ADH1AP07327 375 aa15.61■□□□□ 0.09
DDX54-203ENST00000546869 TKTP29401 623 aaKnown RBP15.61■□□□□ 0.09
DDX54-203ENST00000546869 NDUFV1P49821 464 aa15.61■□□□□ 0.09
DDX54-203ENST00000546869 VAMP7P51809 220 aa15.61■□□□□ 0.09
DDX54-203ENST00000546869 NLRP12P59046 1061 aa15.61■□□□□ 0.09
DDX54-203ENST00000546869 PAK1Q13153 545 aa15.61■□□□□ 0.09
DDX54-203ENST00000546869 SV2CQ496J9 727 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms