RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 OR5B17Q8NGF7 314 aa14.86□□□□□ -0.03
PTCH1-213ENST00000546820 MTMR12Q9C0I1 747 aa14.86□□□□□ -0.03
PTCH1-213ENST00000546820 ENTPD7Q9NQZ7 604 aa14.86□□□□□ -0.03
PTCH1-213ENST00000546820 MARCH5Q9NX47 278 aa14.86□□□□□ -0.03
PTCH1-213ENST00000546820 CACNG4Q9UBN1 327 aa14.86□□□□□ -0.03
PTCH1-213ENST00000546820 AGAP1Q9UPQ3 857 aa14.86□□□□□ -0.03
PTCH1-213ENST00000546820 KIAA1671Q9BY89 1806 aa14.85□□□□□ -0.03
PTCH1-213ENST00000546820 LRRIQ3A6PVS8 624 aaPredicted RBP14.85□□□□□ -0.03
PTCH1-213ENST00000546820 ITGB3P05106 788 aa14.85□□□□□ -0.03
PTCH1-213ENST00000546820 TAF6P49848 677 aa14.85□□□□□ -0.03
PTCH1-213ENST00000546820 MCCD1P59942 119 aaPredicted RBP14.85□□□□□ -0.03
PTCH1-213ENST00000546820 ERVFC1P60507 584 aa14.85□□□□□ -0.03
PTCH1-213ENST00000546820 BIRC3Q13489 604 aa14.85□□□□□ -0.03
PTCH1-213ENST00000546820 SMC1AQ14683 1233 aaKnown RBP14.85□□□□□ -0.03
PTCH1-213ENST00000546820 SV2CQ496J9 727 aa14.85□□□□□ -0.03
PTCH1-213ENST00000546820 FAM171A1Q5VUB5 890 aa14.85□□□□□ -0.03
PTCH1-213ENST00000546820 TCERG1LQ5VWI1 586 aa14.85□□□□□ -0.03
PTCH1-213ENST00000546820 LMBRD2Q68DH5 695 aaPredicted RBP14.85□□□□□ -0.03
PTCH1-213ENST00000546820 PDXDC1Q6P996 788 aa14.85□□□□□ -0.03
PTCH1-213ENST00000546820 DSTYKQ6XUX3 929 aa14.85□□□□□ -0.03
PTCH1-213ENST00000546820 CEP57Q86XR8 500 aa14.85□□□□□ -0.03
PTCH1-213ENST00000546820 CREBRFQ8IUR6 639 aa14.85□□□□□ -0.03
PTCH1-213ENST00000546820 GPR65Q8IYL9 337 aa14.85□□□□□ -0.03
PTCH1-213ENST00000546820 LRRC52Q8N7C0 313 aa14.85□□□□□ -0.03
PTCH1-213ENST00000546820 APPL2Q8NEU8 664 aa14.85□□□□□ -0.03
PTCH1-213ENST00000546820 ENOX1Q8TC92 643 aaKnown RBP14.85□□□□□ -0.03
PTCH1-213ENST00000546820 HASPINQ8TF76 798 aa14.85□□□□□ -0.03
PTCH1-213ENST00000546820 BCL7CQ8WUZ0 217 aaPredicted RBP14.85□□□□□ -0.03
PTCH1-213ENST00000546820 ZNF516Q92618 1163 aa14.85□□□□□ -0.03
PTCH1-213ENST00000546820 BORCS6Q96GS4 357 aa14.85□□□□□ -0.03
PTCH1-213ENST00000546820 ZNF560Q96MR9 790 aa14.85□□□□□ -0.03
PTCH1-213ENST00000546820 TCF25Q9BQ70 676 aa14.85□□□□□ -0.03
PTCH1-213ENST00000546820 GPR62Q9BZJ7 368 aa14.85□□□□□ -0.03
PTCH1-213ENST00000546820 MRPL17Q9NRX2 175 aaKnown RBP14.85□□□□□ -0.03
PTCH1-213ENST00000546820 MAGEC2Q9UBF1 373 aaPredicted RBP14.85□□□□□ -0.03
PTCH1-213ENST00000546820 ANK1P16157 1881 aa14.84□□□□□ -0.03
PTCH1-213ENST00000546820 PDCD11Q14690 1871 aaKnown RBP14.84□□□□□ -0.03
PTCH1-213ENST00000546820 LAMA2P24043 3122 aaKnown RBP14.84□□□□□ -0.03
PTCH1-213ENST00000546820 SYCE3A1L190 88 aa14.84□□□□□ -0.03
PTCH1-213ENST00000546820 F8W810 466 aa14.84□□□□□ -0.03
PTCH1-213ENST00000546820 C4BPAP04003 597 aaKnown RBP14.84□□□□□ -0.03
PTCH1-213ENST00000546820 URODP06132 367 aa14.84□□□□□ -0.03
PTCH1-213ENST00000546820 CTSAP10619 480 aa14.84□□□□□ -0.03
PTCH1-213ENST00000546820 DNAJB1P25685 340 aa14.84□□□□□ -0.03
PTCH1-213ENST00000546820 POLR2BP30876 1174 aaKnown RBP14.84□□□□□ -0.03
PTCH1-213ENST00000546820 ATICP31939 592 aa14.84□□□□□ -0.03
PTCH1-213ENST00000546820 CA8P35219 290 aa14.84□□□□□ -0.03
PTCH1-213ENST00000546820 LILRA4P59901 499 aa14.84□□□□□ -0.03
PTCH1-213ENST00000546820 DLG4P78352 724 aa14.84□□□□□ -0.03
PTCH1-213ENST00000546820 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.84□□□□□ -0.03
PTCH1-213ENST00000546820 PLEKHO2Q8TD55 490 aa14.84□□□□□ -0.03
PTCH1-213ENST00000546820 MYLIPQ8WY64 445 aa14.84□□□□□ -0.03
PTCH1-213ENST00000546820 SUSD3Q96L08 255 aa14.84□□□□□ -0.03
PTCH1-213ENST00000546820 TTPALQ9BTX7 342 aa14.84□□□□□ -0.03
PTCH1-213ENST00000546820 HERC2P3Q9BVR0 1158 aa14.84□□□□□ -0.03
PTCH1-213ENST00000546820 THAP9Q9H5L6 903 aa14.84□□□□□ -0.03
PTCH1-213ENST00000546820 CHST7Q9NS84 486 aa14.84□□□□□ -0.03
PTCH1-213ENST00000546820 MTCH2Q9Y6C9 303 aa14.84□□□□□ -0.03
PTCH1-213ENST00000546820 SMTNL1A8MU46 457 aa14.83□□□□□ -0.04
PTCH1-213ENST00000546820 KPNA7A9QM74 516 aa14.83□□□□□ -0.04
PTCH1-213ENST00000546820 SYN3O14994 580 aa14.83□□□□□ -0.04
PTCH1-213ENST00000546820 CAVIN2O95810 425 aa14.83□□□□□ -0.04
PTCH1-213ENST00000546820 EFEMP2O95967 443 aa14.83□□□□□ -0.04
PTCH1-213ENST00000546820 FOSL2P15408 326 aa14.83□□□□□ -0.04
PTCH1-213ENST00000546820 BRCC3P46736 316 aa14.83□□□□□ -0.04
PTCH1-213ENST00000546820 GLUD2P49448 558 aa14.83□□□□□ -0.04
PTCH1-213ENST00000546820 MARSP56192 900 aaKnown RBP14.83□□□□□ -0.04
PTCH1-213ENST00000546820 CREMQ03060 361 aa14.83□□□□□ -0.04
PTCH1-213ENST00000546820 CETN1Q12798 172 aa14.83□□□□□ -0.04
PTCH1-213ENST00000546820 CAMK1Q14012 370 aa14.83□□□□□ -0.04
PTCH1-213ENST00000546820 ZSCAN23Q3MJ62 389 aa14.83□□□□□ -0.04
PTCH1-213ENST00000546820 ANO6Q4KMQ2 910 aa14.83□□□□□ -0.04
PTCH1-213ENST00000546820 TIGD5Q53EQ6 642 aa14.83□□□□□ -0.04
PTCH1-213ENST00000546820 DCAF17Q5H9S7 520 aaPredicted RBP14.83□□□□□ -0.04
PTCH1-213ENST00000546820 KRT39Q6A163 491 aa14.83□□□□□ -0.04
PTCH1-213ENST00000546820 CD300LGQ6UXG3 332 aa14.83□□□□□ -0.04
PTCH1-213ENST00000546820 SV2AQ7L0J3 742 aa14.83□□□□□ -0.04
PTCH1-213ENST00000546820 TAS1R1Q7RTX1 841 aa14.83□□□□□ -0.04
PTCH1-213ENST00000546820 MRPL43Q8N983 215 aaKnown RBP14.83□□□□□ -0.04
PTCH1-213ENST00000546820 CCDC150Q8NCX0 1101 aa14.83□□□□□ -0.04
PTCH1-213ENST00000546820 C3orf58Q8NDZ4 430 aa14.83□□□□□ -0.04
PTCH1-213ENST00000546820 HPDLQ96IR7 371 aa14.83□□□□□ -0.04
PTCH1-213ENST00000546820 GUCD1Q96NT3 240 aa14.83□□□□□ -0.04
PTCH1-213ENST00000546820 MED15Q96RN5 788 aa14.83□□□□□ -0.04
PTCH1-213ENST00000546820 EMILIN2Q9BXX0 1053 aa14.83□□□□□ -0.04
PTCH1-213ENST00000546820 GZF1Q9H116 711 aaPredicted RBP14.83□□□□□ -0.04
PTCH1-213ENST00000546820 ZBP1Q9H171 429 aa14.83□□□□□ -0.04
PTCH1-213ENST00000546820 DNAJC25Q9H1X3 360 aa14.83□□□□□ -0.04
PTCH1-213ENST00000546820 TMEM8AQ9HCN3 771 aa14.83□□□□□ -0.04
PTCH1-213ENST00000546820 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.83□□□□□ -0.04
PTCH1-213ENST00000546820 DSEQ9UL01 958 aa14.83□□□□□ -0.04
PTCH1-213ENST00000546820 IRAK3Q9Y616 596 aa14.83□□□□□ -0.04
PTCH1-213ENST00000546820 PTPRJQ12913 1337 aa14.83□□□□□ -0.04
PTCH1-213ENST00000546820 FSD2A1L4K1 749 aa14.82□□□□□ -0.04
PTCH1-213ENST00000546820 H7C4K7 107 aa14.82□□□□□ -0.04
PTCH1-213ENST00000546820 CYB561D2O14569 222 aa14.82□□□□□ -0.04
PTCH1-213ENST00000546820 FSCN2O14926 492 aa14.82□□□□□ -0.04
PTCH1-213ENST00000546820 CST3P01034 146 aaPredicted RBP14.82□□□□□ -0.04
PTCH1-213ENST00000546820 TRIM49P0CI25 452 aa14.82□□□□□ -0.04
PTCH1-213ENST00000546820 TRIM49CP0CI26 452 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms