RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 CLEC16AQ2KHT3 1053 aa15.06■□□□□ 0
SRP54-202ENST00000546080 P3H1Q32P28 736 aa15.06■□□□□ 0
SRP54-202ENST00000546080 DAW1Q8N136 415 aa15.06■□□□□ 0
SRP54-202ENST00000546080 DDX27Q96GQ7 796 aaKnown RBP15.06■□□□□ 0
SRP54-202ENST00000546080 NPHS2Q9NP85 383 aa15.06■□□□□ 0
SRP54-202ENST00000546080 SAR1AQ9NR31 198 aa15.06■□□□□ 0
SRP54-202ENST00000546080 FAM196BA6NMK8 535 aa15.05■□□□□ 0
SRP54-202ENST00000546080 F5H6K3 240 aa15.05■□□□□ 0
SRP54-202ENST00000546080 MAP3K13O43283 966 aa15.05■□□□□ 0
SRP54-202ENST00000546080 MYBL1P10243 752 aa15.05■□□□□ 0
SRP54-202ENST00000546080 BMP3P12645 472 aa15.05■□□□□ 0
SRP54-202ENST00000546080 RFC5P40937 340 aa15.05■□□□□ 0
SRP54-202ENST00000546080 KLF1Q13351 362 aaPredicted RBP15.05■□□□□ 0
SRP54-202ENST00000546080 ALCAMQ13740 583 aa15.05■□□□□ 0
SRP54-202ENST00000546080 SLC1A5Q15758 541 aa15.05■□□□□ 0
SRP54-202ENST00000546080 CERKLQ49MI3 558 aaPredicted RBP15.05■□□□□ 0
SRP54-202ENST00000546080 PCNX4Q63HM2 1172 aa15.05■□□□□ 0
SRP54-202ENST00000546080 C4orf50Q6ZRC1 276 aa15.05■□□□□ 0
SRP54-202ENST00000546080 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.05■□□□□ 0
SRP54-202ENST00000546080 OTOAQ7RTW8 1153 aa15.05■□□□□ 0
SRP54-202ENST00000546080 C12orf56Q8IXR9 622 aa15.05■□□□□ 0
SRP54-202ENST00000546080 ZSWIM2Q8NEG5 633 aa15.05■□□□□ 0
SRP54-202ENST00000546080 CFAP61Q8NHU2 1237 aa15.05■□□□□ 0
SRP54-202ENST00000546080 RNF217Q8TC41 542 aa15.05■□□□□ 0
SRP54-202ENST00000546080 LXNQ9BS40 222 aa15.05■□□□□ 0
SRP54-202ENST00000546080 LARSQ9P2J5 1176 aaKnown RBP15.05■□□□□ 0
SRP54-202ENST00000546080 LRCH1Q9Y2L9 728 aa15.05■□□□□ 0
SRP54-202ENST00000546080 C2CD2Q9Y426 696 aa15.05■□□□□ 0
SRP54-202ENST00000546080 PMM2O15305 246 aa15.05■□□□□ -0
SRP54-202ENST00000546080 ECE2O60344 883 aa15.05■□□□□ -0
SRP54-202ENST00000546080 TROVE2P10155 538 aaKnown RBP eCLIP15.05■□□□□ -0
SRP54-202ENST00000546080 SKIP12755 728 aa15.05■□□□□ -0
SRP54-202ENST00000546080 PLS3P13797 630 aa15.05■□□□□ -0
SRP54-202ENST00000546080 RXRBP28702 533 aa15.05■□□□□ -0
SRP54-202ENST00000546080 ZRSR2Q15696 482 aaKnown RBP15.05■□□□□ -0
SRP54-202ENST00000546080 KHDC1Q4VXA5 237 aaKnown RBP15.05■□□□□ -0
SRP54-202ENST00000546080 CDC42EP5Q6NZY7 148 aa15.05■□□□□ -0
SRP54-202ENST00000546080 RFWD3Q6PCD5 774 aa15.05■□□□□ -0
SRP54-202ENST00000546080 CLNKQ7Z7G1 428 aa15.05■□□□□ -0
SRP54-202ENST00000546080 MTDHQ86UE4 582 aaKnown RBP15.05■□□□□ -0
SRP54-202ENST00000546080 GALNT15Q8N3T1 639 aa15.05■□□□□ -0
SRP54-202ENST00000546080 DDX1Q92499 740 aaKnown RBP15.05■□□□□ -0
SRP54-202ENST00000546080 ZNF75CPQ92670 426 aaPredicted RBP15.05■□□□□ -0
SRP54-202ENST00000546080 SEMA4DQ92854 862 aa15.05■□□□□ -0
SRP54-202ENST00000546080 FAM136AQ96C01 138 aa15.05■□□□□ -0
SRP54-202ENST00000546080 FAM81BQ96LP2 452 aa15.05■□□□□ -0
SRP54-202ENST00000546080 UNC45AQ9H3U1 944 aa15.05■□□□□ -0
SRP54-202ENST00000546080 CYLDQ9NQC7 956 aa15.05■□□□□ -0
SRP54-202ENST00000546080 SCOCQ9UIL1 159 aa15.05■□□□□ -0
SRP54-202ENST00000546080 MYH11P35749 1972 aa15.04■□□□□ -0
SRP54-202ENST00000546080 PIK3CDO00329 1044 aa15.04■□□□□ -0
SRP54-202ENST00000546080 KLRC2P26717 231 aa15.04■□□□□ -0
SRP54-202ENST00000546080 GCLCP48506 637 aaPredicted RBP15.04■□□□□ -0
SRP54-202ENST00000546080 SCNN1DP51172 638 aa15.04■□□□□ -0
SRP54-202ENST00000546080 RCN2Q14257 317 aa15.04■□□□□ -0
SRP54-202ENST00000546080 RCN1Q15293 331 aa15.04■□□□□ -0
SRP54-202ENST00000546080 LVRNQ6Q4G3 990 aa15.04■□□□□ -0
SRP54-202ENST00000546080 ZNF398Q8TD17 642 aa15.04■□□□□ -0
SRP54-202ENST00000546080 UCMAQ8WVF2 138 aa15.04■□□□□ -0
SRP54-202ENST00000546080 MIPEPQ99797 713 aa15.04■□□□□ -0
SRP54-202ENST00000546080 WDR11Q9BZH6 1224 aa15.04■□□□□ -0
SRP54-202ENST00000546080 VPS37BQ9H9H4 285 aa15.04■□□□□ -0
SRP54-202ENST00000546080 PIDD1Q9HB75 910 aa15.04■□□□□ -0
SRP54-202ENST00000546080 SUGT1Q9Y2Z0 365 aa15.04■□□□□ -0
SRP54-202ENST00000546080 RBBP6Q7Z6E9 1792 aaKnown RBP15.04■□□□□ -0
SRP54-202ENST00000546080 GOLGA8IPA6NC78 632 aa15.04■□□□□ -0
SRP54-202ENST00000546080 GOLGA8JA6NMD2 632 aa15.04■□□□□ -0
SRP54-202ENST00000546080 CCDC22O60826 627 aa15.04■□□□□ -0
SRP54-202ENST00000546080 SNX30Q5VWJ9 437 aa15.04■□□□□ -0
SRP54-202ENST00000546080 PADI6Q6TGC4 694 aa15.04■□□□□ -0
SRP54-202ENST00000546080 CAPN12Q6ZSI9 719 aa15.04■□□□□ -0
SRP54-202ENST00000546080 PHLDB2Q86SQ0 1253 aa15.04■□□□□ -0
SRP54-202ENST00000546080 AMIGO3Q86WK7 504 aa15.04■□□□□ -0
SRP54-202ENST00000546080 HELQQ8TDG4 1101 aa15.04■□□□□ -0
SRP54-202ENST00000546080 ZFAND2BQ8WV99 257 aa15.04■□□□□ -0
SRP54-202ENST00000546080 MRRFQ96E11 262 aaKnown RBP15.04■□□□□ -0
SRP54-202ENST00000546080 NT5C1BQ96P26 610 aa15.04■□□□□ -0
SRP54-202ENST00000546080 ZNF577Q9BSK1 485 aa15.04■□□□□ -0
SRP54-202ENST00000546080 AVENQ9NQS1 362 aaPredicted RBP15.04■□□□□ -0
SRP54-202ENST00000546080 DNALI1O14645 258 aaPredicted RBP15.03■□□□□ -0
SRP54-202ENST00000546080 ZWINTO95229 277 aa15.03■□□□□ -0
SRP54-202ENST00000546080 NDUFB10O96000 172 aa15.03■□□□□ -0
SRP54-202ENST00000546080 CFBP00751 764 aa15.03■□□□□ -0
SRP54-202ENST00000546080 ADRB2P07550 413 aa15.03■□□□□ -0
SRP54-202ENST00000546080 MAPTP10636 758 aaKnown RBP15.03■□□□□ -0
SRP54-202ENST00000546080 KRT5P13647 590 aa15.03■□□□□ -0
SRP54-202ENST00000546080 ADSSP30520 456 aa15.03■□□□□ -0
SRP54-202ENST00000546080 UBXN2AP68543 259 aa15.03■□□□□ -0
SRP54-202ENST00000546080 NFIAQ12857 509 aa15.03■□□□□ -0
SRP54-202ENST00000546080 SEPT7Q16181 437 aaKnown RBP15.03■□□□□ -0
SRP54-202ENST00000546080 CTC1Q2NKJ3 1217 aa15.03■□□□□ -0
SRP54-202ENST00000546080 RNF220Q5VTB9 566 aa15.03■□□□□ -0
SRP54-202ENST00000546080 KRT39Q6A163 491 aa15.03■□□□□ -0
SRP54-202ENST00000546080 ANKS1BQ7Z6G8 1248 aa15.03■□□□□ -0
SRP54-202ENST00000546080 MCOLN2Q8IZK6 566 aa15.03■□□□□ -0
SRP54-202ENST00000546080 LARGE2Q8N3Y3 721 aa15.03■□□□□ -0
SRP54-202ENST00000546080 TMEM174Q8WUU8 243 aa15.03■□□□□ -0
SRP54-202ENST00000546080 DHX38Q92620 1227 aaKnown RBP15.03■□□□□ -0
SRP54-202ENST00000546080 RBM17Q96I25 401 aaKnown RBP15.03■□□□□ -0
SRP54-202ENST00000546080 BTBD10Q9BSF8 475 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms