RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 FBXO25Q8TCJ0 367 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 CHURC1Q8WUH1 139 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 KCNN1Q92952 543 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 TTC25Q96NG3 672 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 FIZ1Q96SL8 496 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 RUSC1Q9BVN2 902 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 TEKT3Q9BXF9 490 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 ZC3H12CQ9C0D7 883 aaKnown RBP6.91□□□□□ -1.3
SNHG1-225ENST00000545920 GPR88Q9GZN0 384 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 MAF1Q9H063 256 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 DPH5Q9H2P9 285 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 C17orf75Q9HAS0 396 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 RAB6BQ9NRW1 208 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 PGPEP1Q9NXJ5 209 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 NOP53Q9NZM5 478 aaKnown RBP6.91□□□□□ -1.3
SNHG1-225ENST00000545920 TPX2Q9ULW0 747 aaKnown RBP6.91□□□□□ -1.3
SNHG1-225ENST00000545920 JAG2Q9Y219 1238 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 ARL2BPQ9Y2Y0 163 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 COQ4Q9Y3A0 265 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.91□□□□□ -1.3
SNHG1-225ENST00000545920 USP3Q9Y6I4 520 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 RPTORQ8N122 1335 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 MYH10P35580 1976 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 CDK5RAP2Q96SN8 1893 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 ARHGEF35A5YM69 484 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 FAM86B1E9PN63 330 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 F5H6K3 240 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 H0YCG3 227 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 MPHOSPH10O00566 681 aaKnown RBP6.9□□□□□ -1.3
SNHG1-225ENST00000545920 ABLIM1O14639 778 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 SCAMP3O14828 347 aaKnown RBP6.9□□□□□ -1.3
SNHG1-225ENST00000545920 GPR182O15218 404 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 MAGEB2O15479 319 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 EXOC3O60645 756 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 GAS7O60861 476 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 CDH16O75309 829 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 SLITRK3O94933 977 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 ATP6V1G2O95670 118 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 FTLP02792 175 aaPredicted RBP6.9□□□□□ -1.3
SNHG1-225ENST00000545920 SERPINB2P05120 415 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 FAM86B2P0C5J1 330 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 EEF2P13639 858 aaKnown RBP6.9□□□□□ -1.3
SNHG1-225ENST00000545920 BRD2P25440 801 aaKnown RBP6.9□□□□□ -1.3
SNHG1-225ENST00000545920 ALDH1B1P30837 517 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 FLT3P36888 993 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 STAT3P40763 770 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 CASP4P49662 377 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 RASSF2P50749 326 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 GPC3P51654 580 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 VAMP7P51809 220 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 PSMC6P62333 389 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 LACTBP83111 547 aaPredicted RBP6.9□□□□□ -1.3
SNHG1-225ENST00000545920 GHRHRQ02643 423 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 RNASELQ05823 741 aaKnown RBP6.9□□□□□ -1.3
SNHG1-225ENST00000545920 STRN3Q13033 797 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 PRPF4BQ13523 1007 aaKnown RBP6.9□□□□□ -1.3
SNHG1-225ENST00000545920 AUHQ13825 339 aaKnown RBP6.9□□□□□ -1.3
SNHG1-225ENST00000545920 SLC29A2Q14542 456 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 TSNAXIP1Q2TAA8 658 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 CCDC38Q502W7 563 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 CEP55Q53EZ4 464 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 FAM26DQ5JW98 314 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 ODR4Q5SWX8 454 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 DCAF12L1Q5VU92 463 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 APOBEC3HQ6NTF7 200 aaKnown RBP6.9□□□□□ -1.3
SNHG1-225ENST00000545920 CDC42EP5Q6NZY7 148 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 RHBDF2Q6PJF5 856 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 TRIM72Q6ZMU5 477 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 TDRPQ86YL5 185 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 CCDC105Q8IYK2 499 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 SYCP3Q8IZU3 236 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 GJD3Q8N144 294 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 ANKRD35Q8N283 1001 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 CCDC89Q8N998 374 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 XXYLT1Q8NBI6 393 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 RDM1Q8NG50 284 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 OR2W6PQ8NHA6 318 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 ZNF398Q8TD17 642 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 FBF1Q8TES7 1133 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 C7orf43Q8WVR3 580 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 CKAP2Q8WWK9 683 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 SHC3Q92529 594 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 GJA10Q969M2 543 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 SNF8Q96H20 258 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 VCPIP1Q96JH7 1222 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 TRIM51Q9BSJ1 452 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 TUBB6Q9BUF5 446 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 CELF4Q9BZC1 486 aaKnown RBP6.9□□□□□ -1.3
SNHG1-225ENST00000545920 FHDC1Q9C0D6 1143 aaPredicted RBP6.9□□□□□ -1.3
SNHG1-225ENST00000545920 THAP2Q9H0W7 228 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 ADAM7Q9H2U9 754 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 RXFP1Q9HBX9 757 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 ARHGEF10LQ9HCE6 1279 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 SSU72Q9NP77 194 aaKnown RBP6.9□□□□□ -1.3
SNHG1-225ENST00000545920 OSGEPQ9NPF4 335 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 DDX4Q9NQI0 724 aaKnown RBP6.9□□□□□ -1.3
SNHG1-225ENST00000545920 TXLNGQ9NUQ3 528 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 NKIRAS1Q9NYS0 192 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 FETUBQ9UGM5 382 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 POLLQ9UGP5 575 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms