RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 CHN1P15882 459 aa24.77■■□□□ 1.56
FOXA1-202ENST00000545425 AP3M2P53677 418 aa24.77■■□□□ 1.56
FOXA1-202ENST00000545425 LMNB2Q03252 620 aa24.77■■□□□ 1.56
FOXA1-202ENST00000545425 BAATQ14032 418 aaPredicted RBP24.77■■□□□ 1.56
FOXA1-202ENST00000545425 RASAL3Q86YV0 1011 aa24.77■■□□□ 1.56
FOXA1-202ENST00000545425 ATXN2LQ8WWM7 1075 aaKnown RBP24.77■■□□□ 1.56
FOXA1-202ENST00000545425 AZI2Q9H6S1 392 aa24.77■■□□□ 1.56
FOXA1-202ENST00000545425 INTS9Q9NV88 658 aaKnown RBP24.77■■□□□ 1.56
FOXA1-202ENST00000545425 SLC9A2Q9UBY0 812 aa24.77■■□□□ 1.56
FOXA1-202ENST00000545425 MYPNQ86TC9 1320 aa24.76■■□□□ 1.55
FOXA1-202ENST00000545425 DCDC2CA8MYV0 355 aa24.76■■□□□ 1.55
FOXA1-202ENST00000545425 SORBS3O60504 671 aa24.76■■□□□ 1.55
FOXA1-202ENST00000545425 GSTA1P08263 222 aa24.76■■□□□ 1.55
FOXA1-202ENST00000545425 LIG4P49917 911 aa24.76■■□□□ 1.55
FOXA1-202ENST00000545425 KRT17Q04695 432 aa24.76■■□□□ 1.55
FOXA1-202ENST00000545425 TRAIPQ9BWF2 469 aa24.76■■□□□ 1.55
FOXA1-202ENST00000545425 CNTN6Q9UQ52 1028 aa24.76■■□□□ 1.55
FOXA1-202ENST00000545425 TMEM150BA6NC51 233 aa24.75■■□□□ 1.55
FOXA1-202ENST00000545425 ZNF862O60290 1169 aa24.75■■□□□ 1.55
FOXA1-202ENST00000545425 HNRNPH1P31943 449 aaKnown RBP24.75■■□□□ 1.55
FOXA1-202ENST00000545425 BACE1P56817 501 aa24.75■■□□□ 1.55
FOXA1-202ENST00000545425 CCNG2Q16589 344 aa24.75■■□□□ 1.55
FOXA1-202ENST00000545425 PHF13Q86YI8 300 aaPredicted RBP24.75■■□□□ 1.55
FOXA1-202ENST00000545425 RHOT1Q8IXI2 618 aa24.75■■□□□ 1.55
FOXA1-202ENST00000545425 KAT2BQ92831 832 aa24.75■■□□□ 1.55
FOXA1-202ENST00000545425 ZIC5Q96T25 663 aa24.75■■□□□ 1.55
FOXA1-202ENST00000545425 PPME1Q9Y570 386 aa24.75■■□□□ 1.55
FOXA1-202ENST00000545425 ZNFX1Q9P2E3 1918 aaKnown RBP24.75■■□□□ 1.55
FOXA1-202ENST00000545425 C19orf81C9J6K1 198 aa24.75■■□□□ 1.55
FOXA1-202ENST00000545425 CLDN3O15551 220 aa24.75■■□□□ 1.55
FOXA1-202ENST00000545425 DLATP10515 647 aaKnown RBP24.75■■□□□ 1.55
FOXA1-202ENST00000545425 IREB2P48200 963 aaKnown RBP24.75■■□□□ 1.55
FOXA1-202ENST00000545425 C1QBPQ07021 282 aaKnown RBP24.75■■□□□ 1.55
FOXA1-202ENST00000545425 MTMR2Q13614 643 aa24.75■■□□□ 1.55
FOXA1-202ENST00000545425 AUHQ13825 339 aaKnown RBP24.75■■□□□ 1.55
FOXA1-202ENST00000545425 ABHD15Q6UXT9 468 aa24.75■■□□□ 1.55
FOXA1-202ENST00000545425 CCDC13Q8IYE1 715 aa24.75■■□□□ 1.55
FOXA1-202ENST00000545425 KATNAL2Q8IYT4 538 aa24.75■■□□□ 1.55
FOXA1-202ENST00000545425 CCDC89Q8N998 374 aa24.75■■□□□ 1.55
FOXA1-202ENST00000545425 REPS2Q8NFH8 660 aa24.75■■□□□ 1.55
FOXA1-202ENST00000545425 SELENOSQ9BQE4 189 aa24.75■■□□□ 1.55
FOXA1-202ENST00000545425 FAM213AQ9BRX8 229 aa24.75■■□□□ 1.55
FOXA1-202ENST00000545425 DCLK3Q9C098 648 aa24.75■■□□□ 1.55
FOXA1-202ENST00000545425 ADAM7Q9H2U9 754 aa24.75■■□□□ 1.55
FOXA1-202ENST00000545425 SPATA31C2B4DYI2 1134 aa24.74■■□□□ 1.55
FOXA1-202ENST00000545425 THAP12O43422 761 aa24.74■■□□□ 1.55
FOXA1-202ENST00000545425 C4BPAP04003 597 aaKnown RBP24.74■■□□□ 1.55
FOXA1-202ENST00000545425 NAMPTP43490 491 aa24.74■■□□□ 1.55
FOXA1-202ENST00000545425 COL13A1Q5TAT6 717 aaPredicted RBP24.74■■□□□ 1.55
FOXA1-202ENST00000545425 MON1BQ7L1V2 547 aa24.74■■□□□ 1.55
FOXA1-202ENST00000545425 PIGWQ7Z7B1 504 aa24.74■■□□□ 1.55
FOXA1-202ENST00000545425 SCYL3Q8IZE3 742 aa24.74■■□□□ 1.55
FOXA1-202ENST00000545425 POP1Q99575 1024 aaKnown RBP24.74■■□□□ 1.55
FOXA1-202ENST00000545425 PLCD4Q9BRC7 762 aa24.74■■□□□ 1.55
FOXA1-202ENST00000545425 POLR3FQ9H1D9 316 aaPredicted RBP24.74■■□□□ 1.55
FOXA1-202ENST00000545425 A1CFQ9NQ94 594 aaKnown RBP24.74■■□□□ 1.55
FOXA1-202ENST00000545425 XPNPEP1Q9NQW7 623 aa24.74■■□□□ 1.55
FOXA1-202ENST00000545425 SAMD15Q9P1V8 674 aa24.74■■□□□ 1.55
FOXA1-202ENST00000545425 ASIC3Q9UHC3 531 aa24.74■■□□□ 1.55
FOXA1-202ENST00000545425 SIP14410 1827 aa24.74■■□□□ 1.55
FOXA1-202ENST00000545425 MROH7Q68CQ1 1323 aa24.73■■□□□ 1.55
FOXA1-202ENST00000545425 TLDC2A0PJX2 215 aa24.73■■□□□ 1.55
FOXA1-202ENST00000545425 ATF2P15336 505 aa24.73■■□□□ 1.55
FOXA1-202ENST00000545425 PRKCEQ02156 737 aa24.73■■□□□ 1.55
FOXA1-202ENST00000545425 ANKRD20A8PQ5CZ79 823 aa24.73■■□□□ 1.55
FOXA1-202ENST00000545425 EXD1Q8NHP7 514 aa24.73■■□□□ 1.55
FOXA1-202ENST00000545425 DDX27Q96GQ7 796 aaKnown RBP24.73■■□□□ 1.55
FOXA1-202ENST00000545425 KIFC3Q9BVG8 833 aa24.73■■□□□ 1.55
FOXA1-202ENST00000545425 TOPORSQ9NS56 1045 aaPredicted RBP24.73■■□□□ 1.55
FOXA1-202ENST00000545425 SEPT9Q9UHD8 586 aaPredicted RBP24.73■■□□□ 1.55
FOXA1-202ENST00000545425 ZNF112Q9UJU3 913 aa24.73■■□□□ 1.55
FOXA1-202ENST00000545425 TCRBV7S2A1N4TA0A589 114 aa24.72■■□□□ 1.55
FOXA1-202ENST00000545425 HLA-DRAP01903 254 aa24.72■■□□□ 1.55
FOXA1-202ENST00000545425 SUPT20HL2P0C7V6 817 aa24.72■■□□□ 1.55
FOXA1-202ENST00000545425 HSPA8P11142 646 aaKnown RBP24.72■■□□□ 1.55
FOXA1-202ENST00000545425 DSG3P32926 999 aa24.72■■□□□ 1.55
FOXA1-202ENST00000545425 ICAM3P32942 547 aa24.72■■□□□ 1.55
FOXA1-202ENST00000545425 LBX1P52954 281 aa24.72■■□□□ 1.55
FOXA1-202ENST00000545425 QPCTQ16769 361 aa24.72■■□□□ 1.55
FOXA1-202ENST00000545425 SWSAP1Q6NVH7 229 aa24.72■■□□□ 1.55
FOXA1-202ENST00000545425 IPO4Q8TEX9 1081 aaKnown RBP24.72■■□□□ 1.55
FOXA1-202ENST00000545425 ATG4CQ96DT6 458 aa24.72■■□□□ 1.55
FOXA1-202ENST00000545425 BTBD6Q96KE9 485 aa24.72■■□□□ 1.55
FOXA1-202ENST00000545425 CCDC77Q9BR77 488 aa24.72■■□□□ 1.55
FOXA1-202ENST00000545425 AGO2Q9UKV8 859 aaKnown RBP24.72■■□□□ 1.55
FOXA1-202ENST00000545425 ACTL7BQ9Y614 415 aa24.72■■□□□ 1.55
FOXA1-202ENST00000545425 PHIPQ8WWQ0 1821 aa24.72■■□□□ 1.55
FOXA1-202ENST00000545425 ADGRA3Q8IWK6 1321 aa24.72■■□□□ 1.55
FOXA1-202ENST00000545425 DNAJC8O75937 253 aaPredicted RBP24.72■■□□□ 1.55
FOXA1-202ENST00000545425 TTC4O95801 387 aa24.72■■□□□ 1.55
FOXA1-202ENST00000545425 PIK3CAP42336 1068 aa24.72■■□□□ 1.55
FOXA1-202ENST00000545425 ACTR2P61160 394 aa24.72■■□□□ 1.55
FOXA1-202ENST00000545425 ABRAQ8N0Z2 381 aa24.72■■□□□ 1.55
FOXA1-202ENST00000545425 RIBC1Q8N443 379 aaPredicted RBP24.72■■□□□ 1.55
FOXA1-202ENST00000545425 CCT6BQ92526 530 aa24.72■■□□□ 1.55
FOXA1-202ENST00000545425 SLC10A4Q96EP9 437 aa24.72■■□□□ 1.55
FOXA1-202ENST00000545425 CCDC114Q96M63 670 aa24.72■■□□□ 1.55
FOXA1-202ENST00000545425 CDC42EP4Q9H3Q1 356 aaKnown RBP24.72■■□□□ 1.55
FOXA1-202ENST00000545425 TMEM134Q9H6X4 195 aa24.72■■□□□ 1.55
FOXA1-202ENST00000545425 PTPN22Q9Y2R2 807 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms