RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 LRRC52Q8N7C0 313 aa14.01□□□□□ -0.17
CDCA3-210ENST00000545368 COLGALT1Q8NBJ5 622 aa14.01□□□□□ -0.17
CDCA3-210ENST00000545368 FBXL13Q8NEE6 735 aa14.01□□□□□ -0.17
CDCA3-210ENST00000545368 COLEC11Q9BWP8 271 aa14.01□□□□□ -0.17
CDCA3-210ENST00000545368 PBX4Q9BYU1 374 aa14.01□□□□□ -0.17
CDCA3-210ENST00000545368 PRG3Q9Y2Y8 225 aaPredicted RBP14.01□□□□□ -0.17
CDCA3-210ENST00000545368 NUB1Q9Y5A7 615 aa14.01□□□□□ -0.17
CDCA3-210ENST00000545368 PCDHB12Q9Y5F1 795 aa14.01□□□□□ -0.17
CDCA3-210ENST00000545368 ANO9A1A5B4 782 aa14□□□□□ -0.17
CDCA3-210ENST00000545368 LINC01553A4QN01 128 aa14□□□□□ -0.17
CDCA3-210ENST00000545368 LRRC10BA6NIK2 292 aa14□□□□□ -0.17
CDCA3-210ENST00000545368 LGALS16A8MUM7 142 aa14□□□□□ -0.17
CDCA3-210ENST00000545368 TMEM189-UBE2V1I3L0A0 370 aa14□□□□□ -0.17
CDCA3-210ENST00000545368 NRP1O14786 923 aa14□□□□□ -0.17
CDCA3-210ENST00000545368 B4GALT3O60512 393 aa14□□□□□ -0.17
CDCA3-210ENST00000545368 B3GAT3O94766 335 aa14□□□□□ -0.17
CDCA3-210ENST00000545368 HLA-DRAP01903 254 aa14□□□□□ -0.17
CDCA3-210ENST00000545368 GALTP07902 379 aa14□□□□□ -0.17
CDCA3-210ENST00000545368 MYOGP15173 224 aa14□□□□□ -0.17
CDCA3-210ENST00000545368 PAX3P23760 479 aa14□□□□□ -0.17
CDCA3-210ENST00000545368 ATICP31939 592 aa14□□□□□ -0.17
CDCA3-210ENST00000545368 TAF6P49848 677 aa14□□□□□ -0.17
CDCA3-210ENST00000545368 SMAD3P84022 425 aaKnown RBP14□□□□□ -0.17
CDCA3-210ENST00000545368 FANCCQ00597 558 aa14□□□□□ -0.17
CDCA3-210ENST00000545368 ZNF699Q32M78 642 aa14□□□□□ -0.17
CDCA3-210ENST00000545368 SV2CQ496J9 727 aa14□□□□□ -0.17
CDCA3-210ENST00000545368 DCLRE1AQ6PJP8 1040 aa14□□□□□ -0.17
CDCA3-210ENST00000545368 KCNT2Q6UVM3 1135 aa14□□□□□ -0.17
CDCA3-210ENST00000545368 CLP1Q92989 425 aaKnown RBP14□□□□□ -0.17
CDCA3-210ENST00000545368 SAMD11Q96NU1 681 aa14□□□□□ -0.17
CDCA3-210ENST00000545368 RAB20Q9NX57 234 aa14□□□□□ -0.17
CDCA3-210ENST00000545368 GCNT4Q9P109 453 aa14□□□□□ -0.17
CDCA3-210ENST00000545368 CACNG4Q9UBN1 327 aa14□□□□□ -0.17
CDCA3-210ENST00000545368 SIX4Q9UIU6 781 aa14□□□□□ -0.17
CDCA3-210ENST00000545368 COLQQ9Y215 455 aaPredicted RBP14□□□□□ -0.17
CDCA3-210ENST00000545368 GTPBP10A4D1E9 387 aaKnown RBP13.99□□□□□ -0.17
CDCA3-210ENST00000545368 PIRO00625 290 aa13.99□□□□□ -0.17
CDCA3-210ENST00000545368 CBFA2T2O43439 604 aa13.99□□□□□ -0.17
CDCA3-210ENST00000545368 TADA2AO75478 443 aa13.99□□□□□ -0.17
CDCA3-210ENST00000545368 KIF4AO95239 1232 aa13.99□□□□□ -0.17
CDCA3-210ENST00000545368 VNN1O95497 513 aa13.99□□□□□ -0.17
CDCA3-210ENST00000545368 TPM3P06753 285 aa13.99□□□□□ -0.17
CDCA3-210ENST00000545368 CTNNB1P35222 781 aa13.99□□□□□ -0.17
CDCA3-210ENST00000545368 PBX2P40425 430 aa13.99□□□□□ -0.17
CDCA3-210ENST00000545368 PBX3P40426 434 aa13.99□□□□□ -0.17
CDCA3-210ENST00000545368 MYL6P60660 151 aa13.99□□□□□ -0.17
CDCA3-210ENST00000545368 PLCB2Q00722 1185 aa13.99□□□□□ -0.17
CDCA3-210ENST00000545368 SGSM1Q2NKQ1 1148 aa13.99□□□□□ -0.17
CDCA3-210ENST00000545368 UVSSAQ2YD98 709 aa13.99□□□□□ -0.17
CDCA3-210ENST00000545368 EPC2Q52LR7 807 aa13.99□□□□□ -0.17
CDCA3-210ENST00000545368 WDR44Q5JSH3 913 aa13.99□□□□□ -0.17
CDCA3-210ENST00000545368 PPP2R2DQ66LE6 453 aa13.99□□□□□ -0.17
CDCA3-210ENST00000545368 GBP6Q6ZN66 633 aa13.99□□□□□ -0.17
CDCA3-210ENST00000545368 CXorf38Q8TB03 319 aa13.99□□□□□ -0.17
CDCA3-210ENST00000545368 TAS1R2Q8TE23 839 aa13.99□□□□□ -0.17
CDCA3-210ENST00000545368 HASPINQ8TF76 798 aa13.99□□□□□ -0.17
CDCA3-210ENST00000545368 RABGGTAQ92696 567 aa13.99□□□□□ -0.17
CDCA3-210ENST00000545368 TAF4BQ92750 862 aa13.99□□□□□ -0.17
CDCA3-210ENST00000545368 TMEM169Q96HH4 297 aa13.99□□□□□ -0.17
CDCA3-210ENST00000545368 HPDLQ96IR7 371 aa13.99□□□□□ -0.17
CDCA3-210ENST00000545368 PAAF1Q9BRP4 392 aa13.99□□□□□ -0.17
CDCA3-210ENST00000545368 SLC28A3Q9HAS3 691 aa13.99□□□□□ -0.17
CDCA3-210ENST00000545368 ADAM28Q9UKQ2 775 aa13.99□□□□□ -0.17
CDCA3-210ENST00000545368 YBX2Q9Y2T7 364 aaKnown RBP13.99□□□□□ -0.17
CDCA3-210ENST00000545368 COQ4Q9Y3A0 265 aa13.99□□□□□ -0.17
CDCA3-210ENST00000545368 SF3B1O75533 1304 aaKnown RBP eCLIP13.98□□□□□ -0.179e-6■■■■■ 68.9
CDCA3-210ENST00000545368 A0A1B0GTH6 734 aa13.98□□□□□ -0.17
CDCA3-210ENST00000545368 ARHGEF37A1IGU5 675 aa13.98□□□□□ -0.17
CDCA3-210ENST00000545368 NT5C1B-RDH14C9J2C7 533 aa13.98□□□□□ -0.17
CDCA3-210ENST00000545368 PPEF2O14830 753 aa13.98□□□□□ -0.17
CDCA3-210ENST00000545368 TRAPPC3O43617 180 aa13.98□□□□□ -0.17
CDCA3-210ENST00000545368 STAU1O95793 577 aaKnown RBP13.98□□□□□ -0.17
CDCA3-210ENST00000545368 CST3P01034 146 aaPredicted RBP13.98□□□□□ -0.17
CDCA3-210ENST00000545368 P4HA1P13674 534 aa13.98□□□□□ -0.17
CDCA3-210ENST00000545368 DNAJB2P25686 324 aa13.98□□□□□ -0.17
CDCA3-210ENST00000545368 UBASH3AP57075 661 aa13.98□□□□□ -0.17
CDCA3-210ENST00000545368 UBXN1Q04323 297 aa13.98□□□□□ -0.17
CDCA3-210ENST00000545368 EXOC3L4Q17RC7 722 aa13.98□□□□□ -0.17
CDCA3-210ENST00000545368 LRIT3Q3SXY7 679 aa13.98□□□□□ -0.17
CDCA3-210ENST00000545368 DSTYKQ6XUX3 929 aa13.98□□□□□ -0.17
CDCA3-210ENST00000545368 APTXQ7Z2E3 356 aaKnown RBP13.98□□□□□ -0.17
CDCA3-210ENST00000545368 SLC39A11Q8N1S5 342 aa13.98□□□□□ -0.17
CDCA3-210ENST00000545368 TMEM130Q8N3G9 435 aa13.98□□□□□ -0.17
CDCA3-210ENST00000545368 TGS1Q96RS0 853 aaKnown RBP13.98□□□□□ -0.17
CDCA3-210ENST00000545368 PLVAPQ9BX97 442 aa13.98□□□□□ -0.17
CDCA3-210ENST00000545368 NKX2-4Q9H2Z4 354 aa13.98□□□□□ -0.17
CDCA3-210ENST00000545368 SPG21Q9NZD8 308 aa13.98□□□□□ -0.17
CDCA3-210ENST00000545368 STK39Q9UEW8 545 aa13.98□□□□□ -0.17
CDCA3-210ENST00000545368 SCN1AP35498 2009 aa13.98□□□□□ -0.17
CDCA3-210ENST00000545368 KPNA7A9QM74 516 aa13.97□□□□□ -0.17
CDCA3-210ENST00000545368 LINC00271P0C7V0 271 aa13.97□□□□□ -0.17
CDCA3-210ENST00000545368 BMPR1AP36894 532 aa13.97□□□□□ -0.17
CDCA3-210ENST00000545368 LILRA4P59901 499 aa13.97□□□□□ -0.17
CDCA3-210ENST00000545368 TNNC1P63316 161 aa13.97□□□□□ -0.17
CDCA3-210ENST00000545368 NOP14P78316 857 aaKnown RBP13.97□□□□□ -0.17
CDCA3-210ENST00000545368 KRT17Q04695 432 aa13.97□□□□□ -0.17
CDCA3-210ENST00000545368 ELAVL2Q12926 359 aaKnown RBP13.97□□□□□ -0.17
CDCA3-210ENST00000545368 ZNF667Q5HYK9 610 aa13.97□□□□□ -0.17
CDCA3-210ENST00000545368 FUT10Q6P4F1 479 aa13.97□□□□□ -0.17
CDCA3-210ENST00000545368 C3orf58Q8NDZ4 430 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms