RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 BSNDQ8WZ55 320 aa7.69□□□□□ -1.18
LDHA-223ENST00000545215 SMG7Q92540 1137 aaKnown RBP7.69□□□□□ -1.18
LDHA-223ENST00000545215 TRIM55Q9BYV6 548 aa7.69□□□□□ -1.18
LDHA-223ENST00000545215 CRNKL1Q9BZJ0 848 aaKnown RBP7.69□□□□□ -1.18
LDHA-223ENST00000545215 CLEC4MQ9H2X3 399 aaPredicted RBP7.69□□□□□ -1.18
LDHA-223ENST00000545215 FZD8Q9H461 694 aa7.69□□□□□ -1.18
LDHA-223ENST00000545215 DNAJB12Q9NXW2 375 aaKnown RBP7.69□□□□□ -1.18
LDHA-223ENST00000545215 NYAP2Q9P242 653 aa7.69□□□□□ -1.18
LDHA-223ENST00000545215 PPT2Q9UMR5 302 aa7.69□□□□□ -1.18
LDHA-223ENST00000545215 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.69□□□□□ -1.18
LDHA-223ENST00000545215 MAN2B2Q9Y2E5 1009 aa7.69□□□□□ -1.18
LDHA-223ENST00000545215 DNHD1Q96M86 4753 aa7.69□□□□□ -1.18
LDHA-223ENST00000545215 PTPDC1A2A3K4 754 aa7.68□□□□□ -1.18
LDHA-223ENST00000545215 CLEC18AA5D8T8 446 aa7.68□□□□□ -1.18
LDHA-223ENST00000545215 GOLIM4O00461 696 aa7.68□□□□□ -1.18
LDHA-223ENST00000545215 NRG2O14511 850 aaPredicted RBP7.68□□□□□ -1.18
LDHA-223ENST00000545215 ST8SIA5O15466 376 aa7.68□□□□□ -1.18
LDHA-223ENST00000545215 B3GALT4O96024 378 aa7.68□□□□□ -1.18
LDHA-223ENST00000545215 GHRHP01286 108 aa7.68□□□□□ -1.18
LDHA-223ENST00000545215 CYP2D6P10635 497 aa7.68□□□□□ -1.18
LDHA-223ENST00000545215 PDE6AP16499 860 aa7.68□□□□□ -1.18
LDHA-223ENST00000545215 KLRC2P26717 231 aa7.68□□□□□ -1.18
LDHA-223ENST00000545215 CDK8P49336 464 aa7.68□□□□□ -1.18
LDHA-223ENST00000545215 POLGP54098 1239 aaPredicted RBP7.68□□□□□ -1.18
LDHA-223ENST00000545215 PDE1AP54750 535 aa7.68□□□□□ -1.18
LDHA-223ENST00000545215 CTBSQ01459 385 aa7.68□□□□□ -1.18
LDHA-223ENST00000545215 PPP2R3AQ06190 1150 aa7.68□□□□□ -1.18
LDHA-223ENST00000545215 SLC9C2Q5TAH2 1124 aa7.68□□□□□ -1.18
LDHA-223ENST00000545215 CLEC18BQ6UXF7 455 aa7.68□□□□□ -1.18
LDHA-223ENST00000545215 SEPT14Q6ZU15 432 aa7.68□□□□□ -1.18
LDHA-223ENST00000545215 PNPLA1Q8N8W4 532 aa7.68□□□□□ -1.18
LDHA-223ENST00000545215 CLEC18CQ8NCF0 446 aa7.68□□□□□ -1.18
LDHA-223ENST00000545215 PHKBQ93100 1093 aa7.68□□□□□ -1.18
LDHA-223ENST00000545215 ZNF707Q96C28 371 aaPredicted RBP7.68□□□□□ -1.18
LDHA-223ENST00000545215 MED8Q96G25 268 aa7.68□□□□□ -1.18
LDHA-223ENST00000545215 RIOK1Q9BRS2 568 aaKnown RBP7.68□□□□□ -1.18
LDHA-223ENST00000545215 MIR1-1HGQ9H1L0 117 aa7.68□□□□□ -1.18
LDHA-223ENST00000545215 MKNK2Q9HBH9 465 aa7.68□□□□□ -1.18
LDHA-223ENST00000545215 C2orf42Q9NWW7 574 aa7.68□□□□□ -1.18
LDHA-223ENST00000545215 PADI3Q9ULW8 664 aa7.68□□□□□ -1.18
LDHA-223ENST00000545215 SAMM50Q9Y512 469 aa7.68□□□□□ -1.18
LDHA-223ENST00000545215 PCNX1Q96RV3 2341 aa7.68□□□□□ -1.18
LDHA-223ENST00000545215 ATG2BQ96BY7 2078 aa7.67□□□□□ -1.18
LDHA-223ENST00000545215 MYH8P13535 1937 aa7.67□□□□□ -1.18
LDHA-223ENST00000545215 MUC22E2RYF6 1773 aaPredicted RBP7.67□□□□□ -1.18
LDHA-223ENST00000545215 LRRK2Q5S007 2527 aa7.67□□□□□ -1.18
LDHA-223ENST00000545215 PTPRBP23467 1997 aa7.67□□□□□ -1.18
LDHA-223ENST00000545215 PATE3B3GLJ2 98 aa7.67□□□□□ -1.18
LDHA-223ENST00000545215 TMEM232C9JQI7 657 aa7.67□□□□□ -1.18
LDHA-223ENST00000545215 SMAD7O15105 426 aaKnown RBP7.67□□□□□ -1.18
LDHA-223ENST00000545215 INPPL1O15357 1258 aa7.67□□□□□ -1.18
LDHA-223ENST00000545215 CILPO75339 1184 aa7.67□□□□□ -1.18
LDHA-223ENST00000545215 SMNDC1O75940 238 aaKnown RBP eCLIP7.67□□□□□ -1.18
LDHA-223ENST00000545215 RHOBTB1O94844 696 aa7.67□□□□□ -1.18
LDHA-223ENST00000545215 AFPP02771 609 aaKnown RBP7.67□□□□□ -1.18
LDHA-223ENST00000545215 FTH1P19P0C7X4 201 aa7.67□□□□□ -1.18
LDHA-223ENST00000545215 NME2P22392 152 aa7.67□□□□□ -1.18
LDHA-223ENST00000545215 HSD3B2P26439 372 aa7.67□□□□□ -1.18
LDHA-223ENST00000545215 LMAN2Q12907 356 aa7.67□□□□□ -1.18
LDHA-223ENST00000545215 MPP2Q14168 576 aa7.67□□□□□ -1.18
LDHA-223ENST00000545215 TRIP6Q15654 476 aaKnown RBP7.67□□□□□ -1.18
LDHA-223ENST00000545215 ZNF468Q5VIY5 522 aaPredicted RBP7.67□□□□□ -1.18
LDHA-223ENST00000545215 ZSCAN25Q6NSZ9 544 aa7.67□□□□□ -1.18
LDHA-223ENST00000545215 ADAMTSL4Q6UY14 1074 aa7.67□□□□□ -1.18
LDHA-223ENST00000545215 CCDC81Q6ZN84 652 aa7.67□□□□□ -1.18
LDHA-223ENST00000545215 FAM43BQ6ZT52 329 aaPredicted RBP7.67□□□□□ -1.18
LDHA-223ENST00000545215 TMPRSS7Q7RTY8 843 aa7.67□□□□□ -1.18
LDHA-223ENST00000545215 VN1R5Q7Z5H4 357 aa7.67□□□□□ -1.18
LDHA-223ENST00000545215 TMC8Q8IU68 726 aa7.67□□□□□ -1.18
LDHA-223ENST00000545215 FAM3CQ92520 227 aa7.67□□□□□ -1.18
LDHA-223ENST00000545215 PLD4Q96BZ4 506 aa7.67□□□□□ -1.18
LDHA-223ENST00000545215 SRPK1Q96SB4 655 aaKnown RBP7.67□□□□□ -1.18
LDHA-223ENST00000545215 PHF20Q9BVI0 1012 aa7.67□□□□□ -1.18
LDHA-223ENST00000545215 TMX1Q9H3N1 280 aa7.67□□□□□ -1.18
LDHA-223ENST00000545215 MAN1C1Q9NR34 630 aa7.67□□□□□ -1.18
LDHA-223ENST00000545215 SNTG2Q9NY99 539 aa7.67□□□□□ -1.18
LDHA-223ENST00000545215 CDH7Q9ULB5 785 aa7.67□□□□□ -1.18
LDHA-223ENST00000545215 SOX13Q9UN79 622 aa7.67□□□□□ -1.18
LDHA-223ENST00000545215 CYP8B1Q9UNU6 501 aa7.67□□□□□ -1.18
LDHA-223ENST00000545215 ZNF532Q9HCE3 1301 aa7.67□□□□□ -1.18
LDHA-223ENST00000545215 AHCTF1Q8WYP5 2266 aa7.66□□□□□ -1.18
LDHA-223ENST00000545215 MYO5AQ9Y4I1 1855 aaKnown RBP7.66□□□□□ -1.18
LDHA-223ENST00000545215 HIP1O00291 1037 aa7.66□□□□□ -1.18
LDHA-223ENST00000545215 NFIBO00712 420 aa7.66□□□□□ -1.18
LDHA-223ENST00000545215 RRP8O43159 456 aaKnown RBP7.66□□□□□ -1.18
LDHA-223ENST00000545215 B4GALT3O60512 393 aa7.66□□□□□ -1.18
LDHA-223ENST00000545215 RFPL2O75678 378 aa7.66□□□□□ -1.18
LDHA-223ENST00000545215 ZFYP08048 801 aaPredicted RBP7.66□□□□□ -1.18
LDHA-223ENST00000545215 FGFR1P11362 822 aa7.66□□□□□ -1.18
LDHA-223ENST00000545215 MYF5P13349 255 aa7.66□□□□□ -1.18
LDHA-223ENST00000545215 EIF2AK2P19525 551 aaKnown RBP7.66□□□□□ -1.18
LDHA-223ENST00000545215 IBSPP21815 317 aaPredicted RBP7.66□□□□□ -1.18
LDHA-223ENST00000545215 CALML3P27482 149 aa7.66□□□□□ -1.18
LDHA-223ENST00000545215 GIPRP48546 466 aa7.66□□□□□ -1.18
LDHA-223ENST00000545215 STAT2P52630 851 aa7.66□□□□□ -1.18
LDHA-223ENST00000545215 PCDH1Q08174 1060 aa7.66□□□□□ -1.18
LDHA-223ENST00000545215 ELF2Q15723 593 aa7.66□□□□□ -1.18
LDHA-223ENST00000545215 HSDL1Q3SXM5 330 aa7.66□□□□□ -1.18
LDHA-223ENST00000545215 GLIPR1L2Q4G1C9 344 aa7.66□□□□□ -1.18
LDHA-223ENST00000545215 CEP135Q66GS9 1140 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms