RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 ZNF700Q9H0M5 742 aa7.12□□□□□ -1.27
CPSF7-222ENST00000544585 AP5M1Q9H0R1 490 aa7.12□□□□□ -1.27
CPSF7-222ENST00000544585 DUSP15Q9H1R2 295 aaPredicted RBP7.12□□□□□ -1.27
CPSF7-222ENST00000544585 AP5S1Q9NUS5 200 aa7.12□□□□□ -1.27
CPSF7-222ENST00000544585 FBXO28Q9NVF7 368 aa7.12□□□□□ -1.27
CPSF7-222ENST00000544585 MKS1Q9NXB0 559 aa7.12□□□□□ -1.27
CPSF7-222ENST00000544585 LMCD1Q9NZU5 365 aa7.12□□□□□ -1.27
CPSF7-222ENST00000544585 H2AFY2Q9P0M6 372 aaPredicted RBP7.12□□□□□ -1.27
CPSF7-222ENST00000544585 TIMM13Q9Y5L4 95 aaPredicted RBP7.12□□□□□ -1.27
CPSF7-222ENST00000544585 PIEZO1Q92508 2521 aa7.12□□□□□ -1.27
CPSF7-222ENST00000544585 SIPA1L1O43166 1804 aa7.12□□□□□ -1.27
CPSF7-222ENST00000544585 ZNF236Q9UL36 1845 aa7.11□□□□□ -1.27
CPSF7-222ENST00000544585 ZNF532Q9HCE3 1301 aa7.11□□□□□ -1.27
CPSF7-222ENST00000544585 F5H6K3 240 aa7.11□□□□□ -1.27
CPSF7-222ENST00000544585 SMIM22K7EJ46 135 aa7.11□□□□□ -1.27
CPSF7-222ENST00000544585 FGF10O15520 208 aaPredicted RBP7.11□□□□□ -1.27
CPSF7-222ENST00000544585 KRT37O76014 449 aa7.11□□□□□ -1.27
CPSF7-222ENST00000544585 ARHGEF15O94989 841 aa7.11□□□□□ -1.27
CPSF7-222ENST00000544585 TRIM27P14373 513 aa7.11□□□□□ -1.27
CPSF7-222ENST00000544585 PDE6AP16499 860 aa7.11□□□□□ -1.27
CPSF7-222ENST00000544585 RABGGTBP53611 331 aa7.11□□□□□ -1.27
CPSF7-222ENST00000544585 OAZ1P54368 228 aa7.11□□□□□ -1.27
CPSF7-222ENST00000544585 RPL11P62913 178 aaKnown RBP7.11□□□□□ -1.27
CPSF7-222ENST00000544585 KLRC3Q07444 240 aa7.11□□□□□ -1.27
CPSF7-222ENST00000544585 ZNF174Q15697 407 aa7.11□□□□□ -1.27
CPSF7-222ENST00000544585 HSP90AB4PQ58FF6 505 aa7.11□□□□□ -1.27
CPSF7-222ENST00000544585 FAM83BQ5T0W9 1011 aa7.11□□□□□ -1.27
CPSF7-222ENST00000544585 ARMCX2Q7L311 632 aa7.11□□□□□ -1.27
CPSF7-222ENST00000544585 ALYREFQ86V81 257 aaKnown RBP7.11□□□□□ -1.27
CPSF7-222ENST00000544585 TSPYL5Q86VY4 417 aaPredicted RBP7.11□□□□□ -1.27
CPSF7-222ENST00000544585 CLEC10AQ8IUN9 316 aa7.11□□□□□ -1.27
CPSF7-222ENST00000544585 BEND7Q8N7W2 519 aaPredicted RBP7.11□□□□□ -1.27
CPSF7-222ENST00000544585 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.11□□□□□ -1.27
CPSF7-222ENST00000544585 SDR42E1Q8WUS8 393 aa7.11□□□□□ -1.27
CPSF7-222ENST00000544585 FRAT1Q92837 279 aaPredicted RBP7.11□□□□□ -1.27
CPSF7-222ENST00000544585 BOCQ9BWV1 1114 aa7.11□□□□□ -1.27
CPSF7-222ENST00000544585 FOXP3Q9BZS1 431 aa7.11□□□□□ -1.27
CPSF7-222ENST00000544585 NYAP2Q9P242 653 aa7.11□□□□□ -1.27
CPSF7-222ENST00000544585 RCAN3Q9UKA8 241 aa7.11□□□□□ -1.27
CPSF7-222ENST00000544585 CBLCQ9ULV8 474 aa7.11□□□□□ -1.27
CPSF7-222ENST00000544585 RIPK3Q9Y572 518 aa7.11□□□□□ -1.27
CPSF7-222ENST00000544585 TCF20Q9UGU0 1960 aaKnown RBP7.11□□□□□ -1.27
CPSF7-222ENST00000544585 MYH1P12882 1939 aa7.11□□□□□ -1.27
CPSF7-222ENST00000544585 SLC12A8A0AV02 714 aa7.1□□□□□ -1.27
CPSF7-222ENST00000544585 CTAGE5O15320 804 aa7.1□□□□□ -1.27
CPSF7-222ENST00000544585 LDHAP00338 332 aaKnown RBP7.1□□□□□ -1.27
CPSF7-222ENST00000544585 RBP3P10745 1247 aa7.1□□□□□ -1.27
CPSF7-222ENST00000544585 ALADP13716 330 aa7.1□□□□□ -1.27
CPSF7-222ENST00000544585 MYOGP15173 224 aa7.1□□□□□ -1.27
CPSF7-222ENST00000544585 RFC2P35250 354 aa7.1□□□□□ -1.27
CPSF7-222ENST00000544585 BEX3Q00994 111 aa7.1□□□□□ -1.27
CPSF7-222ENST00000544585 CDKAL1Q5VV42 579 aa7.1□□□□□ -1.27
CPSF7-222ENST00000544585 CXCL17Q6UXB2 119 aa7.1□□□□□ -1.27
CPSF7-222ENST00000544585 CYP2R1Q6VVX0 501 aa7.1□□□□□ -1.27
CPSF7-222ENST00000544585 RNF111Q6ZNA4 994 aa7.1□□□□□ -1.27
CPSF7-222ENST00000544585 TSHZ1Q6ZSZ6 1077 aa7.1□□□□□ -1.27
CPSF7-222ENST00000544585 AACSQ86V21 672 aa7.1□□□□□ -1.27
CPSF7-222ENST00000544585 CPXCR1Q8N123 301 aa7.1□□□□□ -1.27
CPSF7-222ENST00000544585 CLIP3Q96DZ5 547 aa7.1□□□□□ -1.27
CPSF7-222ENST00000544585 MEGF10Q96KG7 1140 aa7.1□□□□□ -1.27
CPSF7-222ENST00000544585 FAM83CQ9BQN1 747 aa7.1□□□□□ -1.27
CPSF7-222ENST00000544585 TRPV6Q9H1D0 765 aa7.1□□□□□ -1.27
CPSF7-222ENST00000544585 KCNH6Q9H252 994 aa7.1□□□□□ -1.27
CPSF7-222ENST00000544585 SLC38A10Q9HBR0 1119 aa7.1□□□□□ -1.27
CPSF7-222ENST00000544585 CHST12Q9NRB3 414 aa7.1□□□□□ -1.27
CPSF7-222ENST00000544585 CLDND1Q9NY35 253 aa7.1□□□□□ -1.27
CPSF7-222ENST00000544585 PPARGC1AQ9UBK2 798 aaKnown RBP7.1□□□□□ -1.27
CPSF7-222ENST00000544585 FEM1BQ9UK73 627 aa7.1□□□□□ -1.27
CPSF7-222ENST00000544585 PLXNA1Q9UIW2 1896 aa7.1□□□□□ -1.27
CPSF7-222ENST00000544585 CACNA1GO43497 2377 aa7.1□□□□□ -1.27
CPSF7-222ENST00000544585 EYSQ5T1H1 3165 aa7.1□□□□□ -1.27
CPSF7-222ENST00000544585 UMODL1Q5DID0 1318 aa7.09□□□□□ -1.27
CPSF7-222ENST00000544585 SPTBN5Q9NRC6 3674 aaKnown RBP7.09□□□□□ -1.27
CPSF7-222ENST00000544585 TCRBV5S4A2TA0A5A2 114 aa7.09□□□□□ -1.27
CPSF7-222ENST00000544585 RFXAPO00287 272 aa7.09□□□□□ -1.27
CPSF7-222ENST00000544585 ADCY6O43306 1168 aa7.09□□□□□ -1.27
CPSF7-222ENST00000544585 XPOTO43592 962 aaKnown RBP7.09□□□□□ -1.27
CPSF7-222ENST00000544585 B4GALT4O60513 344 aa7.09□□□□□ -1.27
CPSF7-222ENST00000544585 CA3P07451 260 aa7.09□□□□□ -1.27
CPSF7-222ENST00000544585 CYP2D6P10635 497 aa7.09□□□□□ -1.27
CPSF7-222ENST00000544585 KRT15P19012 456 aa7.09□□□□□ -1.27
CPSF7-222ENST00000544585 LSP1P33241 339 aa7.09□□□□□ -1.27
CPSF7-222ENST00000544585 BCL6P41182 706 aa7.09□□□□□ -1.27
CPSF7-222ENST00000544585 SCAND1P57086 179 aa7.09□□□□□ -1.27
CPSF7-222ENST00000544585 KRT85P78386 507 aa7.09□□□□□ -1.27
CPSF7-222ENST00000544585 PURAQ00577 322 aaKnown RBP7.09□□□□□ -1.27
CPSF7-222ENST00000544585 CYP27A1Q02318 531 aa7.09□□□□□ -1.27
CPSF7-222ENST00000544585 GTF2H3Q13889 308 aa7.09□□□□□ -1.27
CPSF7-222ENST00000544585 MBTPS1Q14703 1052 aa7.09□□□□□ -1.27
CPSF7-222ENST00000544585 FSCN1Q16658 493 aaKnown RBP7.09□□□□□ -1.27
CPSF7-222ENST00000544585 ZKSCAN2Q63HK3 967 aa7.09□□□□□ -1.27
CPSF7-222ENST00000544585 MBLAC2Q68D91 279 aa7.09□□□□□ -1.27
CPSF7-222ENST00000544585 EP400NLQ6ZTU2 488 aa7.09□□□□□ -1.27
CPSF7-222ENST00000544585 ZAR1Q86SH2 424 aa7.09□□□□□ -1.27
CPSF7-222ENST00000544585 RPAP2Q8IXW5 612 aaPredicted RBP7.09□□□□□ -1.27
CPSF7-222ENST00000544585 CLASRPQ8N2M8 674 aaKnown RBP7.09□□□□□ -1.27
CPSF7-222ENST00000544585 LCORLQ8N3X6 602 aa7.09□□□□□ -1.27
CPSF7-222ENST00000544585 TMEM57Q8N5G2 664 aa7.09□□□□□ -1.27
CPSF7-222ENST00000544585 SVIPQ8NHG7 77 aa7.09□□□□□ -1.27
CPSF7-222ENST00000544585 HSPBAP1Q96EW2 488 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms