RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 CLDN10P78369 228 aa20.7■□□□□ 0.9
DDX55-211ENST00000544429 EDRF1Q3B7T1 1238 aa20.7■□□□□ 0.9
DDX55-211ENST00000544429 LNX1Q8TBB1 728 aaPredicted RBP20.7■□□□□ 0.9
DDX55-211ENST00000544429 SLC22A17Q8WUG5 538 aa20.7■□□□□ 0.9
DDX55-211ENST00000544429 KLHL5Q96PQ7 755 aa20.7■□□□□ 0.9
DDX55-211ENST00000544429 CLSTN2Q9H4D0 955 aa20.7■□□□□ 0.9
DDX55-211ENST00000544429 INTS13Q9NVM9 706 aa20.7■□□□□ 0.9
DDX55-211ENST00000544429 KIAA1468Q9P260 1216 aa20.7■□□□□ 0.9
DDX55-211ENST00000544429 FNIP2Q9P278 1114 aa20.7■□□□□ 0.9
DDX55-211ENST00000544429 SYN3O14994 580 aa20.69■□□□□ 0.9
DDX55-211ENST00000544429 MAPK13O15264 365 aa20.69■□□□□ 0.9
DDX55-211ENST00000544429 CALUO43852 315 aaPredicted RBP20.69■□□□□ 0.9
DDX55-211ENST00000544429 EXOC3O60645 756 aa20.69■□□□□ 0.9
DDX55-211ENST00000544429 C1RP00736 705 aa20.69■□□□□ 0.9
DDX55-211ENST00000544429 CD44P16070 742 aaKnown RBP20.69■□□□□ 0.9
DDX55-211ENST00000544429 PAX3P23760 479 aa20.69■□□□□ 0.9
DDX55-211ENST00000544429 DLX2Q07687 328 aaPredicted RBP20.69■□□□□ 0.9
DDX55-211ENST00000544429 MRPL58Q14197 206 aaKnown RBP20.69■□□□□ 0.9
DDX55-211ENST00000544429 SKIV2LQ15477 1246 aaKnown RBP20.69■□□□□ 0.9
DDX55-211ENST00000544429 WDR49Q8IV35 697 aa20.69■□□□□ 0.9
DDX55-211ENST00000544429 ZC3H3Q8IXZ2 948 aaKnown RBP20.69■□□□□ 0.9
DDX55-211ENST00000544429 C1orf127Q8N9H9 656 aa20.69■□□□□ 0.9
DDX55-211ENST00000544429 RDH13Q8NBN7 331 aa20.69■□□□□ 0.9
DDX55-211ENST00000544429 GPT2Q8TD30 523 aa20.69■□□□□ 0.9
DDX55-211ENST00000544429 MSLNLQ96KJ4 702 aa20.69■□□□□ 0.9
DDX55-211ENST00000544429 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.69■□□□□ 0.9
DDX55-211ENST00000544429 CLEC1BQ9P126 229 aa20.69■□□□□ 0.9
DDX55-211ENST00000544429 THEGQ9P2T0 379 aa20.69■□□□□ 0.9
DDX55-211ENST00000544429 VCANP13611 3396 aa20.69■□□□□ 0.9
DDX55-211ENST00000544429 I3L4J1 428 aa20.68■□□□□ 0.9
DDX55-211ENST00000544429 SPTLC1O15269 473 aa20.68■□□□□ 0.9
DDX55-211ENST00000544429 TEX28O15482 410 aa20.68■□□□□ 0.9
DDX55-211ENST00000544429 TKTP29401 623 aaKnown RBP20.68■□□□□ 0.9
DDX55-211ENST00000544429 CASP4P49662 377 aa20.68■□□□□ 0.9
DDX55-211ENST00000544429 LILRA4P59901 499 aa20.68■□□□□ 0.9
DDX55-211ENST00000544429 RBM10P98175 930 aaKnown RBP20.68■□□□□ 0.9
DDX55-211ENST00000544429 CAMK4Q16566 473 aa20.68■□□□□ 0.9
DDX55-211ENST00000544429 SCARA3Q6AZY7 606 aa20.68■□□□□ 0.9
DDX55-211ENST00000544429 KIAA1841Q6NSI8 718 aa20.68■□□□□ 0.9
DDX55-211ENST00000544429 FOXR2Q6PJQ5 311 aa20.68■□□□□ 0.9
DDX55-211ENST00000544429 TRIML1Q8N9V2 468 aa20.68■□□□□ 0.9
DDX55-211ENST00000544429 OR5B17Q8NGF7 314 aa20.68■□□□□ 0.9
DDX55-211ENST00000544429 PLEKHO2Q8TD55 490 aa20.68■□□□□ 0.9
DDX55-211ENST00000544429 CACTINQ8WUQ7 758 aaKnown RBP20.68■□□□□ 0.9
DDX55-211ENST00000544429 ATXN2LQ8WWM7 1075 aaKnown RBP20.68■□□□□ 0.9
DDX55-211ENST00000544429 RIN2Q8WYP3 895 aaPredicted RBP20.68■□□□□ 0.9
DDX55-211ENST00000544429 BORCS6Q96GS4 357 aa20.68■□□□□ 0.9
DDX55-211ENST00000544429 FAM84AQ96KN4 292 aa20.68■□□□□ 0.9
DDX55-211ENST00000544429 EMILIN2Q9BXX0 1053 aa20.68■□□□□ 0.9
DDX55-211ENST00000544429 IGFLR1Q9H665 355 aa20.68■□□□□ 0.9
DDX55-211ENST00000544429 CLDND1Q9NY35 253 aa20.68■□□□□ 0.9
DDX55-211ENST00000544429 SIX4Q9UIU6 781 aa20.68■□□□□ 0.9
DDX55-211ENST00000544429 HCFC2Q9Y5Z7 792 aa20.68■□□□□ 0.9
DDX55-211ENST00000544429 PPP1R3GB7ZBB8 358 aa20.67■□□□□ 0.9
DDX55-211ENST00000544429 C2CD2LO14523 706 aa20.67■□□□□ 0.9
DDX55-211ENST00000544429 TBC1D4O60343 1298 aa20.67■□□□□ 0.9
DDX55-211ENST00000544429 NR2F2P24468 414 aa20.67■□□□□ 0.9
DDX55-211ENST00000544429 PPP1R2P41236 205 aa20.67■□□□□ 0.9
DDX55-211ENST00000544429 CLCN4P51793 760 aa20.67■□□□□ 0.9
DDX55-211ENST00000544429 PMS1P54277 932 aaKnown RBP20.67■□□□□ 0.9
DDX55-211ENST00000544429 TFAMQ00059 246 aaKnown RBP20.67■□□□□ 0.9
DDX55-211ENST00000544429 CREMQ03060 361 aa20.67■□□□□ 0.9
DDX55-211ENST00000544429 TFF2Q03403 129 aa20.67■□□□□ 0.9
DDX55-211ENST00000544429 PDXDC1Q6P996 788 aa20.67■□□□□ 0.9
DDX55-211ENST00000544429 PARD3BQ8TEW8 1205 aa20.67■□□□□ 0.9
DDX55-211ENST00000544429 NOC3LQ8WTT2 800 aaKnown RBP20.67■□□□□ 0.9
DDX55-211ENST00000544429 CGRRF1Q99675 332 aa20.67■□□□□ 0.9
DDX55-211ENST00000544429 CLSTN3Q9BQT9 956 aa20.67■□□□□ 0.9
DDX55-211ENST00000544429 MTMR12Q9C0I1 747 aa20.67■□□□□ 0.9
DDX55-211ENST00000544429 MTRRQ9UBK8 725 aa20.67■□□□□ 0.9
DDX55-211ENST00000544429 ITGA11Q9UKX5 1188 aa20.67■□□□□ 0.9
DDX55-211ENST00000544429 PCDHB8Q9UN66 801 aa20.67■□□□□ 0.9
DDX55-211ENST00000544429 NUB1Q9Y5A7 615 aa20.67■□□□□ 0.9
DDX55-211ENST00000544429 A0A0C4DFX4 3053 aa20.67■□□□□ 0.9
DDX55-211ENST00000544429 AKAP3O75969 853 aa20.66■□□□□ 0.9
DDX55-211ENST00000544429 MCM4P33991 863 aa20.66■□□□□ 0.9
DDX55-211ENST00000544429 ENPEPQ07075 957 aa20.66■□□□□ 0.9
DDX55-211ENST00000544429 LEXMQ3ZCV2 418 aa20.66■□□□□ 0.9
DDX55-211ENST00000544429 ISM2Q6H9L7 571 aa20.66■□□□□ 0.9
DDX55-211ENST00000544429 PRSS55Q6UWB4 352 aaPredicted RBP20.66■□□□□ 0.9
DDX55-211ENST00000544429 PPFIBP1Q86W92 1011 aa20.66■□□□□ 0.9
DDX55-211ENST00000544429 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.66■□□□□ 0.9
DDX55-211ENST00000544429 ZNF516Q92618 1163 aa20.66■□□□□ 0.9
DDX55-211ENST00000544429 DHTKD1Q96HY7 919 aaPredicted RBP20.66■□□□□ 0.9
DDX55-211ENST00000544429 BACE2Q9Y5Z0 518 aa20.66■□□□□ 0.9
DDX55-211ENST00000544429 GOLGA6L22H0YM25 854 aa20.65■□□□□ 0.9
DDX55-211ENST00000544429 PAPLNO95428 1278 aa20.65■□□□□ 0.9
DDX55-211ENST00000544429 ITGB3P05106 788 aa20.65■□□□□ 0.9
DDX55-211ENST00000544429 ADH1AP07327 375 aa20.65■□□□□ 0.9
DDX55-211ENST00000544429 KCNA5P22460 613 aa20.65■□□□□ 0.9
DDX55-211ENST00000544429 RPL13P26373 211 aaKnown RBP20.65■□□□□ 0.9
DDX55-211ENST00000544429 NDUFV1P49821 464 aa20.65■□□□□ 0.9
DDX55-211ENST00000544429 LRRC63Q05C16 580 aa20.65■□□□□ 0.9
DDX55-211ENST00000544429 PSMD5Q16401 504 aa20.65■□□□□ 0.9
DDX55-211ENST00000544429 DUOXA2Q1HG44 320 aa20.65■□□□□ 0.9
DDX55-211ENST00000544429 VARS2Q5ST30 1063 aaKnown RBP20.65■□□□□ 0.9
DDX55-211ENST00000544429 C1orf220Q5T0J3 134 aa20.65■□□□□ 0.9
DDX55-211ENST00000544429 LMBRD2Q68DH5 695 aaPredicted RBP20.65■□□□□ 0.9
DDX55-211ENST00000544429 ANKRD40Q6AI12 368 aa20.65■□□□□ 0.9
DDX55-211ENST00000544429 LILRA6Q6PI73 481 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms