RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 CREB1P16220 341 aa14.58□□□□□ -0.08
VPS33A-208ENST00000543633 CNGA1P29973 690 aa14.58□□□□□ -0.08
VPS33A-208ENST00000543633 CETN2P41208 172 aa14.58□□□□□ -0.08
VPS33A-208ENST00000543633 DMP1Q13316 513 aaPredicted RBP14.58□□□□□ -0.08
VPS33A-208ENST00000543633 MPP2Q14168 576 aa14.58□□□□□ -0.08
VPS33A-208ENST00000543633 IZUMO3Q5VZ72 239 aa14.58□□□□□ -0.08
VPS33A-208ENST00000543633 MON1BQ7L1V2 547 aa14.58□□□□□ -0.08
VPS33A-208ENST00000543633 ATG4AQ8WYN0 398 aa14.58□□□□□ -0.08
VPS33A-208ENST00000543633 MAML1Q92585 1016 aa14.58□□□□□ -0.08
VPS33A-208ENST00000543633 NTPCRQ9BSD7 190 aaKnown RBP14.58□□□□□ -0.08
VPS33A-208ENST00000543633 MRPL47Q9HD33 250 aaKnown RBP14.58□□□□□ -0.08
VPS33A-208ENST00000543633 ACP6Q9NPH0 428 aa14.58□□□□□ -0.08
VPS33A-208ENST00000543633 SMG5Q9UPR3 1016 aaKnown RBP14.58□□□□□ -0.08
VPS33A-208ENST00000543633 SCINQ9Y6U3 715 aa14.58□□□□□ -0.08
VPS33A-208ENST00000543633 KRT16P08779 473 aa14.58□□□□□ -0.08
VPS33A-208ENST00000543633 KLRC2P26717 231 aa14.58□□□□□ -0.08
VPS33A-208ENST00000543633 PTGER2P43116 358 aa14.58□□□□□ -0.08
VPS33A-208ENST00000543633 NSFP46459 744 aaKnown RBP14.58□□□□□ -0.08
VPS33A-208ENST00000543633 POLGP54098 1239 aaPredicted RBP14.58□□□□□ -0.08
VPS33A-208ENST00000543633 YARSP54577 528 aaKnown RBP14.58□□□□□ -0.08
VPS33A-208ENST00000543633 KRT76Q01546 638 aa14.58□□□□□ -0.08
VPS33A-208ENST00000543633 ACCSLQ4AC99 568 aa14.58□□□□□ -0.08
VPS33A-208ENST00000543633 C15orf39Q6ZRI6 1047 aa14.58□□□□□ -0.08
VPS33A-208ENST00000543633 SV2AQ7L0J3 742 aa14.58□□□□□ -0.08
VPS33A-208ENST00000543633 AGGF1Q8N302 714 aaeCLIP14.58□□□□□ -0.08
VPS33A-208ENST00000543633 CFAP61Q8NHU2 1237 aa14.58□□□□□ -0.08
VPS33A-208ENST00000543633 FAM151AQ8WW52 585 aa14.58□□□□□ -0.08
VPS33A-208ENST00000543633 INPP5DQ92835 1189 aa14.58□□□□□ -0.08
VPS33A-208ENST00000543633 TMEM237Q96Q45 408 aa14.58□□□□□ -0.08
VPS33A-208ENST00000543633 PHACTR1Q9C0D0 580 aa14.58□□□□□ -0.08
VPS33A-208ENST00000543633 KIAA1586Q9HCI6 787 aa14.58□□□□□ -0.08
VPS33A-208ENST00000543633 RPL26L1Q9UNX3 145 aaKnown RBP14.58□□□□□ -0.08
VPS33A-208ENST00000543633 WDR81Q562E7 1941 aa14.57□□□□□ -0.08
VPS33A-208ENST00000543633 WDR64B1ANS9 1081 aa14.57□□□□□ -0.08
VPS33A-208ENST00000543633 E7ENQ6 273 aa14.57□□□□□ -0.08
VPS33A-208ENST00000543633 H0YCG3 227 aa14.57□□□□□ -0.08
VPS33A-208ENST00000543633 TBC1D12O60347 775 aa14.57□□□□□ -0.08
VPS33A-208ENST00000543633 KRT5P13647 590 aa14.57□□□□□ -0.08
VPS33A-208ENST00000543633 RRM1P23921 792 aa14.57□□□□□ -0.08
VPS33A-208ENST00000543633 NPTX2P47972 431 aa14.57□□□□□ -0.08
VPS33A-208ENST00000543633 RTP1P59025 263 aa14.57□□□□□ -0.08
VPS33A-208ENST00000543633 SETDB1Q15047 1291 aa14.57□□□□□ -0.08
VPS33A-208ENST00000543633 SMYD5Q6GMV2 418 aa14.57□□□□□ -0.08
VPS33A-208ENST00000543633 ANKS1BQ7Z6G8 1248 aa14.57□□□□□ -0.08
VPS33A-208ENST00000543633 TRABD2AQ86V40 505 aa14.57□□□□□ -0.08
VPS33A-208ENST00000543633 SRRM1Q8IYB3 904 aaKnown RBP14.57□□□□□ -0.08
VPS33A-208ENST00000543633 GPD1LQ8N335 351 aa14.57□□□□□ -0.08
VPS33A-208ENST00000543633 OGFOD1Q8N543 542 aa14.57□□□□□ -0.08
VPS33A-208ENST00000543633 GDAP1Q8TB36 358 aa14.57□□□□□ -0.08
VPS33A-208ENST00000543633 CCDC127Q96BQ5 260 aa14.57□□□□□ -0.08
VPS33A-208ENST00000543633 RMDN2Q96LZ7 410 aa14.57□□□□□ -0.08
VPS33A-208ENST00000543633 OSBPL8Q9BZF1 889 aa14.57□□□□□ -0.08
VPS33A-208ENST00000543633 LRMDAQ9H2I8 198 aa14.57□□□□□ -0.08
VPS33A-208ENST00000543633 CCPG1Q9ULG6 757 aa14.57□□□□□ -0.08
VPS33A-208ENST00000543633 USH1CQ9Y6N9 552 aa14.57□□□□□ -0.08
VPS33A-208ENST00000543633 FAM170AA1A519 330 aa14.56□□□□□ -0.08
VPS33A-208ENST00000543633 RASA4BC9J798 803 aa14.56□□□□□ -0.08
VPS33A-208ENST00000543633 RASA4O43374 803 aa14.56□□□□□ -0.08
VPS33A-208ENST00000543633 DCTN3O75935 186 aa14.56□□□□□ -0.08
VPS33A-208ENST00000543633 ASMTLO95671 621 aa14.56□□□□□ -0.08
VPS33A-208ENST00000543633 GH1P01241 217 aa14.56□□□□□ -0.08
VPS33A-208ENST00000543633 RALAP11233 206 aa14.56□□□□□ -0.08
VPS33A-208ENST00000543633 MAGEA4P43358 317 aa14.56□□□□□ -0.08
VPS33A-208ENST00000543633 CLDN10P78369 228 aa14.56□□□□□ -0.08
VPS33A-208ENST00000543633 MTMR1Q13613 665 aa14.56□□□□□ -0.08
VPS33A-208ENST00000543633 ZKSCAN8Q15776 578 aaPredicted RBP14.56□□□□□ -0.08
VPS33A-208ENST00000543633 ECHDC2Q86YB7 292 aa14.56□□□□□ -0.08
VPS33A-208ENST00000543633 CYP4X1Q8N118 509 aa14.56□□□□□ -0.08
VPS33A-208ENST00000543633 SH3TC2Q8TF17 1288 aa14.56□□□□□ -0.08
VPS33A-208ENST00000543633 KCNN1Q92952 543 aa14.56□□□□□ -0.08
VPS33A-208ENST00000543633 SAAL1Q96ER3 474 aa14.56□□□□□ -0.08
VPS33A-208ENST00000543633 HERPUD2Q9BSE4 406 aa14.56□□□□□ -0.08
VPS33A-208ENST00000543633 PITPNM3Q9BZ71 974 aa14.56□□□□□ -0.08
VPS33A-208ENST00000543633 SSU72Q9NP77 194 aaKnown RBP14.56□□□□□ -0.08
VPS33A-208ENST00000543633 KMT5AQ9NQR1 393 aa14.56□□□□□ -0.08
VPS33A-208ENST00000543633 TCEAL9Q9UHQ7 104 aa14.56□□□□□ -0.08
VPS33A-208ENST00000543633 R3HDM2Q9Y2K5 976 aaKnown RBP14.56□□□□□ -0.08
VPS33A-208ENST00000543633 DENND3A2RUS2 1198 aa14.56□□□□□ -0.08
VPS33A-208ENST00000543633 DNALI1O14645 258 aaPredicted RBP14.56□□□□□ -0.08
VPS33A-208ENST00000543633 LUC7L3O95232 432 aaKnown RBP14.56□□□□□ -0.08
VPS33A-208ENST00000543633 CETPP11597 493 aa14.56□□□□□ -0.08
VPS33A-208ENST00000543633 MCL1Q07820 350 aa14.56□□□□□ -0.08
VPS33A-208ENST00000543633 MGAT5Q09328 741 aa14.56□□□□□ -0.08
VPS33A-208ENST00000543633 SPP2Q13103 211 aa14.56□□□□□ -0.08
VPS33A-208ENST00000543633 MKRN4PQ13434 485 aaPredicted RBP14.56□□□□□ -0.08
VPS33A-208ENST00000543633 SPARCL1Q14515 664 aa14.56□□□□□ -0.08
VPS33A-208ENST00000543633 CCDC142Q17RM4 750 aa14.56□□□□□ -0.08
VPS33A-208ENST00000543633 BRDTQ58F21 947 aaPredicted RBP14.56□□□□□ -0.08
VPS33A-208ENST00000543633 CMPK2Q5EBM0 449 aa14.56□□□□□ -0.08
VPS33A-208ENST00000543633 TMEM63BQ5T3F8 832 aa14.56□□□□□ -0.08
VPS33A-208ENST00000543633 FAM102BQ5T8I3 360 aa14.56□□□□□ -0.08
VPS33A-208ENST00000543633 PHF13Q86YI8 300 aaPredicted RBP14.56□□□□□ -0.08
VPS33A-208ENST00000543633 IL31RAQ8NI17 732 aa14.56□□□□□ -0.08
VPS33A-208ENST00000543633 DENND1AQ8TEH3 1009 aa14.56□□□□□ -0.08
VPS33A-208ENST00000543633 CLEC4DQ8WXI8 215 aa14.56□□□□□ -0.08
VPS33A-208ENST00000543633 RBM41Q96IZ5 413 aaKnown RBP14.56□□□□□ -0.08
VPS33A-208ENST00000543633 RBM15Q96T37 977 aaKnown RBP eCLIP14.56□□□□□ -0.08
VPS33A-208ENST00000543633 COL20A1Q9P218 1284 aa14.56□□□□□ -0.08
VPS33A-208ENST00000543633 FETUBQ9UGM5 382 aa14.56□□□□□ -0.08
VPS33A-208ENST00000543633 PNMA3Q9UL41 463 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms