RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 TRAIPQ9BWF2 469 aa14.35□□□□□ -0.11
PPME1-208ENST00000543525 OSBPL7Q9BZF2 842 aa14.35□□□□□ -0.11
PPME1-208ENST00000543525 CCDC113Q9H0I3 377 aa14.35□□□□□ -0.11
PPME1-208ENST00000543525 PICK1Q9NRD5 415 aa14.35□□□□□ -0.11
PPME1-208ENST00000543525 ANAPC5Q9UJX4 755 aa14.35□□□□□ -0.11
PPME1-208ENST00000543525 ZNFX1Q9P2E3 1918 aaKnown RBP14.35□□□□□ -0.11
PPME1-208ENST00000543525 RGS20O76081 388 aa14.35□□□□□ -0.11
PPME1-208ENST00000543525 PIGRP01833 764 aa14.35□□□□□ -0.11
PPME1-208ENST00000543525 CETN2P41208 172 aa14.35□□□□□ -0.11
PPME1-208ENST00000543525 ITGA8P53708 1063 aa14.35□□□□□ -0.11
PPME1-208ENST00000543525 NLRP11P59045 1033 aaKnown RBP14.35□□□□□ -0.11
PPME1-208ENST00000543525 LLGL1Q15334 1064 aa14.35□□□□□ -0.11
PPME1-208ENST00000543525 CNGA2Q16280 664 aa14.35□□□□□ -0.11
PPME1-208ENST00000543525 LMBRD2Q68DH5 695 aaPredicted RBP14.35□□□□□ -0.11
PPME1-208ENST00000543525 KCNV1Q6PIU1 500 aa14.35□□□□□ -0.11
PPME1-208ENST00000543525 ABRAQ8N0Z2 381 aa14.35□□□□□ -0.11
PPME1-208ENST00000543525 IPO4Q8TEX9 1081 aaKnown RBP14.35□□□□□ -0.11
PPME1-208ENST00000543525 DDX23Q9BUQ8 820 aaKnown RBP14.35□□□□□ -0.11
PPME1-208ENST00000543525 TRIM7Q9C029 511 aa14.35□□□□□ -0.11
PPME1-208ENST00000543525 AAASQ9NRG9 546 aa14.35□□□□□ -0.11
PPME1-208ENST00000543525 SAMD15Q9P1V8 674 aa14.35□□□□□ -0.11
PPME1-208ENST00000543525 SCINQ9Y6U3 715 aa14.35□□□□□ -0.11
PPME1-208ENST00000543525 CCT8L1PA6NM43 557 aa14.34□□□□□ -0.11
PPME1-208ENST00000543525 VGLL3A8MV65 326 aa14.34□□□□□ -0.11
PPME1-208ENST00000543525 ACO1P21399 889 aaKnown RBP14.34□□□□□ -0.11
PPME1-208ENST00000543525 TBXAS1P24557 533 aaPredicted RBP14.34□□□□□ -0.11
PPME1-208ENST00000543525 IVDP26440 423 aa14.34□□□□□ -0.11
PPME1-208ENST00000543525 ADCY8P40145 1251 aa14.34□□□□□ -0.11
PPME1-208ENST00000543525 GTF2A1P52655 376 aaPredicted RBP14.34□□□□□ -0.11
PPME1-208ENST00000543525 TGFB2P61812 414 aa14.34□□□□□ -0.11
PPME1-208ENST00000543525 CCNG2Q16589 344 aa14.34□□□□□ -0.11
PPME1-208ENST00000543525 CEP128Q6ZU80 1094 aa14.34□□□□□ -0.11
PPME1-208ENST00000543525 PIGWQ7Z7B1 504 aa14.34□□□□□ -0.11
PPME1-208ENST00000543525 PHLDB2Q86SQ0 1253 aa14.34□□□□□ -0.11
PPME1-208ENST00000543525 PHF13Q86YI8 300 aaPredicted RBP14.34□□□□□ -0.11
PPME1-208ENST00000543525 KATNAL2Q8IYT4 538 aa14.34□□□□□ -0.11
PPME1-208ENST00000543525 LRRC34Q8IZ02 419 aa14.34□□□□□ -0.11
PPME1-208ENST00000543525 DEPTORQ8TB45 409 aa14.34□□□□□ -0.11
PPME1-208ENST00000543525 ATG4AQ8WYN0 398 aa14.34□□□□□ -0.11
PPME1-208ENST00000543525 CCT6BQ92526 530 aa14.34□□□□□ -0.11
PPME1-208ENST00000543525 C12orf42Q96LP6 360 aa14.34□□□□□ -0.11
PPME1-208ENST00000543525 CGRRF1Q99675 332 aa14.34□□□□□ -0.11
PPME1-208ENST00000543525 PRMT1Q99873 361 aaKnown RBP14.34□□□□□ -0.11
PPME1-208ENST00000543525 ACAD9Q9H845 621 aa14.34□□□□□ -0.11
PPME1-208ENST00000543525 ADAM22Q9P0K1 906 aa14.34□□□□□ -0.11
PPME1-208ENST00000543525 ADAMTS5Q9UNA0 930 aa14.34□□□□□ -0.11
PPME1-208ENST00000543525 ATP2A1O14983 1001 aa14.33□□□□□ -0.11
PPME1-208ENST00000543525 SLC34A2O95436 690 aa14.33□□□□□ -0.11
PPME1-208ENST00000543525 VNN1O95497 513 aa14.33□□□□□ -0.11
PPME1-208ENST00000543525 ACSL3O95573 720 aa14.33□□□□□ -0.11
PPME1-208ENST00000543525 TTC4O95801 387 aa14.33□□□□□ -0.11
PPME1-208ENST00000543525 VIMP08670 466 aaKnown RBP14.33□□□□□ -0.11
PPME1-208ENST00000543525 GNA15P30679 374 aa14.33□□□□□ -0.11
PPME1-208ENST00000543525 CHKAP35790 457 aa14.33□□□□□ -0.11
PPME1-208ENST00000543525 NAMPTP43490 491 aa14.33□□□□□ -0.11
PPME1-208ENST00000543525 ACOT2P49753 483 aa14.33□□□□□ -0.11
PPME1-208ENST00000543525 C1QBPQ07021 282 aaKnown RBP14.33□□□□□ -0.11
PPME1-208ENST00000543525 LONRF1Q17RB8 773 aa14.33□□□□□ -0.11
PPME1-208ENST00000543525 NBPF12Q5TAG4 269 aaPredicted RBP14.33□□□□□ -0.11
PPME1-208ENST00000543525 ZNF365Q70YC5 407 aa14.33□□□□□ -0.11
PPME1-208ENST00000543525 EXOC3L1Q86VI1 746 aa14.33□□□□□ -0.11
PPME1-208ENST00000543525 FAM84AQ96KN4 292 aa14.33□□□□□ -0.11
PPME1-208ENST00000543525 C11orf70Q9BRQ4 267 aa14.33□□□□□ -0.11
PPME1-208ENST00000543525 SLC40A1Q9NP59 571 aa14.33□□□□□ -0.11
PPME1-208ENST00000543525 ZNF302Q9NR11 478 aa14.33□□□□□ -0.11
PPME1-208ENST00000543525 CYP39A1Q9NYL5 469 aa14.33□□□□□ -0.11
PPME1-208ENST00000543525 RBAKQ9NYW8 714 aaPredicted RBP14.33□□□□□ -0.11
PPME1-208ENST00000543525 DOCK1Q14185 1865 aa14.33□□□□□ -0.12
PPME1-208ENST00000543525 WDR81Q562E7 1941 aa14.33□□□□□ -0.12
PPME1-208ENST00000543525 UMODL1Q5DID0 1318 aa14.33□□□□□ -0.12
PPME1-208ENST00000543525 C19orf81C9J6K1 198 aa14.33□□□□□ -0.12
PPME1-208ENST00000543525 K7ERI5 159 aa14.33□□□□□ -0.12
PPME1-208ENST00000543525 DNM1LO00429 736 aa14.33□□□□□ -0.12
PPME1-208ENST00000543525 TP73O15350 636 aa14.33□□□□□ -0.12
PPME1-208ENST00000543525 THAP12O43422 761 aa14.33□□□□□ -0.12
PPME1-208ENST00000543525 TCEA3O75764 348 aa14.33□□□□□ -0.12
PPME1-208ENST00000543525 CLTAP09496 248 aa14.33□□□□□ -0.12
PPME1-208ENST00000543525 RALAP11233 206 aa14.33□□□□□ -0.12
PPME1-208ENST00000543525 PTPRAP18433 802 aa14.33□□□□□ -0.12
PPME1-208ENST00000543525 SCTRP47872 440 aa14.33□□□□□ -0.12
PPME1-208ENST00000543525 NOMO3P69849 1222 aa14.33□□□□□ -0.12
PPME1-208ENST00000543525 TRIP13Q15645 432 aaPredicted RBP14.33□□□□□ -0.12
PPME1-208ENST00000543525 SPOPLQ6IQ16 392 aa14.33□□□□□ -0.12
PPME1-208ENST00000543525 PLEKHA7Q6IQ23 1121 aa14.33□□□□□ -0.12
PPME1-208ENST00000543525 CCDC89Q8N998 374 aa14.33□□□□□ -0.12
PPME1-208ENST00000543525 RBBP8NLQ8NC74 664 aaPredicted RBP14.33□□□□□ -0.12
PPME1-208ENST00000543525 EXD1Q8NHP7 514 aa14.33□□□□□ -0.12
PPME1-208ENST00000543525 ARHGEF2Q92974 986 aaKnown RBP14.33□□□□□ -0.12
PPME1-208ENST00000543525 TMEM143Q96AN5 459 aa14.33□□□□□ -0.12
PPME1-208ENST00000543525 HERPUD2Q9BSE4 406 aa14.33□□□□□ -0.12
PPME1-208ENST00000543525 MSTO1Q9BUK6 570 aa14.33□□□□□ -0.12
PPME1-208ENST00000543525 TEX13BQ9BXU2 312 aa14.33□□□□□ -0.12
PPME1-208ENST00000543525 PORCNQ9H237 461 aa14.33□□□□□ -0.12
PPME1-208ENST00000543525 KLC4Q9NSK0 619 aa14.33□□□□□ -0.12
PPME1-208ENST00000543525 PIM2Q9P1W9 311 aa14.33□□□□□ -0.12
PPME1-208ENST00000543525 HACL1Q9UJ83 578 aa14.33□□□□□ -0.12
PPME1-208ENST00000543525 ZNF112Q9UJU3 913 aa14.33□□□□□ -0.12
PPME1-208ENST00000543525 ZNF214Q9UL59 606 aaPredicted RBP14.33□□□□□ -0.12
PPME1-208ENST00000543525 TELO2Q9Y4R8 837 aa14.33□□□□□ -0.12
PPME1-208ENST00000543525 PARP14Q460N5 1801 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms