RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 PCDHB8Q9UN66 801 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 ITM2BQ9Y287 266 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 DEPDC5O75140 1603 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 IQANK1A0A1B0GTG1 560 aa7.27□□□□□ -1.24
SRGAP1-206ENST00000543397 A0A1W2PQC6 194 aa7.27□□□□□ -1.24
SRGAP1-206ENST00000543397 E5RI56 91 aa7.27□□□□□ -1.24
SRGAP1-206ENST00000543397 H7C4K7 107 aa7.27□□□□□ -1.24
SRGAP1-206ENST00000543397 GNL1P36915 607 aaPredicted RBP7.27□□□□□ -1.24
SRGAP1-206ENST00000543397 TMC7Q7Z402 723 aa7.27□□□□□ -1.24
SRGAP1-206ENST00000543397 ADGRA1Q86SQ6 560 aa7.27□□□□□ -1.24
SRGAP1-206ENST00000543397 LMNTD2Q8IXW0 634 aa7.27□□□□□ -1.24
SRGAP1-206ENST00000543397 OR6P1Q8NGX9 317 aa7.27□□□□□ -1.24
SRGAP1-206ENST00000543397 FAM163AQ96GL9 167 aaPredicted RBP7.27□□□□□ -1.24
SRGAP1-206ENST00000543397 AGPAT1Q99943 283 aa7.27□□□□□ -1.24
SRGAP1-206ENST00000543397 KCNQ5Q9NR82 932 aa7.27□□□□□ -1.24
SRGAP1-206ENST00000543397 OLA1Q9NTK5 396 aaKnown RBP7.27□□□□□ -1.24
SRGAP1-206ENST00000543397 DPP7Q9UHL4 492 aa7.27□□□□□ -1.24
SRGAP1-206ENST00000543397 IQGAP1P46940 1657 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 TTC26A0AVF1 554 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 OGTO15294 1046 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 ARP10275 920 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 PYGBP11216 843 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 CASP2P42575 452 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 ACADSBP45954 432 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 IFNAR2P48551 515 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 STK4Q13043 487 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 TLK2Q86UE8 772 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 RFFLQ8WZ73 363 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 SARS2Q9NP81 518 aaKnown RBP7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 KIAA1522Q9P206 1035 aaPredicted RBP7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 TBK1Q9UHD2 729 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 SYNDIG1LA6NDD5 238 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 MSCO60682 206 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 FAM200BP0CF97 657 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 IRF1P10914 325 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 TAC1P20366 129 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 NAMPTP43490 491 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 HARS2P49590 506 aaKnown RBP7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 PLA2G4EQ3MJ16 856 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 SARM1Q6SZW1 724 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 TRIM67Q6ZTA4 783 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 PID1Q7Z2X4 250 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 METTL16Q86W50 562 aaKnown RBP7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 CD302Q8IX05 232 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 USP33Q8TEY7 942 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 CENPOQ9BU64 300 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 KIFC3Q9BVG8 833 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 TMEM8AQ9HCN3 771 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 PDE11AQ9HCR9 933 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 DNAJC17Q9NVM6 304 aaKnown RBP7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 LZTS1Q9Y250 596 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 PCDHB12Q9Y5F1 795 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 SNX2O60749 519 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 VTNP04004 478 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 ITGB3P05106 788 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 PTPRAP18433 802 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 ARHGAP25P42331 645 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 ROR1Q01973 937 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 SP3Q02447 781 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 TAF2Q6P1X5 1199 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 POTEAQ6S8J7 498 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 ADSSL1Q8N142 457 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 SLC4A9Q96Q91 983 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 SENP7Q9BQF6 1050 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 TBX20Q9UMR3 447 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 SLC37A4O43826 429 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 ASMTLO95671 621 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 ZNF286BP0CG31 522 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 SLCO1A2P46721 670 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 GNGT1P63211 74 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 SYT2Q8N9I0 419 aaPredicted RBP7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 MRPS31Q92665 395 aaKnown RBP7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 SH3KBP1Q96B97 665 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 SYT17Q9BSW7 474 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 STK33Q9BYT3 514 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 MUC3BQ9H195 1237 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 SAYSD1Q9NPB0 183 aa7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.27□□□□□ -1.25
SRGAP1-206ENST00000543397 RASSF10A6NK89 507 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 TTI1O43156 1089 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 TOM1L1O75674 476 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 KRT38O76015 456 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 WEE2P0C1S8 567 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 MUTP22033 750 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 PSMA4P25789 261 aaKnown RBP7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 FKBP1BP68106 108 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 NSUN2Q08J23 767 aaKnown RBP eCLIP7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 ELAVL2Q12926 359 aaKnown RBP7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 C10orf120Q5SQS8 335 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 TDRD10Q5VZ19 366 aaKnown RBP7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 IL31Q6EBC2 164 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 RNF10Q8N5U6 811 aaKnown RBP7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 OSMRQ99650 979 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 MED4Q9NPJ6 270 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 DDX4Q9NQI0 724 aaKnown RBP7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 SETD4Q9NVD3 440 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 TAF6LQ9Y6J9 622 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 PI4K2BG5E9Z4 385 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 RASGRF2O14827 1237 aa7.26□□□□□ -1.25
SRGAP1-206ENST00000543397 ADCY3O60266 1144 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms