RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 KRT13P13646 458 aa18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 ERCC5P28715 1186 aaPredicted RBP18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 VAMP7P51809 220 aa18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 NFKBIBQ15653 356 aa18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 TAS1R1Q7RTX1 841 aa18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 TMC7Q7Z402 723 aa18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 FILIP1Q7Z7B0 1213 aa18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 USP37Q86T82 979 aa18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 CSGALNACT2Q8N6G5 542 aa18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 MICAL1Q8TDZ2 1067 aa18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 ZNF516Q92618 1163 aa18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 FAM84AQ96KN4 292 aa18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 MED15Q96RN5 788 aa18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 ENTPD7Q9NQZ7 604 aa18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 ITGA11Q9UKX5 1188 aa18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 NUB1Q9Y5A7 615 aa18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 CSPG5O95196 566 aa18.48■□□□□ 0.55
RABGGTA-203ENST00000543002 ITGB3P05106 788 aa18.48■□□□□ 0.55
RABGGTA-203ENST00000543002 PAX3P23760 479 aa18.48■□□□□ 0.55
RABGGTA-203ENST00000543002 BRCC3P46736 316 aa18.48■□□□□ 0.55
RABGGTA-203ENST00000543002 AP3M2P53677 418 aa18.48■□□□□ 0.55
RABGGTA-203ENST00000543002 DLG4P78352 724 aa18.48■□□□□ 0.55
RABGGTA-203ENST00000543002 BFSP1Q12934 665 aa18.48■□□□□ 0.55
RABGGTA-203ENST00000543002 SMC1AQ14683 1233 aaKnown RBP18.48■□□□□ 0.55
RABGGTA-203ENST00000543002 BMS1Q14692 1282 aaKnown RBP18.48■□□□□ 0.55
RABGGTA-203ENST00000543002 USP41Q3LFD5 358 aa18.48■□□□□ 0.55
RABGGTA-203ENST00000543002 TIGD5Q53EQ6 642 aa18.48■□□□□ 0.55
RABGGTA-203ENST00000543002 TRAPPC11Q7Z392 1133 aa18.48■□□□□ 0.55
RABGGTA-203ENST00000543002 CXorf38Q8TB03 319 aa18.48■□□□□ 0.55
RABGGTA-203ENST00000543002 CHST7Q9NS84 486 aa18.48■□□□□ 0.55
RABGGTA-203ENST00000543002 ANO10Q9NW15 660 aa18.48■□□□□ 0.55
RABGGTA-203ENST00000543002 SIX4Q9UIU6 781 aa18.48■□□□□ 0.55
RABGGTA-203ENST00000543002 PRRC2BQ5JSZ5 2229 aaKnown RBP18.47■□□□□ 0.55
RABGGTA-203ENST00000543002 IKBKBO14920 756 aa18.47■□□□□ 0.55
RABGGTA-203ENST00000543002 LETM1O95202 739 aaPredicted RBP18.47■□□□□ 0.55
RABGGTA-203ENST00000543002 FGFR1OPO95684 399 aaKnown RBP18.47■□□□□ 0.55
RABGGTA-203ENST00000543002 CXCL14O95715 111 aa18.47■□□□□ 0.55
RABGGTA-203ENST00000543002 POLR2BP30876 1174 aaKnown RBP18.47■□□□□ 0.55
RABGGTA-203ENST00000543002 GLUD2P49448 558 aa18.47■□□□□ 0.55
RABGGTA-203ENST00000543002 AARSP49588 968 aaKnown RBP eCLIP18.47■□□□□ 0.55
RABGGTA-203ENST00000543002 RBP5P82980 135 aa18.47■□□□□ 0.55
RABGGTA-203ENST00000543002 DSG1Q02413 1049 aa18.47■□□□□ 0.55
RABGGTA-203ENST00000543002 STX1AQ16623 288 aa18.47■□□□□ 0.55
RABGGTA-203ENST00000543002 C1orf220Q5T0J3 134 aa18.47■□□□□ 0.55
RABGGTA-203ENST00000543002 FAM171A1Q5VUB5 890 aa18.47■□□□□ 0.55
RABGGTA-203ENST00000543002 PLPP4Q5VZY2 271 aa18.47■□□□□ 0.55
RABGGTA-203ENST00000543002 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.47■□□□□ 0.55
RABGGTA-203ENST00000543002 GPR65Q8IYL9 337 aa18.47■□□□□ 0.55
RABGGTA-203ENST00000543002 LRRC52Q8N7C0 313 aa18.47■□□□□ 0.55
RABGGTA-203ENST00000543002 MRPL43Q8N983 215 aaKnown RBP18.47■□□□□ 0.55
RABGGTA-203ENST00000543002 SUSD3Q96L08 255 aa18.47■□□□□ 0.55
RABGGTA-203ENST00000543002 SRRTQ9BXP5 876 aaKnown RBP18.47■□□□□ 0.55
RABGGTA-203ENST00000543002 NSUN3Q9H649 340 aaKnown RBP18.47■□□□□ 0.55
RABGGTA-203ENST00000543002 AGAP1Q9UPQ3 857 aa18.47■□□□□ 0.55
RABGGTA-203ENST00000543002 PCDHGC5Q9Y5F6 944 aa18.47■□□□□ 0.55
RABGGTA-203ENST00000543002 IRAK3Q9Y616 596 aa18.47■□□□□ 0.55
RABGGTA-203ENST00000543002 I3L4J1 428 aa18.46■□□□□ 0.55
RABGGTA-203ENST00000543002 URODP06132 367 aa18.46■□□□□ 0.55
RABGGTA-203ENST00000543002 FGFR3P22607 806 aa18.46■□□□□ 0.55
RABGGTA-203ENST00000543002 PNPLA4P41247 253 aa18.46■□□□□ 0.55
RABGGTA-203ENST00000543002 TAF6P49848 677 aa18.46■□□□□ 0.55
RABGGTA-203ENST00000543002 LILRA4P59901 499 aa18.46■□□□□ 0.55
RABGGTA-203ENST00000543002 KIAA0319Q5VV43 1072 aa18.46■□□□□ 0.55
RABGGTA-203ENST00000543002 KIAA1841Q6NSI8 718 aa18.46■□□□□ 0.55
RABGGTA-203ENST00000543002 FRMD5Q7Z6J6 570 aa18.46■□□□□ 0.55
RABGGTA-203ENST00000543002 ZNF560Q96MR9 790 aa18.46■□□□□ 0.55
RABGGTA-203ENST00000543002 TTPALQ9BTX7 342 aa18.46■□□□□ 0.55
RABGGTA-203ENST00000543002 METTL14Q9HCE5 456 aaKnown RBP18.46■□□□□ 0.55
RABGGTA-203ENST00000543002 MRPL17Q9NRX2 175 aaKnown RBP18.46■□□□□ 0.55
RABGGTA-203ENST00000543002 ARMCX3Q9UH62 379 aaPredicted RBP18.46■□□□□ 0.55
RABGGTA-203ENST00000543002 SSX2IPQ9Y2D8 614 aa18.46■□□□□ 0.55
RABGGTA-203ENST00000543002 STXBP5LQ9Y2K9 1186 aa18.46■□□□□ 0.55
RABGGTA-203ENST00000543002 MYO7AQ13402 2215 aa18.46■□□□□ 0.55
RABGGTA-203ENST00000543002 CDH23Q9H251 3354 aa18.45■□□□□ 0.54
RABGGTA-203ENST00000543002 C2orf71A6NGG8 1288 aa18.45■□□□□ 0.54
RABGGTA-203ENST00000543002 HIDE1A8MVS5 230 aa18.45■□□□□ 0.54
RABGGTA-203ENST00000543002 SYN3O14994 580 aa18.45■□□□□ 0.54
RABGGTA-203ENST00000543002 SPTLC1O15269 473 aa18.45■□□□□ 0.54
RABGGTA-203ENST00000543002 LILRB3O75022 631 aa18.45■□□□□ 0.54
RABGGTA-203ENST00000543002 GNA14O95837 355 aa18.45■□□□□ 0.54
RABGGTA-203ENST00000543002 C4BPAP04003 597 aaKnown RBP18.45■□□□□ 0.54
RABGGTA-203ENST00000543002 KRT19P08727 400 aa18.45■□□□□ 0.54
RABGGTA-203ENST00000543002 TRIM49P0CI25 452 aa18.45■□□□□ 0.54
RABGGTA-203ENST00000543002 TRIM49CP0CI26 452 aa18.45■□□□□ 0.54
RABGGTA-203ENST00000543002 TYRO3Q06418 890 aa18.45■□□□□ 0.54
RABGGTA-203ENST00000543002 PTPN14Q15678 1187 aa18.45■□□□□ 0.54
RABGGTA-203ENST00000543002 RTP2Q5QGT7 225 aa18.45■□□□□ 0.54
RABGGTA-203ENST00000543002 SCARA3Q6AZY7 606 aa18.45■□□□□ 0.54
RABGGTA-203ENST00000543002 CEP57Q86XR8 500 aa18.45■□□□□ 0.54
RABGGTA-203ENST00000543002 AUTS2Q8WXX7 1259 aa18.45■□□□□ 0.54
RABGGTA-203ENST00000543002 PPP2R3CQ969Q6 453 aa18.45■□□□□ 0.54
RABGGTA-203ENST00000543002 B3GALT6Q96L58 329 aa18.45■□□□□ 0.54
RABGGTA-203ENST00000543002 R3HCC1Q9Y3T6 440 aaKnown RBP18.45■□□□□ 0.54
RABGGTA-203ENST00000543002 ATG2AQ2TAZ0 1938 aa18.44■□□□□ 0.54
RABGGTA-203ENST00000543002 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.44■□□□□ 0.54
RABGGTA-203ENST00000543002 M0QZQ0 153 aa18.44■□□□□ 0.54
RABGGTA-203ENST00000543002 CST3P01034 146 aaPredicted RBP18.44■□□□□ 0.54
RABGGTA-203ENST00000543002 TKTP29401 623 aaKnown RBP18.44■□□□□ 0.54
RABGGTA-203ENST00000543002 ZACNQ401N2 412 aa18.44■□□□□ 0.54
RABGGTA-203ENST00000543002 SV2CQ496J9 727 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms