RNA–Protein interactions for RNA: ENST00000542765.4

LDHB-209, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-209ENST00000542765 RPLP2P05387 115 aaKnown RBP4.48□□□□□ -1.69
LDHB-209ENST00000542765 CD1AP06126 327 aa4.48□□□□□ -1.69
LDHB-209ENST00000542765 ALAS1P13196 640 aa4.48□□□□□ -1.69
LDHB-209ENST00000542765 ATP2B3Q16720 1220 aa4.48□□□□□ -1.69
LDHB-209ENST00000542765 PGS1Q32NB8 556 aa4.48□□□□□ -1.69
LDHB-209ENST00000542765 KHDC1Q4VXA5 237 aaKnown RBP4.48□□□□□ -1.69
LDHB-209ENST00000542765 PABPC1LQ4VXU2 614 aaKnown RBP4.48□□□□□ -1.69
LDHB-209ENST00000542765 ATAT1Q5SQI0 421 aa4.48□□□□□ -1.69
LDHB-209ENST00000542765 CCDC181Q5TID7 509 aa4.48□□□□□ -1.69
LDHB-209ENST00000542765 AGAP9Q5VTM2 703 aa4.48□□□□□ -1.69
LDHB-209ENST00000542765 SLC4A10Q6U841 1118 aa4.48□□□□□ -1.69
LDHB-209ENST00000542765 B3GNT9Q6UX72 402 aa4.48□□□□□ -1.69
LDHB-209ENST00000542765 MRGPRGQ86SM5 289 aa4.48□□□□□ -1.69
LDHB-209ENST00000542765 RHOT2Q8IXI1 618 aa4.48□□□□□ -1.69
LDHB-209ENST00000542765 RGMAQ96B86 450 aa4.48□□□□□ -1.69
LDHB-209ENST00000542765 MVB12AQ96EY5 273 aa4.48□□□□□ -1.69
LDHB-209ENST00000542765 AIFM3Q96NN9 605 aa4.48□□□□□ -1.69
LDHB-209ENST00000542765 FAM193BQ96PV7 902 aaPredicted RBP4.48□□□□□ -1.69
LDHB-209ENST00000542765 MAP3K14Q99558 947 aa4.48□□□□□ -1.69
LDHB-209ENST00000542765 SLC46A2Q9BY10 475 aa4.48□□□□□ -1.69
LDHB-209ENST00000542765 NMRK2Q9NPI5 230 aa4.48□□□□□ -1.69
LDHB-209ENST00000542765 DDX20Q9UHI6 824 aaKnown RBP4.48□□□□□ -1.69
LDHB-209ENST00000542765 USP15Q9Y4E8 981 aaPredicted RBP4.48□□□□□ -1.69
LDHB-209ENST00000542765 DMRT1Q9Y5R6 373 aa4.48□□□□□ -1.69
LDHB-209ENST00000542765 CDHR4A6H8M9 788 aa4.47□□□□□ -1.69
LDHB-209ENST00000542765 NT5C1B-RDH14C9J2C7 533 aa4.47□□□□□ -1.69
LDHB-209ENST00000542765 KIF3BO15066 747 aa4.47□□□□□ -1.69
LDHB-209ENST00000542765 PRC1O43663 620 aa4.47□□□□□ -1.69
LDHB-209ENST00000542765 NCR1O76036 304 aa4.47□□□□□ -1.69
LDHB-209ENST00000542765 HAUS5O94927 633 aa4.47□□□□□ -1.69
LDHB-209ENST00000542765 U2AF1L5P0DN76 240 aaPredicted RBP4.47□□□□□ -1.69
LDHB-209ENST00000542765 MTHFD1P11586 935 aaKnown RBP4.47□□□□□ -1.69
LDHB-209ENST00000542765 MALP21145 153 aa4.47□□□□□ -1.69
LDHB-209ENST00000542765 PROZP22891 400 aa4.47□□□□□ -1.69
LDHB-209ENST00000542765 GCSHP23434 173 aa4.47□□□□□ -1.69
LDHB-209ENST00000542765 PTGS2P35354 604 aa4.47□□□□□ -1.69
LDHB-209ENST00000542765 U2AF1Q01081 240 aaKnown RBP eCLIP4.47□□□□□ -1.69
LDHB-209ENST00000542765 SNAPC2Q13487 334 aa4.47□□□□□ -1.69
LDHB-209ENST00000542765 SMN1Q16637 294 aaKnown RBP4.47□□□□□ -1.69
LDHB-209ENST00000542765 FLYWCH1Q4VC44 716 aa4.47□□□□□ -1.69
LDHB-209ENST00000542765 CAMKK1Q8N5S9 505 aa4.47□□□□□ -1.69
LDHB-209ENST00000542765 OR56A1Q8NGH5 318 aa4.47□□□□□ -1.69
LDHB-209ENST00000542765 PPP1R35Q8TAP8 253 aa4.47□□□□□ -1.69
LDHB-209ENST00000542765 DIS3LQ8TF46 1054 aaKnown RBP4.47□□□□□ -1.69
LDHB-209ENST00000542765 TIFAQ96CG3 184 aa4.47□□□□□ -1.69
LDHB-209ENST00000542765 ACO2Q99798 780 aaKnown RBP4.47□□□□□ -1.69
LDHB-209ENST00000542765 MLST8Q9BVC4 326 aa4.47□□□□□ -1.69
LDHB-209ENST00000542765 GSTO2Q9H4Y5 243 aa4.47□□□□□ -1.69
LDHB-209ENST00000542765 NRDE2Q9H7Z3 1164 aa4.47□□□□□ -1.69
LDHB-209ENST00000542765 KLHL11Q9NVR0 708 aa4.47□□□□□ -1.69
LDHB-209ENST00000542765 OBP2AQ9NY56 170 aa4.47□□□□□ -1.69
LDHB-209ENST00000542765 COL4A3Q01955 1670 aa4.47□□□□□ -1.69
LDHB-209ENST00000542765 CCDC78A2IDD5 438 aa4.46□□□□□ -1.7
LDHB-209ENST00000542765 F2RL2O00254 374 aa4.46□□□□□ -1.7
LDHB-209ENST00000542765 SLC16A6O15403 523 aa4.46□□□□□ -1.7
LDHB-209ENST00000542765 FTLP02792 175 aaPredicted RBP4.46□□□□□ -1.7
LDHB-209ENST00000542765 ALDH2P05091 517 aa4.46□□□□□ -1.7
LDHB-209ENST00000542765 MAP2K6P52564 334 aa4.46□□□□□ -1.7
LDHB-209ENST00000542765 HK3P52790 923 aa4.46□□□□□ -1.7
LDHB-209ENST00000542765 INHBEP58166 350 aa4.46□□□□□ -1.7
LDHB-209ENST00000542765 NOGQ13253 232 aa4.46□□□□□ -1.7
LDHB-209ENST00000542765 GRM3Q14832 879 aa4.46□□□□□ -1.7
LDHB-209ENST00000542765 LLGL1Q15334 1064 aa4.46□□□□□ -1.7
LDHB-209ENST00000542765 CCDC157Q569K6 752 aa4.46□□□□□ -1.7
LDHB-209ENST00000542765 THEMIS2Q5TEJ8 643 aa4.46□□□□□ -1.7
LDHB-209ENST00000542765 TSHZ3Q63HK5 1081 aa4.46□□□□□ -1.7
LDHB-209ENST00000542765 LRRC55Q6ZSA7 311 aa4.46□□□□□ -1.7
LDHB-209ENST00000542765 FITM2Q8N6M3 262 aa4.46□□□□□ -1.7
LDHB-209ENST00000542765 ZBTB34Q8NCN2 500 aa4.46□□□□□ -1.7
LDHB-209ENST00000542765 C3orf20Q8ND61 904 aa4.46□□□□□ -1.7
LDHB-209ENST00000542765 IL17RDQ8NFM7 739 aa4.46□□□□□ -1.7
LDHB-209ENST00000542765 NLGN4YQ8NFZ3 816 aaPredicted RBP4.46□□□□□ -1.7
LDHB-209ENST00000542765 TAAR9Q96RI9 348 aa4.46□□□□□ -1.7
LDHB-209ENST00000542765 ZSWIM1Q9BR11 485 aa4.46□□□□□ -1.7
LDHB-209ENST00000542765 AKIP1Q9NQ31 210 aa4.46□□□□□ -1.7
LDHB-209ENST00000542765 GEMIN8Q9NWZ8 242 aaKnown RBP4.46□□□□□ -1.7
LDHB-209ENST00000542765 C11orf21Q9P2W6 132 aa4.46□□□□□ -1.7
LDHB-209ENST00000542765 POLHQ9Y253 713 aa4.46□□□□□ -1.7
LDHB-209ENST00000542765 REXO2Q9Y3B8 237 aaKnown RBP4.46□□□□□ -1.7
LDHB-209ENST00000542765 PCDHA3Q9Y5H8 950 aa4.46□□□□□ -1.7
LDHB-209ENST00000542765 FRMPD2Q68DX3 1309 aaPredicted RBP4.46□□□□□ -1.7
LDHB-209ENST00000542765 AATKQ6ZMQ8 1374 aa4.45□□□□□ -1.7
LDHB-209ENST00000542765 GAGE12BA1L429 117 aa4.45□□□□□ -1.7
LDHB-209ENST00000542765 GRID2IPA4D2P6 1211 aa4.45□□□□□ -1.7
LDHB-209ENST00000542765 GAGE12HA6NDE8 117 aa4.45□□□□□ -1.7
LDHB-209ENST00000542765 MARCH11A6NNE9 402 aa4.45□□□□□ -1.7
LDHB-209ENST00000542765 RNASET2O00584 256 aaKnown RBP4.45□□□□□ -1.7
LDHB-209ENST00000542765 ELANEP08246 267 aa4.45□□□□□ -1.7
LDHB-209ENST00000542765 SPATA31D3P0C874 917 aa4.45□□□□□ -1.7
LDHB-209ENST00000542765 GNALP38405 381 aa4.45□□□□□ -1.7
LDHB-209ENST00000542765 TBX4P57082 545 aa4.45□□□□□ -1.7
LDHB-209ENST00000542765 NOMO3P69849 1222 aa4.45□□□□□ -1.7
LDHB-209ENST00000542765 OCA2Q04671 838 aa4.45□□□□□ -1.7
LDHB-209ENST00000542765 SLFN5Q08AF3 891 aa4.45□□□□□ -1.7
LDHB-209ENST00000542765 BEAN1Q3B7T3 259 aa4.45□□□□□ -1.7
LDHB-209ENST00000542765 NOMO2Q5JPE7 1267 aa4.45□□□□□ -1.7
LDHB-209ENST00000542765 KSR2Q6VAB6 950 aa4.45□□□□□ -1.7
LDHB-209ENST00000542765 SPATA31D4Q6ZUB0 917 aa4.45□□□□□ -1.7
LDHB-209ENST00000542765 ZNF365Q70YC5 407 aa4.45□□□□□ -1.7
LDHB-209ENST00000542765 HEATR3Q7Z4Q2 680 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 321.1 ms