RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 DENND4AQ7Z401 1863 aa16.78■□□□□ 0.28
ECHDC2-223ENST00000542552 SYN3O14994 580 aa16.77■□□□□ 0.28
ECHDC2-223ENST00000542552 TBC1D4O60343 1298 aa16.77■□□□□ 0.28
ECHDC2-223ENST00000542552 LDHAP00338 332 aaKnown RBP16.77■□□□□ 0.28
ECHDC2-223ENST00000542552 NFICP08651 508 aa16.77■□□□□ 0.28
ECHDC2-223ENST00000542552 SPATA31D3P0C874 917 aa16.77■□□□□ 0.28
ECHDC2-223ENST00000542552 SSTR3P32745 418 aaPredicted RBP16.77■□□□□ 0.28
ECHDC2-223ENST00000542552 SYKP43405 635 aa16.77■□□□□ 0.28
ECHDC2-223ENST00000542552 GUCY2FP51841 1108 aa16.77■□□□□ 0.28
ECHDC2-223ENST00000542552 RAB33AQ14088 237 aa16.77■□□□□ 0.28
ECHDC2-223ENST00000542552 TMEM132DQ14C87 1099 aa16.77■□□□□ 0.28
ECHDC2-223ENST00000542552 TMC5Q6UXY8 1006 aa16.77■□□□□ 0.28
ECHDC2-223ENST00000542552 C15orf39Q6ZRI6 1047 aa16.77■□□□□ 0.28
ECHDC2-223ENST00000542552 SPATA31D4Q6ZUB0 917 aa16.77■□□□□ 0.28
ECHDC2-223ENST00000542552 ANKS3Q6ZW76 656 aa16.77■□□□□ 0.28
ECHDC2-223ENST00000542552 GLYCTKQ8IVS8 523 aa16.77■□□□□ 0.28
ECHDC2-223ENST00000542552 SCFD1Q8WVM8 642 aa16.77■□□□□ 0.28
ECHDC2-223ENST00000542552 FAM212AQ96EL1 285 aa16.77■□□□□ 0.28
ECHDC2-223ENST00000542552 FAM213AQ9BRX8 229 aa16.77■□□□□ 0.28
ECHDC2-223ENST00000542552 GOLPH3LQ9H4A5 285 aa16.77■□□□□ 0.28
ECHDC2-223ENST00000542552 POMKQ9H5K3 350 aa16.77■□□□□ 0.28
ECHDC2-223ENST00000542552 NUB1Q9Y5A7 615 aa16.77■□□□□ 0.28
ECHDC2-223ENST00000542552 UBE4BO95155 1302 aa16.76■□□□□ 0.27
ECHDC2-223ENST00000542552 ANO9A1A5B4 782 aa16.76■□□□□ 0.27
ECHDC2-223ENST00000542552 M0QZQ0 153 aa16.76■□□□□ 0.27
ECHDC2-223ENST00000542552 PIRO00625 290 aa16.76■□□□□ 0.27
ECHDC2-223ENST00000542552 TGFB1I1O43294 461 aa16.76■□□□□ 0.27
ECHDC2-223ENST00000542552 EXTL3O43909 919 aa16.76■□□□□ 0.27
ECHDC2-223ENST00000542552 IL18RAPO95256 599 aa16.76■□□□□ 0.27
ECHDC2-223ENST00000542552 MYL1P05976 194 aa16.76■□□□□ 0.27
ECHDC2-223ENST00000542552 WEE2P0C1S8 567 aa16.76■□□□□ 0.27
ECHDC2-223ENST00000542552 OR1D2P34982 312 aa16.76■□□□□ 0.27
ECHDC2-223ENST00000542552 BMT2Q1RMZ1 405 aa16.76■□□□□ 0.27
ECHDC2-223ENST00000542552 ATAT1Q5SQI0 421 aa16.76■□□□□ 0.27
ECHDC2-223ENST00000542552 VARS2Q5ST30 1063 aaKnown RBP16.76■□□□□ 0.27
ECHDC2-223ENST00000542552 SLC8B1Q6J4K2 584 aa16.76■□□□□ 0.27
ECHDC2-223ENST00000542552 ELMSAN1Q6PJG2 1045 aa16.76■□□□□ 0.27
ECHDC2-223ENST00000542552 CYP26C1Q6V0L0 522 aa16.76■□□□□ 0.27
ECHDC2-223ENST00000542552 BRSK2Q8IWQ3 736 aa16.76■□□□□ 0.27
ECHDC2-223ENST00000542552 FSIP1Q8NA03 581 aa16.76■□□□□ 0.27
ECHDC2-223ENST00000542552 KREMEN2Q8NCW0 462 aa16.76■□□□□ 0.27
ECHDC2-223ENST00000542552 BEST2Q8NFU1 509 aa16.76■□□□□ 0.27
ECHDC2-223ENST00000542552 ZNF707Q96C28 371 aaPredicted RBP16.76■□□□□ 0.27
ECHDC2-223ENST00000542552 SAAL1Q96ER3 474 aa16.76■□□□□ 0.27
ECHDC2-223ENST00000542552 FBXW11Q9UKB1 542 aa16.76■□□□□ 0.27
ECHDC2-223ENST00000542552 PCDHB8Q9UN66 801 aa16.76■□□□□ 0.27
ECHDC2-223ENST00000542552 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.75■□□□□ 0.27
ECHDC2-223ENST00000542552 PI4K2BG5E9Z4 385 aa16.75■□□□□ 0.27
ECHDC2-223ENST00000542552 PPEF2O14830 753 aa16.75■□□□□ 0.27
ECHDC2-223ENST00000542552 KIAA0391O15091 583 aaKnown RBP16.75■□□□□ 0.27
ECHDC2-223ENST00000542552 RFPL2O75678 378 aa16.75■□□□□ 0.27
ECHDC2-223ENST00000542552 PAX3P23760 479 aa16.75■□□□□ 0.27
ECHDC2-223ENST00000542552 MCM4P33991 863 aa16.75■□□□□ 0.27
ECHDC2-223ENST00000542552 WNT7BP56706 349 aa16.75■□□□□ 0.27
ECHDC2-223ENST00000542552 LILRA4P59901 499 aa16.75■□□□□ 0.27
ECHDC2-223ENST00000542552 C9orf57Q5W0N0 161 aa16.75■□□□□ 0.27
ECHDC2-223ENST00000542552 ARMCX5Q6P1M9 558 aa16.75■□□□□ 0.27
ECHDC2-223ENST00000542552 NT5DC4Q86YG4 428 aa16.75■□□□□ 0.27
ECHDC2-223ENST00000542552 EFCAB13Q8IY85 973 aa16.75■□□□□ 0.27
ECHDC2-223ENST00000542552 RPGRIP1Q96KN7 1286 aa16.75■□□□□ 0.27
ECHDC2-223ENST00000542552 PCIF1Q9H4Z3 704 aa16.75■□□□□ 0.27
ECHDC2-223ENST00000542552 SLC39A2Q9NP94 309 aa16.75■□□□□ 0.27
ECHDC2-223ENST00000542552 ZDHHC7Q9NXF8 308 aa16.75■□□□□ 0.27
ECHDC2-223ENST00000542552 CDY1Q9Y6F8 540 aa16.75■□□□□ 0.27
ECHDC2-223ENST00000542552 SCN1AP35498 2009 aa16.75■□□□□ 0.27
ECHDC2-223ENST00000542552 CCDC195A0A1B0GUA6 201 aa16.74■□□□□ 0.27
ECHDC2-223ENST00000542552 SNRPFP62306 86 aaKnown RBP16.74■□□□□ 0.27
ECHDC2-223ENST00000542552 PSMD2Q13200 908 aa16.74■□□□□ 0.27
ECHDC2-223ENST00000542552 RNF135Q8IUD6 432 aa16.74■□□□□ 0.27
ECHDC2-223ENST00000542552 GPD1LQ8N335 351 aa16.74■□□□□ 0.27
ECHDC2-223ENST00000542552 APPL2Q8NEU8 664 aa16.74■□□□□ 0.27
ECHDC2-223ENST00000542552 EPHX3Q9H6B9 360 aa16.74■□□□□ 0.27
ECHDC2-223ENST00000542552 AGPAT3Q9NRZ7 376 aa16.74■□□□□ 0.27
ECHDC2-223ENST00000542552 DPP3Q9NY33 737 aa16.74■□□□□ 0.27
ECHDC2-223ENST00000542552 RBAKQ9NYW8 714 aaPredicted RBP16.74■□□□□ 0.27
ECHDC2-223ENST00000542552 GOLGA8IPA6NC78 632 aa16.73■□□□□ 0.27
ECHDC2-223ENST00000542552 GOLGA8JA6NMD2 632 aa16.73■□□□□ 0.27
ECHDC2-223ENST00000542552 H7C4K7 107 aa16.73■□□□□ 0.27
ECHDC2-223ENST00000542552 SPTLC1O15269 473 aa16.73■□□□□ 0.27
ECHDC2-223ENST00000542552 ZMYND10O75800 440 aa16.73■□□□□ 0.27
ECHDC2-223ENST00000542552 ABLIM3O94929 683 aa16.73■□□□□ 0.27
ECHDC2-223ENST00000542552 ZNF202O95125 648 aa16.73■□□□□ 0.27
ECHDC2-223ENST00000542552 OAZ2O95190 189 aa16.73■□□□□ 0.27
ECHDC2-223ENST00000542552 STK4Q13043 487 aa16.73■□□□□ 0.27
ECHDC2-223ENST00000542552 KMT5BQ4FZB7 885 aa16.73■□□□□ 0.27
ECHDC2-223ENST00000542552 KRBA2Q6ZNG9 492 aa16.73■□□□□ 0.27
ECHDC2-223ENST00000542552 PRKD2Q9BZL6 878 aa16.73■□□□□ 0.27
ECHDC2-223ENST00000542552 HSPBP1Q9NZL4 362 aa16.73■□□□□ 0.27
ECHDC2-223ENST00000542552 FBXL5Q9UKA1 691 aa16.73■□□□□ 0.27
ECHDC2-223ENST00000542552 USTQ9Y2C2 406 aa16.73■□□□□ 0.27
ECHDC2-223ENST00000542552 SPDYE4A6NLX3 237 aa16.72■□□□□ 0.27
ECHDC2-223ENST00000542552 HNRNPA1P09651 372 aaKnown RBP eCLIP16.72■□□□□ 0.27
ECHDC2-223ENST00000542552 HOXA9P31269 272 aa16.72■□□□□ 0.27
ECHDC2-223ENST00000542552 ROR1Q01973 937 aa16.72■□□□□ 0.27
ECHDC2-223ENST00000542552 DPYDQ12882 1025 aa16.72■□□□□ 0.27
ECHDC2-223ENST00000542552 KNOP1Q1ED39 458 aaKnown RBP16.72■□□□□ 0.27
ECHDC2-223ENST00000542552 UVSSAQ2YD98 709 aa16.72■□□□□ 0.27
ECHDC2-223ENST00000542552 RTL10Q7L3V2 364 aa16.72■□□□□ 0.27
ECHDC2-223ENST00000542552 NELFCDQ8IXH7 590 aa16.72■□□□□ 0.27
ECHDC2-223ENST00000542552 C12orf56Q8IXR9 622 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms