RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 RASGRF2O14827 1237 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 SPOPO43791 374 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 CTNND1O60716 968 aaKnown RBP5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 TCEA3O75764 348 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 ECEL1O95672 775 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 OAS1P00973 400 aaKnown RBP5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 GSTA1P08263 222 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 UNGP13051 313 aaPredicted RBP5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 ITIH2P19823 946 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 CNGA1P29973 690 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 PBX2P40425 430 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 SCTRP47872 440 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 SERPINB4P48594 390 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 PDE6CP51160 858 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 RTP1P59025 263 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 KRT76Q01546 638 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 CYP24A1Q07973 514 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 PTK6Q13882 451 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 PGM5Q15124 567 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 ZYXQ15942 572 aaKnown RBP5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 CNGA2Q16280 664 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 XRRA1Q6P2D8 792 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 RNF207Q6ZRF8 634 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 ANO5Q75V66 913 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 CPLX4Q7Z7G2 160 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 ZNF677Q86XU0 584 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 PPM1KQ8N3J5 372 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 PHTF2Q8N3S3 785 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 CCDC197Q8NCU1 140 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 MAGEC3Q8TD91 643 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 EPS8L3Q8TE67 593 aaKnown RBP5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 ZNF526Q8TF50 670 aaPredicted RBP5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 MAIP1Q8WWC4 291 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 BSNDQ8WZ55 320 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 DHX38Q92620 1227 aaKnown RBP5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 LPAR1Q92633 364 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 KIFAP3Q92845 792 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 BTBD6Q96KE9 485 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 FAM81BQ96LP2 452 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 NT5C1BQ96P26 610 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 SERPINB12Q96P63 405 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 TAAR1Q96RJ0 339 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 TMEM39BQ9GZU3 492 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 KIAA1683Q9H0B3 1180 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 PDLIM7Q9NR12 457 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 KLC4Q9NSK0 619 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 RAB20Q9NX57 234 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 PKD2L1Q9P0L9 805 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 NEU2Q9Y3R4 380 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 MROH7Q68CQ1 1323 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 MYPNQ86TC9 1320 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 ARID2Q68CP9 1835 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 GOLGA6L7A0A1B0GV03 622 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 DENND3A2RUS2 1198 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 H0YHG0 523 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 CHUKO15111 745 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 CLDN3O15551 220 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 ATP9AO75110 1047 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 CYP1A1P04798 512 aaPredicted RBP5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 MYBL1P10243 752 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 GARTP22102 1010 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 FGFR4P22455 802 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 MAN1A1P33908 653 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 SLC1A1P43005 524 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 KCNJ1P48048 391 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 GSCP56915 257 aaPredicted RBP5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 CAV1Q03135 178 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 CALCOCO2Q13137 446 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 KLF1Q13351 362 aaPredicted RBP5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 BRDTQ58F21 947 aaPredicted RBP5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 XKR9Q5GH70 373 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 SV2AQ7L0J3 742 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 EXOC3L1Q86VI1 746 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 RELL1Q8IUW5 271 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 CCDC105Q8IYK2 499 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 LRRC34Q8IZ02 419 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 MCOLN2Q8IZK6 566 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 FUKQ8N0W3 1084 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 CCDC127Q96BQ5 260 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 MRRFQ96E11 262 aaKnown RBP5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 SAAL1Q96ER3 474 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 SGSM3Q96HU1 749 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 CCDC114Q96M63 670 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 POP1Q99575 1024 aaKnown RBP5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 USB1Q9BQ65 265 aaKnown RBP5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 OCSTAMPQ9BR26 566 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 PDCD2LQ9BRP1 358 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 HERPUD2Q9BSE4 406 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 PLVAPQ9BX97 442 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 MOV10L1Q9BXT6 1211 aaKnown RBP5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 ZNF341Q9BYN7 854 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 CDC42EP4Q9H3Q1 356 aaKnown RBP5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 KMT5AQ9NQR1 393 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 PXMP2Q9NR77 195 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 TOPORSQ9NS56 1045 aaPredicted RBP5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 GINM1Q9NU53 330 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 INTS9Q9NV88 658 aaKnown RBP5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 SLC12A4Q9UP95 1085 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 STYXL1Q9Y6J8 313 aa5.54□□□□□ -1.52
ATPAF1-212ENST00000542495 CEP350Q5VT06 3117 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms