RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 ADAM33Q9BZ11 813 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 SLCO1B3Q9NPD5 702 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 PDGFCQ9NRA1 345 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 HOMER3Q9NSC5 361 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 ETAA1Q9NY74 926 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 MTRF1LQ9UGC7 380 aaKnown RBP9.72□□□□□ -0.85
THBS3-211ENST00000541990 CPA4Q9UI42 421 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 RASAL2Q9UJF2 1139 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 INTUQ9ULD6 942 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 DICER1Q9UPY3 1922 aaKnown RBP9.72□□□□□ -0.85
THBS3-211ENST00000541990 TISP43B9A030 160 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 PDHXO00330 501 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 DHX15O43143 795 aaKnown RBP9.72□□□□□ -0.85
THBS3-211ENST00000541990 TGFB1I1O43294 461 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 ENTPD5O75356 428 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 GCNT3O95395 438 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 CBX6O95503 412 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 TPBGLP0DKB5 382 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 COMTP21964 271 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 CTNNA2P26232 953 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 EPHB2P29323 1055 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 VPS41P49754 854 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 DRG2P55039 364 aaKnown RBP9.72□□□□□ -0.85
THBS3-211ENST00000541990 ORC2Q13416 577 aaPredicted RBP9.72□□□□□ -0.85
THBS3-211ENST00000541990 MESDQ14696 234 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 LY6KQ17RY6 165 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 ARMC3Q5W041 872 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 CYFIP1Q7L576 1253 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 EPM2AIP1Q7L775 607 aaPredicted RBP9.72□□□□□ -0.85
THBS3-211ENST00000541990 ATG4AQ8WYN0 398 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 RPS6KC1Q96S38 1066 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 PAIP2Q9BPZ3 127 aaKnown RBP9.72□□□□□ -0.85
THBS3-211ENST00000541990 LXNQ9BS40 222 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 KIFC3Q9BVG8 833 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 ACAD9Q9H845 621 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 CTTNBP2NLQ9P2B4 639 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 CHKBQ9Y259 395 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 NUMBLQ9Y6R0 609 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 ZMYM2Q9UBW7 1377 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 SOWAHBA6NEL2 793 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 PLA2G6O60733 806 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 TAC1P20366 129 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 CHRNA3P32297 505 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 CIITAP33076 1130 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 COILP38432 576 aaPredicted RBP9.72□□□□□ -0.85
THBS3-211ENST00000541990 CCNG1P51959 295 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 PPP4R3CPQ6ZMV5 832 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 TRIM50Q86XT4 487 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 ZNF784Q8NCA9 323 aaPredicted RBP9.72□□□□□ -0.85
THBS3-211ENST00000541990 ZC3H15Q8WU90 426 aaKnown RBP9.72□□□□□ -0.85
THBS3-211ENST00000541990 BORCS6Q96GS4 357 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 FAM84AQ96KN4 292 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 IFT74Q96LB3 600 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 C12orf42Q96LP6 360 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 MBOAT7Q96N66 472 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 ZSWIM1Q9BR11 485 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 HERPUD2Q9BSE4 406 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 RNPEPL1Q9HAU8 725 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 PCYOX1Q9UHG3 505 aa9.72□□□□□ -0.85
THBS3-211ENST00000541990 ANKRD33BA6NCL7 494 aa9.71□□□□□ -0.85
THBS3-211ENST00000541990 FOXN3O00409 490 aaPredicted RBP9.71□□□□□ -0.85
THBS3-211ENST00000541990 MARK3P27448 753 aa9.71□□□□□ -0.85
THBS3-211ENST00000541990 NMT1P30419 496 aaKnown RBP9.71□□□□□ -0.85
THBS3-211ENST00000541990 STX2P32856 288 aa9.71□□□□□ -0.85
THBS3-211ENST00000541990 PCK1P35558 622 aa9.71□□□□□ -0.85
THBS3-211ENST00000541990 SESN3P58005 492 aa9.71□□□□□ -0.85
THBS3-211ENST00000541990 SLMAPQ14BN4 828 aa9.71□□□□□ -0.85
THBS3-211ENST00000541990 LDLRAD1Q5T700 205 aa9.71□□□□□ -0.85
THBS3-211ENST00000541990 RNF220Q5VTB9 566 aa9.71□□□□□ -0.85
THBS3-211ENST00000541990 MIER3Q7Z3K6 550 aa9.71□□□□□ -0.85
THBS3-211ENST00000541990 FBXO16Q8IX29 292 aaPredicted RBP9.71□□□□□ -0.85
THBS3-211ENST00000541990 MS4A4AQ96JQ5 239 aa9.71□□□□□ -0.85
THBS3-211ENST00000541990 FAM118BQ9BPY3 351 aa9.71□□□□□ -0.85
THBS3-211ENST00000541990 PLCD4Q9BRC7 762 aa9.71□□□□□ -0.85
THBS3-211ENST00000541990 AGO4Q9HCK5 861 aaKnown RBP9.71□□□□□ -0.85
THBS3-211ENST00000541990 ADAMTS5Q9UNA0 930 aa9.71□□□□□ -0.85
THBS3-211ENST00000541990 LIN7AO14910 233 aaPredicted RBP9.71□□□□□ -0.86
THBS3-211ENST00000541990 HIP1RO75146 1068 aa9.71□□□□□ -0.86
THBS3-211ENST00000541990 SPAG7O75391 227 aa9.71□□□□□ -0.86
THBS3-211ENST00000541990 PECAM1P16284 738 aaPredicted RBP9.71□□□□□ -0.86
THBS3-211ENST00000541990 RFC5P40937 340 aa9.71□□□□□ -0.86
THBS3-211ENST00000541990 PEX5P50542 639 aa9.71□□□□□ -0.86
THBS3-211ENST00000541990 WDR4P57081 412 aaKnown RBP9.71□□□□□ -0.86
THBS3-211ENST00000541990 DNAJC3Q13217 504 aa9.71□□□□□ -0.86
THBS3-211ENST00000541990 SH3D19Q5HYK7 790 aa9.71□□□□□ -0.86
THBS3-211ENST00000541990 RFWD3Q6PCD5 774 aa9.71□□□□□ -0.86
THBS3-211ENST00000541990 FAM43BQ6ZT52 329 aaPredicted RBP9.71□□□□□ -0.86
THBS3-211ENST00000541990 LONP2Q86WA8 852 aa9.71□□□□□ -0.86
THBS3-211ENST00000541990 MCF2L2Q86YR7 1114 aa9.71□□□□□ -0.86
THBS3-211ENST00000541990 SLFN12Q8IYM2 578 aa9.71□□□□□ -0.86
THBS3-211ENST00000541990 KAT5Q92993 513 aa9.71□□□□□ -0.86
THBS3-211ENST00000541990 ELMO3Q96BJ8 720 aa9.71□□□□□ -0.86
THBS3-211ENST00000541990 HSD17B14Q9BPX1 270 aa9.71□□□□□ -0.86
THBS3-211ENST00000541990 NT5C3AQ9H0P0 336 aa9.71□□□□□ -0.86
THBS3-211ENST00000541990 KLHL14Q9P2G3 628 aa9.71□□□□□ -0.86
THBS3-211ENST00000541990 SYNPO2Q9UMS6 1093 aa9.71□□□□□ -0.86
THBS3-211ENST00000541990 AGTPBP1Q9UPW5 1226 aa9.71□□□□□ -0.86
THBS3-211ENST00000541990 KDM3AQ9Y4C1 1321 aa9.71□□□□□ -0.86
THBS3-211ENST00000541990 SMAPO00193 183 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 O00370 1275 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms