RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 CYP39A1Q9NYL5 469 aa16.08■□□□□ 0.17
HMGA2-210ENST00000541363 V9GYQ6 96 aa16.08■□□□□ 0.17
HMGA2-210ENST00000541363 PFASO15067 1338 aa16.08■□□□□ 0.17
HMGA2-210ENST00000541363 NR3C1P04150 777 aa16.08■□□□□ 0.16
HMGA2-210ENST00000541363 IL12RB1P42701 662 aa16.08■□□□□ 0.16
HMGA2-210ENST00000541363 GPR1P46091 355 aa16.08■□□□□ 0.16
HMGA2-210ENST00000541363 ZNF618Q5T7W0 954 aa16.08■□□□□ 0.16
HMGA2-210ENST00000541363 UNC13DQ70J99 1090 aa16.08■□□□□ 0.16
HMGA2-210ENST00000541363 STX12Q86Y82 276 aa16.08■□□□□ 0.16
HMGA2-210ENST00000541363 ATPAF2Q8N5M1 289 aa16.08■□□□□ 0.16
HMGA2-210ENST00000541363 KCTD17Q8N5Z5 321 aa16.08■□□□□ 0.16
HMGA2-210ENST00000541363 MUC3BQ9H195 1237 aa16.08■□□□□ 0.16
HMGA2-210ENST00000541363 PARD3Q8TEW0 1356 aa16.08■□□□□ 0.16
HMGA2-210ENST00000541363 FGFR4P22455 802 aa16.08■□□□□ 0.16
HMGA2-210ENST00000541363 MRPS35P82673 323 aaKnown RBP16.08■□□□□ 0.16
HMGA2-210ENST00000541363 USP10Q14694 798 aaKnown RBP16.08■□□□□ 0.16
HMGA2-210ENST00000541363 PDZK1Q5T2W1 519 aa16.08■□□□□ 0.16
HMGA2-210ENST00000541363 RNFT2Q96EX2 444 aa16.08■□□□□ 0.16
HMGA2-210ENST00000541363 IL1RAPL1Q9NZN1 696 aa16.08■□□□□ 0.16
HMGA2-210ENST00000541363 FHOD1Q9Y613 1164 aa16.08■□□□□ 0.16
HMGA2-210ENST00000541363 LOC102724159A0A0B4J2E5 919 aa16.08■□□□□ 0.16
HMGA2-210ENST00000541363 FTLP02792 175 aaPredicted RBP16.08■□□□□ 0.16
HMGA2-210ENST00000541363 PWP2Q15269 919 aaKnown RBP16.08■□□□□ 0.16
HMGA2-210ENST00000541363 LCORLQ8N3X6 602 aa16.08■□□□□ 0.16
HMGA2-210ENST00000541363 ADI1Q9BV57 179 aa16.08■□□□□ 0.16
HMGA2-210ENST00000541363 RERGLQ9H628 205 aa16.08■□□□□ 0.16
HMGA2-210ENST00000541363 TMCC3Q9ULS5 477 aa16.08■□□□□ 0.16
HMGA2-210ENST00000541363 SLC30A1Q9Y6M5 507 aa16.08■□□□□ 0.16
HMGA2-210ENST00000541363 NUP160Q12769 1436 aa16.08■□□□□ 0.16
HMGA2-210ENST00000541363 UHRF1BP1Q6BDS2 1440 aa16.08■□□□□ 0.16
HMGA2-210ENST00000541363 CSNK2BP67870 215 aa16.08■□□□□ 0.16
HMGA2-210ENST00000541363 P3H1Q32P28 736 aa16.08■□□□□ 0.16
HMGA2-210ENST00000541363 SH3GLB2Q9NR46 395 aa16.08■□□□□ 0.16
HMGA2-210ENST00000541363 PI4KBQ9UBF8 816 aa16.08■□□□□ 0.16
HMGA2-210ENST00000541363 DMPKQ09013 629 aa16.08■□□□□ 0.16
HMGA2-210ENST00000541363 SGO1Q5FBB7 561 aa16.08■□□□□ 0.16
HMGA2-210ENST00000541363 TTC39BQ5VTQ0 682 aaPredicted RBP16.08■□□□□ 0.16
HMGA2-210ENST00000541363 SNRNP27Q8WVK2 155 aaKnown RBP16.08■□□□□ 0.16
HMGA2-210ENST00000541363 FOXP3Q9BZS1 431 aa16.08■□□□□ 0.16
HMGA2-210ENST00000541363 YEATS2Q9ULM3 1422 aa16.07■□□□□ 0.16
HMGA2-210ENST00000541363 MZF1P28698 734 aaPredicted RBP16.07■□□□□ 0.16
HMGA2-210ENST00000541363 PURAQ00577 322 aaKnown RBP16.07■□□□□ 0.16
HMGA2-210ENST00000541363 ZNF211Q13398 564 aaPredicted RBP16.07■□□□□ 0.16
HMGA2-210ENST00000541363 UGT3A1Q6NUS8 523 aa16.07■□□□□ 0.16
HMGA2-210ENST00000541363 NLRP10Q86W26 655 aa16.07■□□□□ 0.16
HMGA2-210ENST00000541363 SPATA2LQ8IUW3 424 aaPredicted RBP16.07■□□□□ 0.16
HMGA2-210ENST00000541363 DUOX2Q9NRD8 1548 aa16.07■□□□□ 0.16
HMGA2-210ENST00000541363 UBTFL6P0CB48 400 aaPredicted RBP16.07■□□□□ 0.16
HMGA2-210ENST00000541363 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.07■□□□□ 0.16
HMGA2-210ENST00000541363 ZNF786Q8N393 782 aa16.07■□□□□ 0.16
HMGA2-210ENST00000541363 COPRSQ9NQ92 184 aa16.07■□□□□ 0.16
HMGA2-210ENST00000541363 HOXA13P31271 388 aaPredicted RBP16.07■□□□□ 0.16
HMGA2-210ENST00000541363 GCLMP48507 274 aa16.07■□□□□ 0.16
HMGA2-210ENST00000541363 PRELPP51888 382 aa16.07■□□□□ 0.16
HMGA2-210ENST00000541363 PUDPQ08623 228 aa16.07■□□□□ 0.16
HMGA2-210ENST00000541363 KLHL12Q53G59 568 aa16.07■□□□□ 0.16
HMGA2-210ENST00000541363 UNC45BQ8IWX7 931 aa16.07■□□□□ 0.16
HMGA2-210ENST00000541363 CENPLQ8N0S6 344 aaPredicted RBP16.07■□□□□ 0.16
HMGA2-210ENST00000541363 CYP4Z2PQ8N1L4 340 aa16.07■□□□□ 0.16
HMGA2-210ENST00000541363 CAAP1Q9H8G2 361 aa16.07■□□□□ 0.16
HMGA2-210ENST00000541363 CDY2AQ9Y6F7 541 aa16.07■□□□□ 0.16
HMGA2-210ENST00000541363 CDY1Q9Y6F8 540 aa16.07■□□□□ 0.16
HMGA2-210ENST00000541363 ANO9A1A5B4 782 aa16.07■□□□□ 0.16
HMGA2-210ENST00000541363 NFICP08651 508 aa16.07■□□□□ 0.16
HMGA2-210ENST00000541363 EIF2AK2P19525 551 aaKnown RBP16.07■□□□□ 0.16
HMGA2-210ENST00000541363 GUCY1A2P33402 732 aa16.07■□□□□ 0.16
HMGA2-210ENST00000541363 ERFP50548 548 aa16.07■□□□□ 0.16
HMGA2-210ENST00000541363 XPO7Q9UIA9 1087 aaKnown RBP16.07■□□□□ 0.16
HMGA2-210ENST00000541363 CHMP2BQ9UQN3 213 aa16.07■□□□□ 0.16
HMGA2-210ENST00000541363 ERVV-2B6SEH9 535 aa16.07■□□□□ 0.16
HMGA2-210ENST00000541363 CCT8P50990 548 aa16.07■□□□□ 0.16
HMGA2-210ENST00000541363 BTKQ06187 659 aa16.07■□□□□ 0.16
HMGA2-210ENST00000541363 SLC10A4Q96EP9 437 aa16.07■□□□□ 0.16
HMGA2-210ENST00000541363 ZNF496Q96IT1 587 aaPredicted RBP16.07■□□□□ 0.16
HMGA2-210ENST00000541363 PHACTR1Q9C0D0 580 aa16.07■□□□□ 0.16
HMGA2-210ENST00000541363 KLHL20Q9Y2M5 609 aa16.07■□□□□ 0.16
HMGA2-210ENST00000541363 PIGOQ8TEQ8 1089 aa16.07■□□□□ 0.16
HMGA2-210ENST00000541363 JADE3Q92613 823 aa16.07■□□□□ 0.16
HMGA2-210ENST00000541363 USP15Q9Y4E8 981 aaPredicted RBP16.07■□□□□ 0.16
HMGA2-210ENST00000541363 PRPF3O43395 683 aaKnown RBP16.06■□□□□ 0.16
HMGA2-210ENST00000541363 IL6P05231 212 aa16.06■□□□□ 0.16
HMGA2-210ENST00000541363 KPNB1Q14974 876 aaKnown RBP16.06■□□□□ 0.16
HMGA2-210ENST00000541363 FOSL2P15408 326 aa16.06■□□□□ 0.16
HMGA2-210ENST00000541363 RSBN1Q5VWQ0 802 aaPredicted RBP16.06■□□□□ 0.16
HMGA2-210ENST00000541363 KRT35Q92764 455 aa16.06■□□□□ 0.16
HMGA2-210ENST00000541363 REXO4Q9GZR2 422 aaKnown RBP16.06■□□□□ 0.16
HMGA2-210ENST00000541363 BHMT2Q9H2M3 363 aa16.06■□□□□ 0.16
HMGA2-210ENST00000541363 FAM217BQ9NTX9 383 aaPredicted RBP16.06■□□□□ 0.16
HMGA2-210ENST00000541363 STX4Q12846 297 aa16.06■□□□□ 0.16
HMGA2-210ENST00000541363 ADRM1Q16186 407 aa16.06■□□□□ 0.16
HMGA2-210ENST00000541363 PCDHGA4Q9Y5G9 962 aa16.06■□□□□ 0.16
HMGA2-210ENST00000541363 APRTP07741 180 aa16.06■□□□□ 0.16
HMGA2-210ENST00000541363 CCDC130P13994 396 aa16.06■□□□□ 0.16
HMGA2-210ENST00000541363 HPGDP15428 266 aa16.06■□□□□ 0.16
HMGA2-210ENST00000541363 SLC1A1P43005 524 aa16.06■□□□□ 0.16
HMGA2-210ENST00000541363 SESN2P58004 480 aaPredicted RBP16.06■□□□□ 0.16
HMGA2-210ENST00000541363 DNAJC10Q8IXB1 793 aa16.06■□□□□ 0.16
HMGA2-210ENST00000541363 RCOR2Q8IZ40 523 aa16.06■□□□□ 0.16
HMGA2-210ENST00000541363 PPP2R3CQ969Q6 453 aa16.06■□□□□ 0.16
HMGA2-210ENST00000541363 HERC5Q9UII4 1024 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms