RNA–Protein interactions for RNA: ENST00000541099.5

TRIT1-215, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene TRIT1, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-215ENST00000541099 TKTP29401 623 aaKnown RBP12.66□□□□□ -0.38
TRIT1-215ENST00000541099 NRIP1P48552 1158 aa12.66□□□□□ -0.38
TRIT1-215ENST00000541099 TFAMQ00059 246 aaKnown RBP12.66□□□□□ -0.38
TRIT1-215ENST00000541099 SMC1AQ14683 1233 aaKnown RBP12.66□□□□□ -0.38
TRIT1-215ENST00000541099 PRSS55Q6UWB4 352 aaPredicted RBP12.66□□□□□ -0.38
TRIT1-215ENST00000541099 BEST2Q8NFU1 509 aa12.66□□□□□ -0.38
TRIT1-215ENST00000541099 GOLGA5Q8TBA6 731 aa12.66□□□□□ -0.38
TRIT1-215ENST00000541099 LNX1Q8TBB1 728 aaPredicted RBP12.66□□□□□ -0.38
TRIT1-215ENST00000541099 KLHL5Q96PQ7 755 aa12.66□□□□□ -0.38
TRIT1-215ENST00000541099 TSPAN18Q96SJ8 248 aa12.66□□□□□ -0.38
TRIT1-215ENST00000541099 IGFLR1Q9H665 355 aa12.66□□□□□ -0.38
TRIT1-215ENST00000541099 RXFP1Q9HBX9 757 aa12.66□□□□□ -0.38
TRIT1-215ENST00000541099 INTS13Q9NVM9 706 aa12.66□□□□□ -0.38
TRIT1-215ENST00000541099 DPP3Q9NY33 737 aa12.66□□□□□ -0.38
TRIT1-215ENST00000541099 HOOK1Q9UJC3 728 aaKnown RBP12.66□□□□□ -0.38
TRIT1-215ENST00000541099 VWA8A3KMH1 1905 aa12.66□□□□□ -0.38
TRIT1-215ENST00000541099 UNC80Q8N2C7 3258 aa12.65□□□□□ -0.38
TRIT1-215ENST00000541099 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.65□□□□□ -0.38
TRIT1-215ENST00000541099 CARNS1A5YM72 827 aa12.65□□□□□ -0.38
TRIT1-215ENST00000541099 LRRIQ3A6PVS8 624 aaPredicted RBP12.65□□□□□ -0.38
TRIT1-215ENST00000541099 TEX28O15482 410 aa12.65□□□□□ -0.38
TRIT1-215ENST00000541099 CALUO43852 315 aaPredicted RBP12.65□□□□□ -0.38
TRIT1-215ENST00000541099 NR2F2P24468 414 aa12.65□□□□□ -0.38
TRIT1-215ENST00000541099 GLUD2P49448 558 aa12.65□□□□□ -0.38
TRIT1-215ENST00000541099 LILRA4P59901 499 aa12.65□□□□□ -0.38
TRIT1-215ENST00000541099 MCCD1P59942 119 aaPredicted RBP12.65□□□□□ -0.38
TRIT1-215ENST00000541099 CLDN10P78369 228 aa12.65□□□□□ -0.38
TRIT1-215ENST00000541099 TFF2Q03403 129 aa12.65□□□□□ -0.38
TRIT1-215ENST00000541099 ADAM15Q13444 863 aa12.65□□□□□ -0.38
TRIT1-215ENST00000541099 MRPL58Q14197 206 aaKnown RBP12.65□□□□□ -0.38
TRIT1-215ENST00000541099 MYBPC2Q14324 1141 aa12.65□□□□□ -0.38
TRIT1-215ENST00000541099 CEP135Q66GS9 1140 aa12.65□□□□□ -0.38
TRIT1-215ENST00000541099 TTI2Q6NXR4 508 aa12.65□□□□□ -0.38
TRIT1-215ENST00000541099 RBM43Q6ZSC3 357 aaKnown RBP12.65□□□□□ -0.38
TRIT1-215ENST00000541099 PARD3BQ8TEW8 1205 aa12.65□□□□□ -0.38
TRIT1-215ENST00000541099 SLC22A17Q8WUG5 538 aa12.65□□□□□ -0.38
TRIT1-215ENST00000541099 RIN2Q8WYP3 895 aaPredicted RBP12.65□□□□□ -0.38
TRIT1-215ENST00000541099 ELMO3Q96BJ8 720 aa12.65□□□□□ -0.38
TRIT1-215ENST00000541099 CCDC127Q96BQ5 260 aa12.65□□□□□ -0.38
TRIT1-215ENST00000541099 SUSD3Q96L08 255 aa12.65□□□□□ -0.38
TRIT1-215ENST00000541099 CGRRF1Q99675 332 aa12.65□□□□□ -0.38
TRIT1-215ENST00000541099 NUP62CLQ9H1M0 184 aa12.65□□□□□ -0.38
TRIT1-215ENST00000541099 TLE6Q9H808 572 aa12.65□□□□□ -0.38
TRIT1-215ENST00000541099 KIAA1586Q9HCI6 787 aa12.65□□□□□ -0.38
TRIT1-215ENST00000541099 CLEC1BQ9P126 229 aa12.65□□□□□ -0.38
TRIT1-215ENST00000541099 TIMM13Q9Y5L4 95 aaPredicted RBP12.65□□□□□ -0.38
TRIT1-215ENST00000541099 VCANP13611 3396 aa12.64□□□□□ -0.39
TRIT1-215ENST00000541099 SF3B1O75533 1304 aaKnown RBP eCLIP12.64□□□□□ -0.397e-7■■■■□ 20.8
TRIT1-215ENST00000541099 SCN1AP35498 2009 aa12.64□□□□□ -0.39
TRIT1-215ENST00000541099 M0QZQ0 153 aa12.64□□□□□ -0.39
TRIT1-215ENST00000541099 TBC1D4O60343 1298 aa12.64□□□□□ -0.39
TRIT1-215ENST00000541099 CST3P01034 146 aaPredicted RBP12.64□□□□□ -0.39
TRIT1-215ENST00000541099 C4BPAP04003 597 aaKnown RBP12.64□□□□□ -0.39
TRIT1-215ENST00000541099 ITGB3P05106 788 aa12.64□□□□□ -0.39
TRIT1-215ENST00000541099 DLATP10515 647 aaKnown RBP12.64□□□□□ -0.39
TRIT1-215ENST00000541099 EPCAMP16422 314 aa12.64□□□□□ -0.39
TRIT1-215ENST00000541099 CCNE1P24864 410 aa12.64□□□□□ -0.39
TRIT1-215ENST00000541099 POLR2BP30876 1174 aaKnown RBP12.64□□□□□ -0.39
TRIT1-215ENST00000541099 STX17P56962 302 aa12.64□□□□□ -0.39
TRIT1-215ENST00000541099 ADAM9Q13443 819 aa12.64□□□□□ -0.39
TRIT1-215ENST00000541099 EDRF1Q3B7T1 1238 aa12.64□□□□□ -0.39
TRIT1-215ENST00000541099 USP41Q3LFD5 358 aa12.64□□□□□ -0.39
TRIT1-215ENST00000541099 KLHL10Q6JEL2 608 aa12.64□□□□□ -0.39
TRIT1-215ENST00000541099 PDE12Q6L8Q7 609 aaKnown RBP12.64□□□□□ -0.39
TRIT1-215ENST00000541099 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.64□□□□□ -0.39
TRIT1-215ENST00000541099 NT5DC4Q86YG4 428 aa12.64□□□□□ -0.39
TRIT1-215ENST00000541099 PIP4P2Q8N4L2 257 aa12.64□□□□□ -0.39
TRIT1-215ENST00000541099 EFHBQ8N7U6 833 aa12.64□□□□□ -0.39
TRIT1-215ENST00000541099 NELFBQ8WX92 580 aa12.64□□□□□ -0.39
TRIT1-215ENST00000541099 PIK3R5Q8WYR1 880 aa12.64□□□□□ -0.39
TRIT1-215ENST00000541099 PABPC5Q96DU9 382 aaKnown RBP12.64□□□□□ -0.39
TRIT1-215ENST00000541099 CLSTN3Q9BQT9 956 aa12.64□□□□□ -0.39
TRIT1-215ENST00000541099 TTPALQ9BTX7 342 aa12.64□□□□□ -0.39
TRIT1-215ENST00000541099 TMEM63CQ9P1W3 806 aa12.64□□□□□ -0.39
TRIT1-215ENST00000541099 BARX2Q9UMQ3 279 aaPredicted RBP12.64□□□□□ -0.39
TRIT1-215ENST00000541099 CTNND2Q9UQB3 1225 aa12.64□□□□□ -0.39
TRIT1-215ENST00000541099 TULP1O00294 542 aaPredicted RBP12.63□□□□□ -0.39
TRIT1-215ENST00000541099 LRRN2O75325 713 aa12.63□□□□□ -0.39
TRIT1-215ENST00000541099 KIF20AO95235 890 aa12.63□□□□□ -0.39
TRIT1-215ENST00000541099 VNN1O95497 513 aa12.63□□□□□ -0.39
TRIT1-215ENST00000541099 URODP06132 367 aa12.63□□□□□ -0.39
TRIT1-215ENST00000541099 TRIM49P0CI25 452 aa12.63□□□□□ -0.39
TRIT1-215ENST00000541099 TRIM49CP0CI26 452 aa12.63□□□□□ -0.39
TRIT1-215ENST00000541099 PPP3CAQ08209 521 aa12.63□□□□□ -0.39
TRIT1-215ENST00000541099 SKIV2LQ15477 1246 aaKnown RBP12.63□□□□□ -0.39
TRIT1-215ENST00000541099 DPCR1Q3MIW9 517 aa12.63□□□□□ -0.39
TRIT1-215ENST00000541099 VARS2Q5ST30 1063 aaKnown RBP12.63□□□□□ -0.39
TRIT1-215ENST00000541099 TDRD10Q5VZ19 366 aaKnown RBP12.63□□□□□ -0.39
TRIT1-215ENST00000541099 LLGL2Q6P1M3 1020 aa12.63□□□□□ -0.39
TRIT1-215ENST00000541099 C15orf39Q6ZRI6 1047 aa12.63□□□□□ -0.39
TRIT1-215ENST00000541099 TRAPPC11Q7Z392 1133 aa12.63□□□□□ -0.39
TRIT1-215ENST00000541099 CEP57Q86XR8 500 aa12.63□□□□□ -0.39
TRIT1-215ENST00000541099 WDR49Q8IV35 697 aa12.63□□□□□ -0.39
TRIT1-215ENST00000541099 CSGALNACT2Q8N6G5 542 aa12.63□□□□□ -0.39
TRIT1-215ENST00000541099 TRIML1Q8N9V2 468 aa12.63□□□□□ -0.39
TRIT1-215ENST00000541099 DHTKD1Q96HY7 919 aaPredicted RBP12.63□□□□□ -0.39
TRIT1-215ENST00000541099 MSLNLQ96KJ4 702 aa12.63□□□□□ -0.39
TRIT1-215ENST00000541099 SENP8Q96LD8 212 aa12.63□□□□□ -0.39
TRIT1-215ENST00000541099 RTP3Q9BQQ7 232 aa12.63□□□□□ -0.39
TRIT1-215ENST00000541099 UBE2ZQ9H832 354 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms