RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 CRELD2Q6UXH1 353 aaPredicted RBP11□□□□□ -0.65
CDC42SE1-207ENST00000540998 MCOLN2Q8IZK6 566 aa11□□□□□ -0.65
CDC42SE1-207ENST00000540998 TMEM130Q8N3G9 435 aa11□□□□□ -0.65
CDC42SE1-207ENST00000540998 C12orf50Q8NA57 414 aaPredicted RBP11□□□□□ -0.65
CDC42SE1-207ENST00000540998 C7orf43Q8WVR3 580 aa11□□□□□ -0.65
CDC42SE1-207ENST00000540998 ZNF516Q92618 1163 aa11□□□□□ -0.65
CDC42SE1-207ENST00000540998 NT5C1BQ96P26 610 aa11□□□□□ -0.65
CDC42SE1-207ENST00000540998 KIAA1586Q9HCI6 787 aa11□□□□□ -0.65
CDC42SE1-207ENST00000540998 NPHS2Q9NP85 383 aa11□□□□□ -0.65
CDC42SE1-207ENST00000540998 RGL2O15211 777 aa11□□□□□ -0.65
CDC42SE1-207ENST00000540998 SLC26A4O43511 780 aa11□□□□□ -0.65
CDC42SE1-207ENST00000540998 GGPS1O95749 300 aa11□□□□□ -0.65
CDC42SE1-207ENST00000540998 T-ENOLP0DO92 83 aa11□□□□□ -0.65
CDC42SE1-207ENST00000540998 PECAM1P16284 738 aaPredicted RBP11□□□□□ -0.65
CDC42SE1-207ENST00000540998 ACOT2P49753 483 aa11□□□□□ -0.65
CDC42SE1-207ENST00000540998 MRPS9P82933 396 aaKnown RBP11□□□□□ -0.65
CDC42SE1-207ENST00000540998 LACTBP83111 547 aaPredicted RBP11□□□□□ -0.65
CDC42SE1-207ENST00000540998 VPS72Q15906 364 aa11□□□□□ -0.65
CDC42SE1-207ENST00000540998 PLEKHG4Q58EX7 1191 aa11□□□□□ -0.65
CDC42SE1-207ENST00000540998 ZBTB41Q5SVQ8 909 aa11□□□□□ -0.65
CDC42SE1-207ENST00000540998 KRT39Q6A163 491 aa11□□□□□ -0.65
CDC42SE1-207ENST00000540998 B3GNT9Q6UX72 402 aa11□□□□□ -0.65
CDC42SE1-207ENST00000540998 MXRA8Q9BRK3 442 aa11□□□□□ -0.65
CDC42SE1-207ENST00000540998 ASTN2O75129 1339 aaPredicted RBP11□□□□□ -0.65
CDC42SE1-207ENST00000540998 MTA2O94776 668 aa11□□□□□ -0.65
CDC42SE1-207ENST00000540998 GAS8O95995 478 aa11□□□□□ -0.65
CDC42SE1-207ENST00000540998 NPTX2P47972 431 aa11□□□□□ -0.65
CDC42SE1-207ENST00000540998 RAD23BP54727 409 aa11□□□□□ -0.65
CDC42SE1-207ENST00000540998 ZNF394Q53GI3 561 aa11□□□□□ -0.65
CDC42SE1-207ENST00000540998 LONP2Q86WA8 852 aa11□□□□□ -0.65
CDC42SE1-207ENST00000540998 FAM13CQ8NE31 585 aa11□□□□□ -0.65
CDC42SE1-207ENST00000540998 FBXL13Q8NEE6 735 aa11□□□□□ -0.65
CDC42SE1-207ENST00000540998 MAGEB18Q96M61 343 aa11□□□□□ -0.65
CDC42SE1-207ENST00000540998 TRAIPQ9BWF2 469 aa11□□□□□ -0.65
CDC42SE1-207ENST00000540998 OSBPL8Q9BZF1 889 aa11□□□□□ -0.65
CDC42SE1-207ENST00000540998 LTBP1Q14766 1721 aa10.99□□□□□ -0.65
CDC42SE1-207ENST00000540998 MYPNQ86TC9 1320 aa10.99□□□□□ -0.65
CDC42SE1-207ENST00000540998 FAM47DPA6NHR8 397 aa10.99□□□□□ -0.65
CDC42SE1-207ENST00000540998 KIF1CO43896 1103 aaKnown RBP10.99□□□□□ -0.65
CDC42SE1-207ENST00000540998 CCNE2O96020 404 aa10.99□□□□□ -0.65
CDC42SE1-207ENST00000540998 HARSP12081 509 aaKnown RBP10.99□□□□□ -0.65
CDC42SE1-207ENST00000540998 CA4P22748 312 aa10.99□□□□□ -0.65
CDC42SE1-207ENST00000540998 ATP11AP98196 1134 aa10.99□□□□□ -0.65
CDC42SE1-207ENST00000540998 ZBED8Q8IZ13 594 aa10.99□□□□□ -0.65
CDC42SE1-207ENST00000540998 MAML1Q92585 1016 aa10.99□□□□□ -0.65
CDC42SE1-207ENST00000540998 MAK16Q9BXY0 300 aaKnown RBP10.99□□□□□ -0.65
CDC42SE1-207ENST00000540998 TRABDQ9H4I3 376 aa10.99□□□□□ -0.65
CDC42SE1-207ENST00000540998 CCPG1Q9ULG6 757 aa10.99□□□□□ -0.65
CDC42SE1-207ENST00000540998 ATRNL1Q5VV63 1379 aa10.99□□□□□ -0.65
CDC42SE1-207ENST00000540998 PEX11AO75192 247 aa10.99□□□□□ -0.65
CDC42SE1-207ENST00000540998 CDH16O75309 829 aa10.99□□□□□ -0.65
CDC42SE1-207ENST00000540998 CCND1P24385 295 aa10.99□□□□□ -0.65
CDC42SE1-207ENST00000540998 GPS1Q13098 491 aa10.99□□□□□ -0.65
CDC42SE1-207ENST00000540998 TAF1BQ53T94 588 aaPredicted RBP10.99□□□□□ -0.65
CDC42SE1-207ENST00000540998 ATL2Q8NHH9 583 aa10.99□□□□□ -0.65
CDC42SE1-207ENST00000540998 TMEM121Q9BTD3 319 aa10.99□□□□□ -0.65
CDC42SE1-207ENST00000540998 TBC1D10AQ9BXI6 508 aa10.99□□□□□ -0.65
CDC42SE1-207ENST00000540998 TMEM39BQ9GZU3 492 aa10.99□□□□□ -0.65
CDC42SE1-207ENST00000540998 TMEM206Q9H813 350 aa10.99□□□□□ -0.65
CDC42SE1-207ENST00000540998 UBN1Q9NPG3 1134 aa10.99□□□□□ -0.65
CDC42SE1-207ENST00000540998 UVRAGQ9P2Y5 699 aa10.99□□□□□ -0.65
CDC42SE1-207ENST00000540998 TBX20Q9UMR3 447 aa10.99□□□□□ -0.65
CDC42SE1-207ENST00000540998 ZNF148Q9UQR1 794 aa10.99□□□□□ -0.65
CDC42SE1-207ENST00000540998 NEU2Q9Y3R4 380 aa10.99□□□□□ -0.65
CDC42SE1-207ENST00000540998 AHDC1Q5TGY3 1603 aaPredicted RBP10.99□□□□□ -0.65
CDC42SE1-207ENST00000540998 HNRNPDLO14979 420 aaKnown RBP10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 ASMTLO95671 621 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 P4HBP07237 508 aaKnown RBP10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 UNGP13051 313 aaPredicted RBP10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 ADRA1DP25100 572 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 CHRNA5P30532 468 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 SSTR1P30872 391 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 KLF1Q13351 362 aaPredicted RBP10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 ARHGEF18Q6ZSZ5 1173 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 TMEM161BQ8NDZ6 487 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 RFWD2Q8NHY2 731 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 SLC7A6OSQ96CW6 309 aaPredicted RBP10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 ZBTB45Q96K62 511 aaPredicted RBP10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 PLCD4Q9BRC7 762 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 IDI2Q9BXS1 227 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 RAVER2Q9HCJ3 691 aaKnown RBP10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 ZBTB12Q9Y330 459 aaPredicted RBP10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 UBE4BO95155 1302 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 SLX4Q8IY92 1834 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 TESPA1A2RU30 521 aaPredicted RBP10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 SPDYE5A6NIY4 337 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 GBP1P32455 592 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 QARSP47897 775 aaKnown RBP10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 ARSEP51690 589 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 GTF2BQ00403 316 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 PLCB3Q01970 1234 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 STRN3Q13033 797 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 MAPK6Q16659 721 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 SMTNL2Q2TAL5 461 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 TKFCQ3LXA3 575 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 CC2D2BQ6DHV5 1058 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 CAPRIN2Q6IMN6 1127 aaKnown RBP10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 TMEM270Q6UE05 265 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 MFSD7Q6UXD7 560 aa10.98□□□□□ -0.65
CDC42SE1-207ENST00000540998 MTDHQ86UE4 582 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms