RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 RHOBTB3O94955 611 aa10□□□□□ -0.81
SNHG1-215ENST00000540904 SPATA31D3P0C874 917 aa10□□□□□ -0.81
SNHG1-215ENST00000540904 HOXB8P17481 243 aaPredicted RBP10□□□□□ -0.81
SNHG1-215ENST00000540904 FGFR3P22607 806 aa10□□□□□ -0.81
SNHG1-215ENST00000540904 WNT7BP56706 349 aa10□□□□□ -0.81
SNHG1-215ENST00000540904 TFAMQ00059 246 aaKnown RBP10□□□□□ -0.81
SNHG1-215ENST00000540904 CREMQ03060 361 aa10□□□□□ -0.81
SNHG1-215ENST00000540904 SMAD4Q13485 552 aaKnown RBP10□□□□□ -0.81
SNHG1-215ENST00000540904 PNOCQ13519 176 aa10□□□□□ -0.81
SNHG1-215ENST00000540904 PSMD5Q16401 504 aa10□□□□□ -0.81
SNHG1-215ENST00000540904 C9orf57Q5W0N0 161 aa10□□□□□ -0.81
SNHG1-215ENST00000540904 SYCE2Q6PIF2 218 aa10□□□□□ -0.81
SNHG1-215ENST00000540904 SPATA31D4Q6ZUB0 917 aa10□□□□□ -0.81
SNHG1-215ENST00000540904 CBWD2Q8IUF1 395 aa10□□□□□ -0.81
SNHG1-215ENST00000540904 BRSK2Q8IWQ3 736 aa10□□□□□ -0.81
SNHG1-215ENST00000540904 EFCAB13Q8IY85 973 aa10□□□□□ -0.81
SNHG1-215ENST00000540904 GPR65Q8IYL9 337 aa10□□□□□ -0.81
SNHG1-215ENST00000540904 C12orf76Q8N812 135 aaPredicted RBP10□□□□□ -0.81
SNHG1-215ENST00000540904 RDH13Q8NBN7 331 aa10□□□□□ -0.81
SNHG1-215ENST00000540904 LNX1Q8TBB1 728 aaPredicted RBP10□□□□□ -0.81
SNHG1-215ENST00000540904 FBXL18Q96ME1 805 aa10□□□□□ -0.81
SNHG1-215ENST00000540904 UHRF1Q96T88 793 aaPredicted RBP10□□□□□ -0.81
SNHG1-215ENST00000540904 PDE11AQ9HCR9 933 aa10□□□□□ -0.81
SNHG1-215ENST00000540904 FNIP2Q9P278 1114 aa10□□□□□ -0.81
SNHG1-215ENST00000540904 MAPK8IP1Q9UQF2 711 aa10□□□□□ -0.81
SNHG1-215ENST00000540904 C2CD2Q9Y426 696 aa10□□□□□ -0.81
SNHG1-215ENST00000540904 USP15Q9Y4E8 981 aaPredicted RBP10□□□□□ -0.81
SNHG1-215ENST00000540904 DLL1O00548 723 aa9.99□□□□□ -0.81
SNHG1-215ENST00000540904 PPEF2O14830 753 aa9.99□□□□□ -0.81
SNHG1-215ENST00000540904 ADAM12O43184 909 aa9.99□□□□□ -0.81
SNHG1-215ENST00000540904 KINO60870 393 aaKnown RBP9.99□□□□□ -0.81
SNHG1-215ENST00000540904 GLUD1P00367 558 aa9.99□□□□□ -0.81
SNHG1-215ENST00000540904 SNRPFP62306 86 aaKnown RBP9.99□□□□□ -0.81
SNHG1-215ENST00000540904 KCNB1Q14721 858 aa9.99□□□□□ -0.81
SNHG1-215ENST00000540904 SMAD2Q15796 467 aaKnown RBP9.99□□□□□ -0.81
SNHG1-215ENST00000540904 SNRNP35Q16560 246 aaKnown RBP9.99□□□□□ -0.81
SNHG1-215ENST00000540904 RARS2Q5T160 578 aaKnown RBP9.99□□□□□ -0.81
SNHG1-215ENST00000540904 PDXDC1Q6P996 788 aa9.99□□□□□ -0.81
SNHG1-215ENST00000540904 ANKS3Q6ZW76 656 aa9.99□□□□□ -0.81
SNHG1-215ENST00000540904 XXYLT1Q8NBI6 393 aa9.99□□□□□ -0.81
SNHG1-215ENST00000540904 GOLGA5Q8TBA6 731 aa9.99□□□□□ -0.81
SNHG1-215ENST00000540904 ERCC4Q92889 916 aaPredicted RBP9.99□□□□□ -0.81
SNHG1-215ENST00000540904 SUSD3Q96L08 255 aa9.99□□□□□ -0.81
SNHG1-215ENST00000540904 CLSTN3Q9BQT9 956 aa9.99□□□□□ -0.81
SNHG1-215ENST00000540904 S1PR5Q9H228 398 aa9.99□□□□□ -0.81
SNHG1-215ENST00000540904 KIAA1586Q9HCI6 787 aa9.99□□□□□ -0.81
SNHG1-215ENST00000540904 MAN1C1Q9NR34 630 aa9.99□□□□□ -0.81
SNHG1-215ENST00000540904 DZANK1Q9NVP4 752 aa9.99□□□□□ -0.81
SNHG1-215ENST00000540904 DPP3Q9NY33 737 aa9.99□□□□□ -0.81
SNHG1-215ENST00000540904 CGNQ9P2M7 1197 aaKnown RBP9.99□□□□□ -0.81
SNHG1-215ENST00000540904 HOOK1Q9UJC3 728 aaKnown RBP9.99□□□□□ -0.81
SNHG1-215ENST00000540904 TCHHQ07283 1943 aa9.99□□□□□ -0.81
SNHG1-215ENST00000540904 A0A0C4DFX4 3053 aa9.98□□□□□ -0.81
SNHG1-215ENST00000540904 ANO9A1A5B4 782 aa9.98□□□□□ -0.81
SNHG1-215ENST00000540904 SYN3O14994 580 aa9.98□□□□□ -0.81
SNHG1-215ENST00000540904 TGM5O43548 720 aa9.98□□□□□ -0.81
SNHG1-215ENST00000540904 EXOC3O60645 756 aa9.98□□□□□ -0.81
SNHG1-215ENST00000540904 PRPF40AO75400 957 aaKnown RBP9.98□□□□□ -0.81
SNHG1-215ENST00000540904 KIF20AO95235 890 aa9.98□□□□□ -0.81
SNHG1-215ENST00000540904 SMC2O95347 1197 aa9.98□□□□□ -0.81
SNHG1-215ENST00000540904 WEE2P0C1S8 567 aa9.98□□□□□ -0.81
SNHG1-215ENST00000540904 TMEM191BP0C7N4 346 aa9.98□□□□□ -0.81
SNHG1-215ENST00000540904 OR1D2P34982 312 aa9.98□□□□□ -0.81
SNHG1-215ENST00000540904 LILRA4P59901 499 aa9.98□□□□□ -0.81
SNHG1-215ENST00000540904 VARS2Q5ST30 1063 aaKnown RBP9.98□□□□□ -0.81
SNHG1-215ENST00000540904 LMBRD2Q68DH5 695 aaPredicted RBP9.98□□□□□ -0.81
SNHG1-215ENST00000540904 CES5AQ6NT32 575 aa9.98□□□□□ -0.81
SNHG1-215ENST00000540904 ELMSAN1Q6PJG2 1045 aa9.98□□□□□ -0.81
SNHG1-215ENST00000540904 RSPO2Q6UXX9 243 aaPredicted RBP9.98□□□□□ -0.81
SNHG1-215ENST00000540904 TMC5Q6UXY8 1006 aa9.98□□□□□ -0.81
SNHG1-215ENST00000540904 DSTYKQ6XUX3 929 aa9.98□□□□□ -0.81
SNHG1-215ENST00000540904 NT5DC4Q86YG4 428 aa9.98□□□□□ -0.81
SNHG1-215ENST00000540904 SMYD4Q8IYR2 804 aaPredicted RBP9.98□□□□□ -0.81
SNHG1-215ENST00000540904 C1orf127Q8N9H9 656 aa9.98□□□□□ -0.81
SNHG1-215ENST00000540904 APPL2Q8NEU8 664 aa9.98□□□□□ -0.81
SNHG1-215ENST00000540904 CACTINQ8WUQ7 758 aaKnown RBP9.98□□□□□ -0.81
SNHG1-215ENST00000540904 FAM84AQ96KN4 292 aa9.98□□□□□ -0.81
SNHG1-215ENST00000540904 TIGD1Q96MW7 591 aa9.98□□□□□ -0.81
SNHG1-215ENST00000540904 MTMR12Q9C0I1 747 aa9.98□□□□□ -0.81
SNHG1-215ENST00000540904 ADAM7Q9H2U9 754 aa9.98□□□□□ -0.81
SNHG1-215ENST00000540904 KCTD10Q9H3F6 313 aa9.98□□□□□ -0.81
SNHG1-215ENST00000540904 SFXN1Q9H9B4 322 aa9.98□□□□□ -0.81
SNHG1-215ENST00000540904 RMND1Q9NWS8 449 aa9.98□□□□□ -0.81
SNHG1-215ENST00000540904 MTRRQ9UBK8 725 aa9.98□□□□□ -0.81
SNHG1-215ENST00000540904 DPP7Q9UHL4 492 aa9.98□□□□□ -0.81
SNHG1-215ENST00000540904 CDH22Q9UJ99 828 aa9.98□□□□□ -0.81
SNHG1-215ENST00000540904 PCDHB8Q9UN66 801 aa9.98□□□□□ -0.81
SNHG1-215ENST00000540904 TIMM13Q9Y5L4 95 aaPredicted RBP9.98□□□□□ -0.81
SNHG1-215ENST00000540904 BACE2Q9Y5Z0 518 aa9.98□□□□□ -0.81
SNHG1-215ENST00000540904 CDY1Q9Y6F8 540 aa9.98□□□□□ -0.81
SNHG1-215ENST00000540904 H7C4K7 107 aa9.97□□□□□ -0.81
SNHG1-215ENST00000540904 PIRO00625 290 aa9.97□□□□□ -0.81
SNHG1-215ENST00000540904 SPTLC1O15269 473 aa9.97□□□□□ -0.81
SNHG1-215ENST00000540904 CALUO43852 315 aaPredicted RBP9.97□□□□□ -0.81
SNHG1-215ENST00000540904 NR3C1P04150 777 aa9.97□□□□□ -0.81
SNHG1-215ENST00000540904 ITGB3P05106 788 aa9.97□□□□□ -0.81
SNHG1-215ENST00000540904 KRT19P08727 400 aa9.97□□□□□ -0.81
SNHG1-215ENST00000540904 DLATP10515 647 aaKnown RBP9.97□□□□□ -0.81
SNHG1-215ENST00000540904 POLR2BP30876 1174 aaKnown RBP9.97□□□□□ -0.81
SNHG1-215ENST00000540904 SSTR3P32745 418 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms