RNA–Protein interactions for RNA: ENST00000540738.3

COLCA1-204, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,537 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-204ENST00000540738 SLC7A5P2Q9GIP4 190 aa15.01□□□□□ -0.01
COLCA1-204ENST00000540738 EXOC1LA0A1B0GW35 172 aa15.01□□□□□ -0.01
COLCA1-204ENST00000540738 FOXN1O15353 648 aa15.01□□□□□ -0.01
COLCA1-204ENST00000540738 MED24O75448 989 aa15.01□□□□□ -0.01
COLCA1-204ENST00000540738 CXCR5P32302 372 aa15.01□□□□□ -0.01
COLCA1-204ENST00000540738 GFPT1Q06210 699 aaPredicted RBP15.01□□□□□ -0.01
COLCA1-204ENST00000540738 SLAIN1Q8ND83 568 aa15.01□□□□□ -0.01
COLCA1-204ENST00000540738 CDK5RAP1Q96SZ6 601 aaKnown RBP15.01□□□□□ -0.01
COLCA1-204ENST00000540738 LGALS2P05162 132 aa15.01□□□□□ -0.01
COLCA1-204ENST00000540738 HSPA8P11142 646 aaKnown RBP15.01□□□□□ -0.01
COLCA1-204ENST00000540738 GRK4P32298 578 aa15.01□□□□□ -0.01
COLCA1-204ENST00000540738 PTPAQ15257 358 aa15.01□□□□□ -0.01
COLCA1-204ENST00000540738 PID1Q7Z2X4 250 aa15.01□□□□□ -0.01
COLCA1-204ENST00000540738 KCNB2Q92953 911 aa15.01□□□□□ -0.01
COLCA1-204ENST00000540738 MRC1P22897 1456 aa15□□□□□ -0.01
COLCA1-204ENST00000540738 ANO9A1A5B4 782 aa15□□□□□ -0.01
COLCA1-204ENST00000540738 AP1G2O75843 785 aa15□□□□□ -0.01
COLCA1-204ENST00000540738 ASMTLO95671 621 aa15□□□□□ -0.01
COLCA1-204ENST00000540738 SLC7A14Q8TBB6 771 aa15□□□□□ -0.01
COLCA1-204ENST00000540738 PBXIP1Q96AQ6 731 aa15□□□□□ -0.01
COLCA1-204ENST00000540738 SH3KBP1Q96B97 665 aa15□□□□□ -0.01
COLCA1-204ENST00000540738 FTHL17Q9BXU8 183 aa15□□□□□ -0.01
COLCA1-204ENST00000540738 THG1LQ9NWX6 298 aaKnown RBP15□□□□□ -0.01
COLCA1-204ENST00000540738 CAPN15O75808 1086 aa15□□□□□ -0.01
COLCA1-204ENST00000540738 KRT38O76015 456 aa15□□□□□ -0.01
COLCA1-204ENST00000540738 MBL2P11226 248 aaPredicted RBP15□□□□□ -0.01
COLCA1-204ENST00000540738 KLRC2P26717 231 aa15□□□□□ -0.01
COLCA1-204ENST00000540738 CDH18Q13634 790 aa15□□□□□ -0.01
COLCA1-204ENST00000540738 ZBTB9Q96C00 473 aa15□□□□□ -0.01
COLCA1-204ENST00000540738 OGFRQ9NZT2 677 aa15□□□□□ -0.01
COLCA1-204ENST00000540738 WEE2P0C1S8 567 aa15□□□□□ -0.01
COLCA1-204ENST00000540738 CUL1Q13616 776 aa15□□□□□ -0.01
COLCA1-204ENST00000540738 MOB2Q70IA6 237 aa15□□□□□ -0.01
COLCA1-204ENST00000540738 TAS2R42Q7RTR8 314 aa15□□□□□ -0.01
COLCA1-204ENST00000540738 ADGRF2Q8IZF7 708 aa15□□□□□ -0.01
COLCA1-204ENST00000540738 CYP39A1Q9NYL5 469 aa15□□□□□ -0.01
COLCA1-204ENST00000540738 RIC1Q4ADV7 1423 aa15□□□□□ -0.01
COLCA1-204ENST00000540738 EEF2KO00418 725 aaKnown RBP15□□□□□ -0.01
COLCA1-204ENST00000540738 NOL3O60936 208 aaKnown RBP15□□□□□ -0.01
COLCA1-204ENST00000540738 EFCAB14O75071 495 aa15□□□□□ -0.01
COLCA1-204ENST00000540738 MAPTP10636 758 aaKnown RBP15□□□□□ -0.01
COLCA1-204ENST00000540738 FLT3LGP49771 235 aa15□□□□□ -0.01
COLCA1-204ENST00000540738 CGRRF1Q99675 332 aa15□□□□□ -0.01
COLCA1-204ENST00000540738 ATP8A1Q9Y2Q0 1164 aa15□□□□□ -0.01
COLCA1-204ENST00000540738 TBC1D19Q8N5T2 526 aa15□□□□□ -0.01
COLCA1-204ENST00000540738 TTC8Q8TAM2 541 aa15□□□□□ -0.01
COLCA1-204ENST00000540738 FMO2Q99518 471 aa15□□□□□ -0.01
COLCA1-204ENST00000540738 GPRC5CQ9NQ84 441 aa15□□□□□ -0.01
COLCA1-204ENST00000540738 RNASEH1O60930 286 aaKnown RBP14.99□□□□□ -0.01
COLCA1-204ENST00000540738 BEX3Q00994 111 aa14.99□□□□□ -0.01
COLCA1-204ENST00000540738 MMEL1Q495T6 779 aa14.99□□□□□ -0.01
COLCA1-204ENST00000540738 PREPLQ4J6C6 727 aaPredicted RBP14.99□□□□□ -0.01
COLCA1-204ENST00000540738 SPRYD7Q5W111 196 aa14.99□□□□□ -0.01
COLCA1-204ENST00000540738 TTC26A0AVF1 554 aa14.99□□□□□ -0.01
COLCA1-204ENST00000540738 C3orf70A6NLC5 250 aaPredicted RBP14.99□□□□□ -0.01
COLCA1-204ENST00000540738 UCHL3P15374 230 aa14.99□□□□□ -0.01
COLCA1-204ENST00000540738 KPNA1P52294 538 aaPredicted RBP14.99□□□□□ -0.01
COLCA1-204ENST00000540738 GRB10Q13322 594 aa14.99□□□□□ -0.01
COLCA1-204ENST00000540738 PCBP1Q15365 356 aaKnown RBP eCLIP14.99□□□□□ -0.01
COLCA1-204ENST00000540738 RABGAP1LQ5R372 815 aa14.99□□□□□ -0.01
COLCA1-204ENST00000540738 CELF3Q5SZQ8 465 aaKnown RBP14.99□□□□□ -0.01
COLCA1-204ENST00000540738 ARHGEF2Q92974 986 aaKnown RBP14.99□□□□□ -0.01
COLCA1-204ENST00000540738 RSAD1Q9HA92 442 aa14.99□□□□□ -0.01
COLCA1-204ENST00000540738 CYP3A43Q9HB55 503 aa14.99□□□□□ -0.01
COLCA1-204ENST00000540738 CAPN11Q9UMQ6 739 aa14.99□□□□□ -0.01
COLCA1-204ENST00000540738 FAM50BQ9Y247 325 aa14.99□□□□□ -0.01
COLCA1-204ENST00000540738 CTDNEP1O95476 244 aa14.99□□□□□ -0.01
COLCA1-204ENST00000540738 NCAM1P13591 858 aa14.99□□□□□ -0.01
COLCA1-204ENST00000540738 DHX9Q08211 1270 aaKnown RBP14.99□□□□□ -0.01
COLCA1-204ENST00000540738 CXCL17Q6UXB2 119 aa14.99□□□□□ -0.01
COLCA1-204ENST00000540738 OR6P1Q8NGX9 317 aa14.99□□□□□ -0.01
COLCA1-204ENST00000540738 DRC3Q9H069 523 aa14.99□□□□□ -0.01
COLCA1-204ENST00000540738 ATRNO75882 1429 aa14.99□□□□□ -0.01
COLCA1-204ENST00000540738 F9P00740 461 aa14.99□□□□□ -0.01
COLCA1-204ENST00000540738 IGFBP4P22692 258 aa14.99□□□□□ -0.01
COLCA1-204ENST00000540738 IFNAR2P48551 515 aa14.99□□□□□ -0.01
COLCA1-204ENST00000540738 CREMQ03060 361 aa14.99□□□□□ -0.01
COLCA1-204ENST00000540738 PSMD6Q15008 389 aa14.99□□□□□ -0.01
COLCA1-204ENST00000540738 DCAF6Q58WW2 860 aa14.99□□□□□ -0.01
COLCA1-204ENST00000540738 NT5DC4Q86YG4 428 aa14.99□□□□□ -0.01
COLCA1-204ENST00000540738 WDR49Q8IV35 697 aa14.99□□□□□ -0.01
COLCA1-204ENST00000540738 RCOR2Q8IZ40 523 aa14.99□□□□□ -0.01
COLCA1-204ENST00000540738 WHAMMQ8TF30 809 aa14.99□□□□□ -0.01
COLCA1-204ENST00000540738 AP1M1Q9BXS5 423 aa14.99□□□□□ -0.01
COLCA1-204ENST00000540738 FBXO21O94952 628 aa14.98□□□□□ -0.01
COLCA1-204ENST00000540738 VDRP11473 427 aa14.98□□□□□ -0.01
COLCA1-204ENST00000540738 MYBPC2Q14324 1141 aa14.98□□□□□ -0.01
COLCA1-204ENST00000540738 TMED2Q15363 201 aa14.98□□□□□ -0.01
COLCA1-204ENST00000540738 CCDC144BQ3MJ40 725 aa14.98□□□□□ -0.01
COLCA1-204ENST00000540738 TMTC4Q5T4D3 741 aa14.98□□□□□ -0.01
COLCA1-204ENST00000540738 GPAT2Q6NUI2 795 aa14.98□□□□□ -0.01
COLCA1-204ENST00000540738 MYRIPQ8NFW9 859 aa14.98□□□□□ -0.01
COLCA1-204ENST00000540738 TMC2Q8TDI7 906 aa14.98□□□□□ -0.01
COLCA1-204ENST00000540738 SLC5A5Q92911 643 aa14.98□□□□□ -0.01
COLCA1-204ENST00000540738 CPB2Q96IY4 423 aa14.98□□□□□ -0.01
COLCA1-204ENST00000540738 ITGA11Q9UKX5 1188 aa14.98□□□□□ -0.01
COLCA1-204ENST00000540738 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.98□□□□□ -0.01
COLCA1-204ENST00000540738 TTLL13PA6NNM8 815 aa14.98□□□□□ -0.01
COLCA1-204ENST00000540738 ATXN8OSP0DMR3 200 aa14.98□□□□□ -0.01
COLCA1-204ENST00000540738 MTA1Q13330 715 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms