RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 PACSIN1Q9BY11 444 aa4.86□□□□□ -1.63
MDM2-227ENST00000540709 UNKLQ9H9P5 680 aaKnown RBP4.86□□□□□ -1.63
MDM2-227ENST00000540709 HSFX1Q9UBD0 423 aa4.86□□□□□ -1.63
MDM2-227ENST00000540709 LIMCH1Q9UPQ0 1083 aa4.86□□□□□ -1.63
MDM2-227ENST00000540709 DMTF1Q9Y222 760 aa4.86□□□□□ -1.63
MDM2-227ENST00000540709 PCDHGA9Q9Y5G4 932 aaKnown RBP4.86□□□□□ -1.63
MDM2-227ENST00000540709 PCDHGA8Q9Y5G5 932 aa4.86□□□□□ -1.63
MDM2-227ENST00000540709 PCDHGA7Q9Y5G6 932 aa4.86□□□□□ -1.63
MDM2-227ENST00000540709 PCDHGA6Q9Y5G7 932 aa4.86□□□□□ -1.63
MDM2-227ENST00000540709 PCDHGA3Q9Y5H0 932 aa4.86□□□□□ -1.63
MDM2-227ENST00000540709 SPATA31A6Q5VVP1 1343 aa4.86□□□□□ -1.63
MDM2-227ENST00000540709 SALL3Q9BXA9 1300 aa4.86□□□□□ -1.63
MDM2-227ENST00000540709 TRGV11A0A075B6L2 103 aa4.85□□□□□ -1.63
MDM2-227ENST00000540709 SHTN1A0MZ66 631 aa4.85□□□□□ -1.63
MDM2-227ENST00000540709 HAUS5O94927 633 aa4.85□□□□□ -1.63
MDM2-227ENST00000540709 CLK3P49761 638 aaKnown RBP4.85□□□□□ -1.63
MDM2-227ENST00000540709 CDC42EP1Q00587 391 aa4.85□□□□□ -1.63
MDM2-227ENST00000540709 SCAPQ12770 1279 aa4.85□□□□□ -1.63
MDM2-227ENST00000540709 INAVAQ3KP66 663 aa4.85□□□□□ -1.63
MDM2-227ENST00000540709 C3orf36Q3SXR2 165 aa4.85□□□□□ -1.63
MDM2-227ENST00000540709 DACT2Q5SW24 774 aa4.85□□□□□ -1.63
MDM2-227ENST00000540709 EFCAB2Q5VUJ9 269 aa4.85□□□□□ -1.63
MDM2-227ENST00000540709 Q6ZNX1 250 aa4.85□□□□□ -1.63
MDM2-227ENST00000540709 RD3Q7Z3Z2 195 aa4.85□□□□□ -1.63
MDM2-227ENST00000540709 DCBLD1Q8N8Z6 715 aa4.85□□□□□ -1.63
MDM2-227ENST00000540709 PRPF38AQ8NAV1 312 aaKnown RBP4.85□□□□□ -1.63
MDM2-227ENST00000540709 NSUN7Q8NE18 718 aaKnown RBP4.85□□□□□ -1.63
MDM2-227ENST00000540709 CAGE1Q8TC20 777 aa4.85□□□□□ -1.63
MDM2-227ENST00000540709 SSH1Q8WYL5 1049 aa4.85□□□□□ -1.63
MDM2-227ENST00000540709 TMEM125Q96AQ2 219 aa4.85□□□□□ -1.63
MDM2-227ENST00000540709 TEKT5Q96M29 485 aa4.85□□□□□ -1.63
MDM2-227ENST00000540709 TLR10Q9BXR5 811 aa4.85□□□□□ -1.63
MDM2-227ENST00000540709 IMPG2Q9BZV3 1241 aa4.85□□□□□ -1.63
MDM2-227ENST00000540709 FAM30AQ9NZY2 134 aa4.85□□□□□ -1.63
MDM2-227ENST00000540709 TLK1Q9UKI8 766 aa4.85□□□□□ -1.63
MDM2-227ENST00000540709 INSL6Q9Y581 213 aa4.85□□□□□ -1.63
MDM2-227ENST00000540709 MAST3O60307 1309 aa4.84□□□□□ -1.63
MDM2-227ENST00000540709 HTRA2O43464 458 aaPredicted RBP4.84□□□□□ -1.63
MDM2-227ENST00000540709 ZFPL1O95159 310 aa4.84□□□□□ -1.63
MDM2-227ENST00000540709 CD1AP06126 327 aa4.84□□□□□ -1.63
MDM2-227ENST00000540709 SLC6A4P31645 630 aa4.84□□□□□ -1.63
MDM2-227ENST00000540709 VAV2P52735 878 aa4.84□□□□□ -1.63
MDM2-227ENST00000540709 MRPS35P82673 323 aaKnown RBP4.84□□□□□ -1.63
MDM2-227ENST00000540709 FPGSQ05932 587 aa4.84□□□□□ -1.63
MDM2-227ENST00000540709 SLFN5Q08AF3 891 aa4.84□□□□□ -1.63
MDM2-227ENST00000540709 PREPLQ4J6C6 727 aaPredicted RBP4.84□□□□□ -1.63
MDM2-227ENST00000540709 PABPC1LQ4VXU2 614 aaKnown RBP4.84□□□□□ -1.63
MDM2-227ENST00000540709 PPP4R3AQ6IN85 833 aa4.84□□□□□ -1.63
MDM2-227ENST00000540709 FBXO42Q6P3S6 717 aa4.84□□□□□ -1.63
MDM2-227ENST00000540709 ARHGEF25Q86VW2 580 aa4.84□□□□□ -1.63
MDM2-227ENST00000540709 SLC17A8Q8NDX2 589 aa4.84□□□□□ -1.63
MDM2-227ENST00000540709 IFI44Q8TCB0 444 aa4.84□□□□□ -1.63
MDM2-227ENST00000540709 ACTRT2Q8TDY3 377 aa4.84□□□□□ -1.63
MDM2-227ENST00000540709 VRK1Q99986 396 aaPredicted RBP4.84□□□□□ -1.63
MDM2-227ENST00000540709 DUSP26Q9BV47 211 aa4.84□□□□□ -1.63
MDM2-227ENST00000540709 SLAMF7Q9NQ25 335 aa4.84□□□□□ -1.63
MDM2-227ENST00000540709 TMEM74BQ9NUR3 256 aa4.84□□□□□ -1.63
MDM2-227ENST00000540709 SLC45A2Q9UMX9 530 aa4.84□□□□□ -1.63
MDM2-227ENST00000540709 MASP2O00187 686 aa4.83□□□□□ -1.64
MDM2-227ENST00000540709 GABRDO14764 452 aa4.83□□□□□ -1.64
MDM2-227ENST00000540709 PEX1O43933 1283 aa4.83□□□□□ -1.64
MDM2-227ENST00000540709 MRPS21P82921 87 aaKnown RBP4.83□□□□□ -1.64
MDM2-227ENST00000540709 AMPD3Q01432 767 aa4.83□□□□□ -1.64
MDM2-227ENST00000540709 ZNF844Q08AG5 666 aa4.83□□□□□ -1.64
MDM2-227ENST00000540709 SF3B3Q15393 1217 aaKnown RBP4.83□□□□□ -1.64
MDM2-227ENST00000540709 CD300EQ496F6 205 aaPredicted RBP4.83□□□□□ -1.64
MDM2-227ENST00000540709 PRR16Q569H4 304 aa4.83□□□□□ -1.64
MDM2-227ENST00000540709 SIMC1Q8NDZ2 872 aa4.83□□□□□ -1.64
MDM2-227ENST00000540709 SSH3Q8TE77 659 aa4.83□□□□□ -1.64
MDM2-227ENST00000540709 MED15Q96RN5 788 aa4.83□□□□□ -1.64
MDM2-227ENST00000540709 IPPQ9Y573 584 aa4.83□□□□□ -1.64
MDM2-227ENST00000540709 PCDHB1Q9Y5F3 818 aa4.83□□□□□ -1.64
MDM2-227ENST00000540709 MYADML2A6NDP7 307 aa4.82□□□□□ -1.64
MDM2-227ENST00000540709 TOR1BO14657 336 aa4.82□□□□□ -1.64
MDM2-227ENST00000540709 RPLP2P05387 115 aaKnown RBP4.82□□□□□ -1.64
MDM2-227ENST00000540709 TYRP1P17643 537 aa4.82□□□□□ -1.64
MDM2-227ENST00000540709 EDNRBP24530 442 aa4.82□□□□□ -1.64
MDM2-227ENST00000540709 SMARCA1P28370 1054 aa4.82□□□□□ -1.64
MDM2-227ENST00000540709 WASP42768 502 aa4.82□□□□□ -1.64
MDM2-227ENST00000540709 ZNF169Q14929 603 aaPredicted RBP4.82□□□□□ -1.64
MDM2-227ENST00000540709 RAB39AQ14964 217 aa4.82□□□□□ -1.64
MDM2-227ENST00000540709 ODF1Q14990 250 aa4.82□□□□□ -1.64
MDM2-227ENST00000540709 KHDC1Q4VXA5 237 aaKnown RBP4.82□□□□□ -1.64
MDM2-227ENST00000540709 SP5Q6BEB4 398 aaPredicted RBP4.82□□□□□ -1.64
MDM2-227ENST00000540709 TSHZ1Q6ZSZ6 1077 aa4.82□□□□□ -1.64
MDM2-227ENST00000540709 CLNKQ7Z7G1 428 aa4.82□□□□□ -1.64
MDM2-227ENST00000540709 AOPEPQ8N6M6 819 aa4.82□□□□□ -1.64
MDM2-227ENST00000540709 BOLLQ8N9W6 283 aaKnown RBP4.82□□□□□ -1.64
MDM2-227ENST00000540709 TOR1AIP2Q8NFQ8 470 aa4.82□□□□□ -1.64
MDM2-227ENST00000540709 FBXO41Q8TF61 875 aa4.82□□□□□ -1.64
MDM2-227ENST00000540709 COA7Q96BR5 231 aa4.82□□□□□ -1.64
MDM2-227ENST00000540709 FBXL20Q96IG2 436 aa4.82□□□□□ -1.64
MDM2-227ENST00000540709 R3HDMLQ9H3Y0 253 aa4.82□□□□□ -1.64
MDM2-227ENST00000540709 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.82□□□□□ -1.64
MDM2-227ENST00000540709 SERPINB13Q9UIV8 391 aa4.82□□□□□ -1.64
MDM2-227ENST00000540709 ALG1L2C9J202 215 aa4.81□□□□□ -1.64
MDM2-227ENST00000540709 SIM1P81133 766 aaPredicted RBP4.81□□□□□ -1.64
MDM2-227ENST00000540709 FLYWCH1Q4VC44 716 aa4.81□□□□□ -1.64
MDM2-227ENST00000540709 AKNAD1Q5T1N1 836 aa4.81□□□□□ -1.64
MDM2-227ENST00000540709 SLC30A10Q6XR72 485 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms