RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 ANK1P16157 1881 aa18.11■□□□□ 0.49
UBC-208ENST00000540700 ATG2AQ2TAZ0 1938 aa18.11■□□□□ 0.49
UBC-208ENST00000540700 RIF1Q5UIP0 2472 aaKnown RBP18.1■□□□□ 0.49
UBC-208ENST00000540700 ZNF233A6NK53 670 aa18.1■□□□□ 0.49
UBC-208ENST00000540700 LETM1O95202 739 aaPredicted RBP18.1■□□□□ 0.49
UBC-208ENST00000540700 PBX3P40426 434 aa18.1■□□□□ 0.49
UBC-208ENST00000540700 YARSP54577 528 aaKnown RBP18.1■□□□□ 0.49
UBC-208ENST00000540700 DLG4P78352 724 aa18.1■□□□□ 0.49
UBC-208ENST00000540700 ZBTB6Q15916 424 aa18.1■□□□□ 0.49
UBC-208ENST00000540700 KYAT1Q16773 422 aa18.1■□□□□ 0.49
UBC-208ENST00000540700 LMBRD2Q68DH5 695 aaPredicted RBP18.1■□□□□ 0.49
UBC-208ENST00000540700 FOXR2Q6PJQ5 311 aa18.1■□□□□ 0.49
UBC-208ENST00000540700 IRF2BP1Q8IU81 584 aa18.1■□□□□ 0.49
UBC-208ENST00000540700 ABI1Q8IZP0 508 aa18.1■□□□□ 0.49
UBC-208ENST00000540700 POF1BQ8WVV4 589 aa18.1■□□□□ 0.49
UBC-208ENST00000540700 PAAF1Q9BRP4 392 aa18.1■□□□□ 0.49
UBC-208ENST00000540700 PLEKHA5Q9HAU0 1116 aa18.1■□□□□ 0.49
UBC-208ENST00000540700 DNAJB4Q9UDY4 337 aa18.1■□□□□ 0.49
UBC-208ENST00000540700 F8W810 466 aa18.09■□□□□ 0.49
UBC-208ENST00000540700 CETN3O15182 167 aa18.09■□□□□ 0.49
UBC-208ENST00000540700 GLP2RO95838 553 aa18.09■□□□□ 0.49
UBC-208ENST00000540700 ERCC5P28715 1186 aaPredicted RBP18.09■□□□□ 0.49
UBC-208ENST00000540700 FKBP3Q00688 224 aaKnown RBP18.09■□□□□ 0.49
UBC-208ENST00000540700 PPP2R3AQ06190 1150 aa18.09■□□□□ 0.49
UBC-208ENST00000540700 DSC1Q08554 894 aa18.09■□□□□ 0.49
UBC-208ENST00000540700 SIGLEC14Q08ET2 396 aa18.09■□□□□ 0.49
UBC-208ENST00000540700 GRIK3Q13003 919 aa18.09■□□□□ 0.49
UBC-208ENST00000540700 CBX2Q14781 532 aaPredicted RBP18.09■□□□□ 0.49
UBC-208ENST00000540700 NCAPHQ15003 741 aa18.09■□□□□ 0.49
UBC-208ENST00000540700 PSMD6Q15008 389 aa18.09■□□□□ 0.49
UBC-208ENST00000540700 COLGALT2Q8IYK4 626 aa18.09■□□□□ 0.49
UBC-208ENST00000540700 LRRC43Q8N309 656 aa18.09■□□□□ 0.49
UBC-208ENST00000540700 MICAL1Q8TDZ2 1067 aa18.09■□□□□ 0.49
UBC-208ENST00000540700 RABGGTAQ92696 567 aa18.09■□□□□ 0.49
UBC-208ENST00000540700 RPS6KC1Q96S38 1066 aa18.09■□□□□ 0.49
UBC-208ENST00000540700 PHF7Q9BWX1 381 aaPredicted RBP18.09■□□□□ 0.49
UBC-208ENST00000540700 SRRTQ9BXP5 876 aaKnown RBP18.09■□□□□ 0.49
UBC-208ENST00000540700 RNF216Q9NWF9 866 aaPredicted RBP18.09■□□□□ 0.49
UBC-208ENST00000540700 KIAA1671Q9BY89 1806 aa18.09■□□□□ 0.49
UBC-208ENST00000540700 PDCD11Q14690 1871 aaKnown RBP18.08■□□□□ 0.49
UBC-208ENST00000540700 BICDL2A1A5D9 508 aa18.08■□□□□ 0.48
UBC-208ENST00000540700 LRRIQ3A6PVS8 624 aaPredicted RBP18.08■□□□□ 0.48
UBC-208ENST00000540700 PER2O15055 1255 aa18.08■□□□□ 0.48
UBC-208ENST00000540700 CCDC192P0DO97 292 aa18.08■□□□□ 0.48
UBC-208ENST00000540700 RBM10P98175 930 aaKnown RBP18.08■□□□□ 0.48
UBC-208ENST00000540700 POU5F1Q01860 360 aaKnown RBP18.08■□□□□ 0.48
UBC-208ENST00000540700 TMEM173Q86WV6 379 aaPredicted RBP18.08■□□□□ 0.48
UBC-208ENST00000540700 FAM186BQ8IYM0 893 aa18.08■□□□□ 0.48
UBC-208ENST00000540700 CSGALNACT2Q8N6G5 542 aa18.08■□□□□ 0.48
UBC-208ENST00000540700 OR5B17Q8NGF7 314 aa18.08■□□□□ 0.48
UBC-208ENST00000540700 URGCPQ8TCY9 931 aa18.08■□□□□ 0.48
UBC-208ENST00000540700 BCL7CQ8WUZ0 217 aaPredicted RBP18.08■□□□□ 0.48
UBC-208ENST00000540700 ZNF516Q92618 1163 aa18.08■□□□□ 0.48
UBC-208ENST00000540700 KIF12Q96FN5 646 aa18.08■□□□□ 0.48
UBC-208ENST00000540700 TLE6Q9H808 572 aa18.08■□□□□ 0.48
UBC-208ENST00000540700 KIAA1586Q9HCI6 787 aa18.08■□□□□ 0.48
UBC-208ENST00000540700 DACH1Q9UI36 760 aa18.08■□□□□ 0.48
UBC-208ENST00000540700 CASTOR2A6NHX0 329 aa18.07■□□□□ 0.48
UBC-208ENST00000540700 H0Y858 1186 aa18.07■□□□□ 0.48
UBC-208ENST00000540700 PPEF2O14830 753 aa18.07■□□□□ 0.48
UBC-208ENST00000540700 MAPK13O15264 365 aa18.07■□□□□ 0.48
UBC-208ENST00000540700 THP07101 528 aa18.07■□□□□ 0.48
UBC-208ENST00000540700 TRIM49P0CI25 452 aa18.07■□□□□ 0.48
UBC-208ENST00000540700 TRIM49CP0CI26 452 aa18.07■□□□□ 0.48
UBC-208ENST00000540700 RPL13P26373 211 aaKnown RBP18.07■□□□□ 0.48
UBC-208ENST00000540700 AVPR2P30518 371 aa18.07■□□□□ 0.48
UBC-208ENST00000540700 PSMC2P35998 433 aaKnown RBP18.07■□□□□ 0.48
UBC-208ENST00000540700 SLC11A1P49279 550 aa18.07■□□□□ 0.48
UBC-208ENST00000540700 MCCD1P59942 119 aaPredicted RBP18.07■□□□□ 0.48
UBC-208ENST00000540700 CT47A1Q5JQC4 288 aaPredicted RBP18.07■□□□□ 0.48
UBC-208ENST00000540700 CD300LGQ6UXG3 332 aa18.07■□□□□ 0.48
UBC-208ENST00000540700 DHX40Q8IX18 779 aaKnown RBP18.07■□□□□ 0.48
UBC-208ENST00000540700 CXorf38Q8TB03 319 aa18.07■□□□□ 0.48
UBC-208ENST00000540700 ENOX1Q8TC92 643 aaKnown RBP18.07■□□□□ 0.48
UBC-208ENST00000540700 PARD3BQ8TEW8 1205 aa18.07■□□□□ 0.48
UBC-208ENST00000540700 CCDC127Q96BQ5 260 aa18.07■□□□□ 0.48
UBC-208ENST00000540700 ASIC4Q96FT7 647 aa18.07■□□□□ 0.48
UBC-208ENST00000540700 CEP63Q96MT8 703 aa18.07■□□□□ 0.48
UBC-208ENST00000540700 MKNK1Q9BUB5 465 aa18.07■□□□□ 0.48
UBC-208ENST00000540700 MRPL9Q9BYD2 267 aaKnown RBP18.07■□□□□ 0.48
UBC-208ENST00000540700 HSD3B7Q9H2F3 369 aa18.07■□□□□ 0.48
UBC-208ENST00000540700 ASB7Q9H672 318 aa18.07■□□□□ 0.48
UBC-208ENST00000540700 TLR9Q9NR96 1032 aa18.07■□□□□ 0.48
UBC-208ENST00000540700 MARCH5Q9NX47 278 aa18.07■□□□□ 0.48
UBC-208ENST00000540700 TRIP11Q15643 1979 aa18.07■□□□□ 0.48
UBC-208ENST00000540700 CITO14578 2027 aa18.06■□□□□ 0.48
UBC-208ENST00000540700 NT5C1B-RDH14C9J2C7 533 aa18.06■□□□□ 0.48
UBC-208ENST00000540700 SLC16A3O15427 465 aaKnown RBP18.06■□□□□ 0.48
UBC-208ENST00000540700 ZC3H11AO75152 810 aaKnown RBP eCLIP18.06■□□□□ 0.48
UBC-208ENST00000540700 IL18RAPO95256 599 aa18.06■□□□□ 0.48
UBC-208ENST00000540700 GALTP07902 379 aa18.06■□□□□ 0.48
UBC-208ENST00000540700 DLATP10515 647 aaKnown RBP18.06■□□□□ 0.48
UBC-208ENST00000540700 TMEM132DQ14C87 1099 aa18.06■□□□□ 0.48
UBC-208ENST00000540700 FILIP1Q7Z7B0 1213 aa18.06■□□□□ 0.48
UBC-208ENST00000540700 C3orf58Q8NDZ4 430 aa18.06■□□□□ 0.48
UBC-208ENST00000540700 CGRRF1Q99675 332 aa18.06■□□□□ 0.48
UBC-208ENST00000540700 SAMSN1Q9NSI8 373 aaKnown RBP18.06■□□□□ 0.48
UBC-208ENST00000540700 KANSL3Q9P2N6 904 aa18.06■□□□□ 0.48
UBC-208ENST00000540700 FRMD4BQ9Y2L6 1034 aa18.06■□□□□ 0.48
UBC-208ENST00000540700 C2CD2Q9Y426 696 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms