RNA–Protein interactions for RNA: ENST00000540452.1

C2CD3-215, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-215ENST00000540452 MROH7Q68CQ1 1323 aa8.88□□□□□ -0.99
C2CD3-215ENST00000540452 CCDC66A2RUB6 948 aa8.88□□□□□ -0.99
C2CD3-215ENST00000540452 PGRMC1O00264 195 aaKnown RBP8.88□□□□□ -0.99
C2CD3-215ENST00000540452 DYNC1LI2O43237 492 aaPredicted RBP8.88□□□□□ -0.99
C2CD3-215ENST00000540452 MED7O43513 233 aa8.88□□□□□ -0.99
C2CD3-215ENST00000540452 BUB1O43683 1085 aa8.88□□□□□ -0.99
C2CD3-215ENST00000540452 GPR32O75388 356 aa8.88□□□□□ -0.99
C2CD3-215ENST00000540452 ZRANB2O95218 330 aaKnown RBP eCLIP8.88□□□□□ -0.99
C2CD3-215ENST00000540452 STAG3L1P0CL83 205 aa8.88□□□□□ -0.99
C2CD3-215ENST00000540452 DARSP14868 501 aaKnown RBP8.88□□□□□ -0.99
C2CD3-215ENST00000540452 EIF4BP23588 611 aaKnown RBP8.88□□□□□ -0.99
C2CD3-215ENST00000540452 PAX3P23760 479 aa8.88□□□□□ -0.99
C2CD3-215ENST00000540452 GNA15P30679 374 aa8.88□□□□□ -0.99
C2CD3-215ENST00000540452 MAN1A1P33908 653 aa8.88□□□□□ -0.99
C2CD3-215ENST00000540452 CRYBB1P53674 252 aaPredicted RBP8.88□□□□□ -0.99
C2CD3-215ENST00000540452 TNNC1P63316 161 aa8.88□□□□□ -0.99
C2CD3-215ENST00000540452 LACTBP83111 547 aaPredicted RBP8.88□□□□□ -0.99
C2CD3-215ENST00000540452 PURAQ00577 322 aaKnown RBP8.88□□□□□ -0.99
C2CD3-215ENST00000540452 PTPN11Q06124 597 aaPredicted RBP8.88□□□□□ -0.99
C2CD3-215ENST00000540452 PTP4A2Q12974 167 aa8.88□□□□□ -0.99
C2CD3-215ENST00000540452 FSCN1Q16658 493 aaKnown RBP8.88□□□□□ -0.99
C2CD3-215ENST00000540452 TMEM132AQ24JP5 1023 aa8.88□□□□□ -0.99
C2CD3-215ENST00000540452 ZNF699Q32M78 642 aa8.88□□□□□ -0.99
C2CD3-215ENST00000540452 GJC2Q5T442 439 aaPredicted RBP8.88□□□□□ -0.99
C2CD3-215ENST00000540452 LIN9Q5TKA1 542 aa8.88□□□□□ -0.99
C2CD3-215ENST00000540452 PRPF38BQ5VTL8 546 aaKnown RBP8.88□□□□□ -0.99
C2CD3-215ENST00000540452 FBXO38Q6PIJ6 1188 aa8.88□□□□□ -0.99
C2CD3-215ENST00000540452 SLC47A2Q86VL8 602 aa8.88□□□□□ -0.99
C2CD3-215ENST00000540452 LRRC52Q8N7C0 313 aa8.88□□□□□ -0.99
C2CD3-215ENST00000540452 USP38Q8NB14 1042 aa8.88□□□□□ -0.99
C2CD3-215ENST00000540452 OR5B17Q8NGF7 314 aa8.88□□□□□ -0.99
C2CD3-215ENST00000540452 TATDN2Q93075 761 aa8.88□□□□□ -0.99
C2CD3-215ENST00000540452 ACAP3Q96P50 834 aa8.88□□□□□ -0.99
C2CD3-215ENST00000540452 MMS19Q96T76 1030 aa8.88□□□□□ -0.99
C2CD3-215ENST00000540452 MTG1Q9BT17 334 aaPredicted RBP8.88□□□□□ -0.99
C2CD3-215ENST00000540452 PARD6BQ9BYG5 372 aa8.88□□□□□ -0.99
C2CD3-215ENST00000540452 MTMR12Q9C0I1 747 aa8.88□□□□□ -0.99
C2CD3-215ENST00000540452 MIS12Q9H081 205 aa8.88□□□□□ -0.99
C2CD3-215ENST00000540452 THAP2Q9H0W7 228 aa8.88□□□□□ -0.99
C2CD3-215ENST00000540452 LHX5Q9H2C1 402 aa8.88□□□□□ -0.99
C2CD3-215ENST00000540452 SLITRK6Q9H5Y7 841 aa8.88□□□□□ -0.99
C2CD3-215ENST00000540452 FLRT1Q9NZU1 646 aa8.88□□□□□ -0.99
C2CD3-215ENST00000540452 TMEM59LQ9UK28 342 aa8.88□□□□□ -0.99
C2CD3-215ENST00000540452 STRIP2Q9ULQ0 834 aa8.88□□□□□ -0.99
C2CD3-215ENST00000540452 TFR2Q9UP52 801 aa8.88□□□□□ -0.99
C2CD3-215ENST00000540452 THSD7BQ9C0I4 1608 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 C17orf102A2RUQ5 167 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 GPR25O00155 361 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 SEPT4O43236 478 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 ADCY6O43306 1168 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 BUB1BO60566 1050 aaPredicted RBP8.87□□□□□ -0.99
C2CD3-215ENST00000540452 CAND2O75155 1236 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 CABYRO75952 493 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 CALB1P05937 261 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 MMEP08473 750 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 PNMA6AP0CW24 399 aaPredicted RBP8.87□□□□□ -0.99
C2CD3-215ENST00000540452 CYP2C9P11712 490 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 KRT5P13647 590 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 ZSCAN20P17040 1043 aaPredicted RBP8.87□□□□□ -0.99
C2CD3-215ENST00000540452 CYP3A5P20815 502 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 CTNNA2P26232 953 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 HOXD10P28358 340 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 USP8P40818 1118 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 TNFSF9P41273 254 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 NSFP46459 744 aaKnown RBP8.87□□□□□ -0.99
C2CD3-215ENST00000540452 YARSP54577 528 aaKnown RBP8.87□□□□□ -0.99
C2CD3-215ENST00000540452 IGBP1P78318 339 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 INCA1Q0VD86 236 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 TMEM132DQ14C87 1099 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 ARHGEF6Q15052 776 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 XKR4Q5GH76 650 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 ZNF667Q5HYK9 610 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 ZBTB41Q5SVQ8 909 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 TMEM63BQ5T3F8 832 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 MON1BQ7L1V2 547 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 RSPH3Q86UC2 560 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 EFCAB13Q8IY85 973 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 MCOLN2Q8IZK6 566 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 RBBP8NLQ8NC74 664 aaPredicted RBP8.87□□□□□ -0.99
C2CD3-215ENST00000540452 CXorf38Q8TB03 319 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 SLC20A1Q8WUM9 679 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 MAIP1Q8WWC4 291 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 KAT5Q92993 513 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 SCLT1Q96NL6 688 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.87□□□□□ -0.99
C2CD3-215ENST00000540452 FAM129AQ9BZQ8 928 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 ACBD3Q9H3P7 528 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 ANKZF1Q9H8Y5 726 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 VIPAS39Q9H9C1 493 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 APOBEC3GQ9HC16 384 aaKnown RBP8.87□□□□□ -0.99
C2CD3-215ENST00000540452 CHST12Q9NRB3 414 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 SEPT11Q9NVA2 429 aaKnown RBP8.87□□□□□ -0.99
C2CD3-215ENST00000540452 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.87□□□□□ -0.99
C2CD3-215ENST00000540452 CNTN3Q9P232 1028 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 HDAC6Q9UBN7 1215 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 PUF60Q9UHX1 559 aaKnown RBP8.87□□□□□ -0.99
C2CD3-215ENST00000540452 NUB1Q9Y5A7 615 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 PCDHB4Q9Y5E5 795 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 SQORQ9Y6N5 450 aa8.87□□□□□ -0.99
C2CD3-215ENST00000540452 TTLL13PA6NNM8 815 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms