RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 ZFP14Q9HCL3 533 aa13.12□□□□□ -0.31
CBX3P4-202ENST00000540428 TRPV5Q9NQA5 729 aa13.12□□□□□ -0.31
CBX3P4-202ENST00000540428 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.12□□□□□ -0.31
CBX3P4-202ENST00000540428 KCND2Q9NZV8 630 aa13.12□□□□□ -0.31
CBX3P4-202ENST00000540428 AFF4Q9UHB7 1163 aaKnown RBP13.12□□□□□ -0.31
CBX3P4-202ENST00000540428 PP2D1A8MPX8 630 aa13.11□□□□□ -0.31
CBX3P4-202ENST00000540428 H0YCG3 227 aa13.11□□□□□ -0.31
CBX3P4-202ENST00000540428 MAN2B1O00754 1011 aa13.11□□□□□ -0.31
CBX3P4-202ENST00000540428 MEFVO15553 781 aaPredicted RBP13.11□□□□□ -0.31
CBX3P4-202ENST00000540428 SEC24AO95486 1093 aa13.11□□□□□ -0.31
CBX3P4-202ENST00000540428 PLS3P13797 630 aa13.11□□□□□ -0.31
CBX3P4-202ENST00000540428 CD72P21854 359 aa13.11□□□□□ -0.31
CBX3P4-202ENST00000540428 MCM4P33991 863 aa13.11□□□□□ -0.31
CBX3P4-202ENST00000540428 EPHA5P54756 1037 aa13.11□□□□□ -0.31
CBX3P4-202ENST00000540428 ARPP19P56211 112 aa13.11□□□□□ -0.31
CBX3P4-202ENST00000540428 MCL1Q07820 350 aa13.11□□□□□ -0.31
CBX3P4-202ENST00000540428 ADCY1Q08828 1119 aa13.11□□□□□ -0.31
CBX3P4-202ENST00000540428 PUM1Q14671 1186 aaKnown RBP eCLIP13.11□□□□□ -0.31
CBX3P4-202ENST00000540428 IL17AQ16552 155 aa13.11□□□□□ -0.31
CBX3P4-202ENST00000540428 SLC10A6Q3KNW5 377 aa13.11□□□□□ -0.31
CBX3P4-202ENST00000540428 FAM78AQ5JUQ0 283 aa13.11□□□□□ -0.31
CBX3P4-202ENST00000540428 KCNK18Q7Z418 384 aa13.11□□□□□ -0.31
CBX3P4-202ENST00000540428 GPR161Q8N6U8 529 aaKnown RBP13.11□□□□□ -0.31
CBX3P4-202ENST00000540428 SYT2Q8N9I0 419 aaPredicted RBP13.11□□□□□ -0.31
CBX3P4-202ENST00000540428 TMEM161BQ8NDZ6 487 aa13.11□□□□□ -0.31
CBX3P4-202ENST00000540428 BEST2Q8NFU1 509 aa13.11□□□□□ -0.31
CBX3P4-202ENST00000540428 DEPDC1BQ8WUY9 529 aa13.11□□□□□ -0.31
CBX3P4-202ENST00000540428 DDX12PQ92771 950 aa13.11□□□□□ -0.31
CBX3P4-202ENST00000540428 KCNN1Q92952 543 aa13.11□□□□□ -0.31
CBX3P4-202ENST00000540428 IRF7Q92985 503 aa13.11□□□□□ -0.31
CBX3P4-202ENST00000540428 C18orf25Q96B23 403 aaPredicted RBP13.11□□□□□ -0.31
CBX3P4-202ENST00000540428 ZBTB45Q96K62 511 aaPredicted RBP13.11□□□□□ -0.31
CBX3P4-202ENST00000540428 ZNF512Q96ME7 567 aaPredicted RBP13.11□□□□□ -0.31
CBX3P4-202ENST00000540428 ASB16Q96NS5 453 aa13.11□□□□□ -0.31
CBX3P4-202ENST00000540428 IER2Q9BTL4 223 aa13.11□□□□□ -0.31
CBX3P4-202ENST00000540428 FAM126AQ9BYI3 521 aaPredicted RBP13.11□□□□□ -0.31
CBX3P4-202ENST00000540428 PRMT8Q9NR22 394 aaPredicted RBP13.11□□□□□ -0.31
CBX3P4-202ENST00000540428 HEBP1Q9NRV9 189 aa13.11□□□□□ -0.31
CBX3P4-202ENST00000540428 ZSCAN32Q9NX65 697 aa13.11□□□□□ -0.31
CBX3P4-202ENST00000540428 PCDHB8Q9UN66 801 aa13.11□□□□□ -0.31
CBX3P4-202ENST00000540428 KIF3AQ9Y496 699 aa13.11□□□□□ -0.31
CBX3P4-202ENST00000540428 NOTCH4Q99466 2003 aa13.11□□□□□ -0.31
CBX3P4-202ENST00000540428 FANCMQ8IYD8 2048 aa13.1□□□□□ -0.31
CBX3P4-202ENST00000540428 OTOGLQ3ZCN5 2332 aa13.1□□□□□ -0.31
CBX3P4-202ENST00000540428 DCHS1Q96JQ0 3298 aa13.1□□□□□ -0.31
CBX3P4-202ENST00000540428 SHISA7A6NL88 538 aa13.1□□□□□ -0.31
CBX3P4-202ENST00000540428 CLDN3O15551 220 aa13.1□□□□□ -0.31
CBX3P4-202ENST00000540428 LILRB5O75023 590 aa13.1□□□□□ -0.31
CBX3P4-202ENST00000540428 MAPTP10636 758 aaKnown RBP13.1□□□□□ -0.31
CBX3P4-202ENST00000540428 HARSP12081 509 aaKnown RBP13.1□□□□□ -0.31
CBX3P4-202ENST00000540428 SCP2P22307 547 aa13.1□□□□□ -0.31
CBX3P4-202ENST00000540428 MARCKSP29966 332 aaPredicted RBP13.1□□□□□ -0.31
CBX3P4-202ENST00000540428 CDC25AP30304 524 aa13.1□□□□□ -0.31
CBX3P4-202ENST00000540428 LRPAP1P30533 357 aa13.1□□□□□ -0.31
CBX3P4-202ENST00000540428 CCR2P41597 374 aa13.1□□□□□ -0.31
CBX3P4-202ENST00000540428 CSTF1Q05048 431 aaKnown RBP13.1□□□□□ -0.31
CBX3P4-202ENST00000540428 FZD5Q13467 585 aa13.1□□□□□ -0.31
CBX3P4-202ENST00000540428 RILPL1Q5EBL4 403 aa13.1□□□□□ -0.31
CBX3P4-202ENST00000540428 MAMSTRQ6ZN01 415 aa13.1□□□□□ -0.31
CBX3P4-202ENST00000540428 DGLUCYQ7Z3D6 616 aa13.1□□□□□ -0.31
CBX3P4-202ENST00000540428 ATRIPQ8WXE1 791 aa13.1□□□□□ -0.31
CBX3P4-202ENST00000540428 SMARCD2Q92925 531 aa13.1□□□□□ -0.31
CBX3P4-202ENST00000540428 TCEAL4Q96EI5 215 aa13.1□□□□□ -0.31
CBX3P4-202ENST00000540428 TBC1D32Q96NH3 1257 aa13.1□□□□□ -0.31
CBX3P4-202ENST00000540428 TRMT61BQ9BVS5 477 aaKnown RBP13.1□□□□□ -0.31
CBX3P4-202ENST00000540428 GPR88Q9GZN0 384 aa13.1□□□□□ -0.31
CBX3P4-202ENST00000540428 BRD9Q9H8M2 597 aa13.1□□□□□ -0.31
CBX3P4-202ENST00000540428 TRPV4Q9HBA0 871 aa13.1□□□□□ -0.31
CBX3P4-202ENST00000540428 DLL3Q9NYJ7 618 aa13.1□□□□□ -0.31
CBX3P4-202ENST00000540428 ANKFY1Q9P2R3 1169 aa13.1□□□□□ -0.31
CBX3P4-202ENST00000540428 CACNA1IQ9P0X4 2223 aa13.1□□□□□ -0.31
CBX3P4-202ENST00000540428 SFI1A8K8P3 1242 aa13.09□□□□□ -0.31
CBX3P4-202ENST00000540428 M0QZQ0 153 aa13.09□□□□□ -0.31
CBX3P4-202ENST00000540428 MOSPD3O75425 235 aa13.09□□□□□ -0.31
CBX3P4-202ENST00000540428 OAZ2O95190 189 aa13.09□□□□□ -0.31
CBX3P4-202ENST00000540428 CLTAP09496 248 aa13.09□□□□□ -0.31
CBX3P4-202ENST00000540428 CPB1P15086 417 aa13.09□□□□□ -0.31
CBX3P4-202ENST00000540428 PSMC3P17980 439 aa13.09□□□□□ -0.31
CBX3P4-202ENST00000540428 CYP3A5P20815 502 aa13.09□□□□□ -0.31
CBX3P4-202ENST00000540428 AARSP49588 968 aaKnown RBP eCLIP13.09□□□□□ -0.31
CBX3P4-202ENST00000540428 SLC12A3P55017 1021 aa13.09□□□□□ -0.31
CBX3P4-202ENST00000540428 ATP2C1P98194 919 aaPredicted RBP13.09□□□□□ -0.31
CBX3P4-202ENST00000540428 YWHAHQ04917 246 aaPredicted RBP13.09□□□□□ -0.31
CBX3P4-202ENST00000540428 TWF1Q12792 350 aa13.09□□□□□ -0.31
CBX3P4-202ENST00000540428 PLD1Q13393 1074 aa13.09□□□□□ -0.31
CBX3P4-202ENST00000540428 KYAT1Q16773 422 aa13.09□□□□□ -0.31
CBX3P4-202ENST00000540428 MAP4K3Q8IVH8 894 aa13.09□□□□□ -0.31
CBX3P4-202ENST00000540428 ZNF687Q8N1G0 1237 aa13.09□□□□□ -0.31
CBX3P4-202ENST00000540428 DCLK2Q8N568 766 aa13.09□□□□□ -0.31
CBX3P4-202ENST00000540428 SECISBP2LQ93073 1101 aaKnown RBP13.09□□□□□ -0.31
CBX3P4-202ENST00000540428 E2F7Q96AV8 911 aa13.09□□□□□ -0.31
CBX3P4-202ENST00000540428 TSPAN18Q96SJ8 248 aa13.09□□□□□ -0.31
CBX3P4-202ENST00000540428 KIF2CQ99661 725 aa13.09□□□□□ -0.31
CBX3P4-202ENST00000540428 EPC1Q9H2F5 836 aa13.09□□□□□ -0.31
CBX3P4-202ENST00000540428 ZNF334Q9HCZ1 680 aaPredicted RBP13.09□□□□□ -0.31
CBX3P4-202ENST00000540428 ASAH2Q9NR71 780 aa13.09□□□□□ -0.31
CBX3P4-202ENST00000540428 CEP72Q9P209 647 aa13.09□□□□□ -0.31
CBX3P4-202ENST00000540428 LARSQ9P2J5 1176 aaKnown RBP13.09□□□□□ -0.31
CBX3P4-202ENST00000540428 TUBGCP4Q9UGJ1 667 aa13.09□□□□□ -0.31
CBX3P4-202ENST00000540428 UBQLN1Q9UMX0 589 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms