RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 SHROOM1Q2M3G4 852 aaPredicted RBP10.04□□□□□ -0.8
CTNNA1-243ENST00000540387 TTC38Q5R3I4 469 aa10.04□□□□□ -0.8
CTNNA1-243ENST00000540387 PRAMEF18Q5VWM3 479 aa10.04□□□□□ -0.8
CTNNA1-243ENST00000540387 KLHDC10Q6PID8 442 aa10.04□□□□□ -0.8
CTNNA1-243ENST00000540387 C1orf228Q6PIY5 440 aa10.04□□□□□ -0.8
CTNNA1-243ENST00000540387 PATL1Q86TB9 770 aaKnown RBP10.04□□□□□ -0.8
CTNNA1-243ENST00000540387 GLG1Q92896 1179 aa10.04□□□□□ -0.8
CTNNA1-243ENST00000540387 GFM2Q969S9 779 aaKnown RBP10.04□□□□□ -0.8
CTNNA1-243ENST00000540387 ROPN1BQ9BZX4 212 aaPredicted RBP10.04□□□□□ -0.8
CTNNA1-243ENST00000540387 DEFB129Q9H1M3 183 aa10.04□□□□□ -0.8
CTNNA1-243ENST00000540387 ROPN1Q9HAT0 212 aaPredicted RBP10.04□□□□□ -0.8
CTNNA1-243ENST00000540387 TCP11L1Q9NUJ3 509 aa10.04□□□□□ -0.8
CTNNA1-243ENST00000540387 PGAP2Q9UHJ9 254 aa10.04□□□□□ -0.8
CTNNA1-243ENST00000540387 KIAA0391O15091 583 aaKnown RBP10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 PGM3O95394 542 aa10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 PIM1P11309 404 aaPredicted RBP10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 RXRGP48443 463 aa10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 PTENP60484 403 aa10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 CYP4A11Q02928 519 aa10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 THOC5Q13769 683 aaKnown RBP10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 ADRM1Q16186 407 aa10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 RTN1Q16799 776 aa10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 NEDD1Q8NHV4 660 aa10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 RIN3Q8TB24 985 aa10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 BTBD10Q9BSF8 475 aa10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 ADARB2Q9NS39 739 aaKnown RBP10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 ADAMTS1Q9UHI8 967 aa10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 TSC22D4Q9Y3Q8 395 aa10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 NAV1Q8NEY1 1877 aa10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 PFASO15067 1338 aa10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 CCDC160A6NGH7 325 aa10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 FBP2O00757 339 aa10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 STRNO43815 780 aa10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 ADCY3O60266 1144 aa10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 HNRNPCL1O60812 293 aaKnown RBP10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 COPB2P35606 906 aa10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 KRT2P35908 639 aa10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 TNNI2P48788 182 aa10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 TRPC1P48995 793 aa10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 STRN3Q13033 797 aa10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 CAMK2BQ13554 666 aa10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 KIAA1755Q5JYT7 1200 aa10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 SPDYAQ5MJ70 313 aa10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 IFIT1BQ5T764 474 aaKnown RBP10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 NEPROQ6NW34 567 aa10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 C14orf80Q86SX3 495 aa10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 CASP10Q92851 521 aa10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 PRICKLE1Q96MT3 831 aaPredicted RBP10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 TEPSINQ96N21 525 aa10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 SAR1AQ9NR31 198 aa10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 GGA3Q9NZ52 723 aa10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 GRHL1Q9NZI5 618 aa10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 ZFP69BQ9UJL9 534 aa10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 STX8Q9UNK0 236 aa10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 TIMM22Q9Y584 194 aa10.03□□□□□ -0.8
CTNNA1-243ENST00000540387 BTNL10A8MVZ5 291 aa10.02□□□□□ -0.8
CTNNA1-243ENST00000540387 CCDC22O60826 627 aa10.02□□□□□ -0.8
CTNNA1-243ENST00000540387 STK10O94804 968 aaKnown RBP10.02□□□□□ -0.8
CTNNA1-243ENST00000540387 OXSR1O95747 527 aaPredicted RBP10.02□□□□□ -0.8
CTNNA1-243ENST00000540387 FGGP02679 453 aa10.02□□□□□ -0.8
CTNNA1-243ENST00000540387 ARPC4P59998 168 aa10.02□□□□□ -0.8
CTNNA1-243ENST00000540387 TBL3Q12788 808 aaKnown RBP10.02□□□□□ -0.8
CTNNA1-243ENST00000540387 TNFAIP1Q13829 316 aa10.02□□□□□ -0.8
CTNNA1-243ENST00000540387 RRP1BQ14684 758 aaKnown RBP10.02□□□□□ -0.8
CTNNA1-243ENST00000540387 TATDN1Q6P1N9 297 aa10.02□□□□□ -0.8
CTNNA1-243ENST00000540387 ARHGEF18Q6ZSZ5 1173 aa10.02□□□□□ -0.8
CTNNA1-243ENST00000540387 PEX26Q7Z412 305 aa10.02□□□□□ -0.8
CTNNA1-243ENST00000540387 CLEC10AQ8IUN9 316 aa10.02□□□□□ -0.8
CTNNA1-243ENST00000540387 FAM186BQ8IYM0 893 aa10.02□□□□□ -0.8
CTNNA1-243ENST00000540387 C10orf82Q8WW14 230 aa10.02□□□□□ -0.8
CTNNA1-243ENST00000540387 PRPF31Q8WWY3 499 aaKnown RBP10.02□□□□□ -0.8
CTNNA1-243ENST00000540387 CEP95Q96GE4 821 aa10.02□□□□□ -0.8
CTNNA1-243ENST00000540387 ZMAT2Q96NC0 199 aaKnown RBP10.02□□□□□ -0.8
CTNNA1-243ENST00000540387 EDEM3Q9BZQ6 932 aa10.02□□□□□ -0.8
CTNNA1-243ENST00000540387 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.02□□□□□ -0.8
CTNNA1-243ENST00000540387 EMILIN3Q9NT22 766 aa10.02□□□□□ -0.8
CTNNA1-243ENST00000540387 EURLQ9NYK6 297 aa10.02□□□□□ -0.8
CTNNA1-243ENST00000540387 PPP1R9AQ9ULJ8 1098 aa10.02□□□□□ -0.8
CTNNA1-243ENST00000540387 PHTF1Q9UMS5 762 aa10.02□□□□□ -0.8
CTNNA1-243ENST00000540387 STXBP5LQ9Y2K9 1186 aa10.02□□□□□ -0.8
CTNNA1-243ENST00000540387 DDX60LQ5H9U9 1706 aaKnown RBP10.02□□□□□ -0.81
CTNNA1-243ENST00000540387 FAM187AA6NFU0 413 aa10.02□□□□□ -0.81
CTNNA1-243ENST00000540387 POTECB2RU33 542 aa10.02□□□□□ -0.81
CTNNA1-243ENST00000540387 GDF11O95390 407 aa10.02□□□□□ -0.81
CTNNA1-243ENST00000540387 ANPEPP15144 967 aa10.02□□□□□ -0.81
CTNNA1-243ENST00000540387 AMPD1P23109 780 aa10.02□□□□□ -0.81
CTNNA1-243ENST00000540387 ATP5DP30049 168 aa10.02□□□□□ -0.81
CTNNA1-243ENST00000540387 DRG2P55039 364 aaKnown RBP10.02□□□□□ -0.81
CTNNA1-243ENST00000540387 COG7P83436 770 aa10.02□□□□□ -0.81
CTNNA1-243ENST00000540387 DNAJC3Q13217 504 aa10.02□□□□□ -0.81
CTNNA1-243ENST00000540387 HNRNPDQ14103 355 aaKnown RBP10.02□□□□□ -0.81
CTNNA1-243ENST00000540387 SPIDRQ14159 915 aa10.02□□□□□ -0.81
CTNNA1-243ENST00000540387 INAQ16352 499 aa10.02□□□□□ -0.81
CTNNA1-243ENST00000540387 MAN2A1Q16706 1144 aa10.02□□□□□ -0.81
CTNNA1-243ENST00000540387 EXOC3L4Q17RC7 722 aa10.02□□□□□ -0.81
CTNNA1-243ENST00000540387 CTC1Q2NKJ3 1217 aa10.02□□□□□ -0.81
CTNNA1-243ENST00000540387 NAALADL2Q58DX5 795 aa10.02□□□□□ -0.81
CTNNA1-243ENST00000540387 DLK2Q6UY11 383 aa10.02□□□□□ -0.81
CTNNA1-243ENST00000540387 TMTC3Q6ZXV5 915 aa10.02□□□□□ -0.81
CTNNA1-243ENST00000540387 JAMLQ86YT9 394 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms